Array 1 1835025-1835866 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235948.1 Oscillatoria sp. PCC 10802 Osc10802DRAFT_Contig7.7, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 1835025 35 100.0 36 ................................... CTCTTGTAAGAAAGAGGTAACTTGGGACAAAAAACG 1835096 35 100.0 40 ................................... GTTCAACCGTTCTCCTCTCGGACGGTAGCCAGCATTTCAT 1835171 35 100.0 41 ................................... CTGGAAATCCTCCCGCAGGTTTCCGCCATCTGGGATAAACG 1835247 35 100.0 32 ................................... CCTCATAAACTAACCCCTCAAGACATGATTGG 1835314 35 100.0 39 ................................... TTGAAGCACCAAGACACTCGGATGCAAAAATTCTAACTG 1835388 35 100.0 39 ................................... ACCAGAAAACAACCAGTATCGTGAATTATCTCAGGAGGA 1835462 35 100.0 38 ................................... AGTAGGAAATTGTCATGGAAACCCATCAACCGACAGAA 1835535 35 100.0 40 ................................... CTGTGGTAGATGGTCGCAAGATATGTGAGCTACAAGAAAA 1835610 35 100.0 37 ................................... TTTTTGCAGGAGTCCCTTGGGGATGGCTCCGTCAAAG 1835682 35 100.0 41 ................................... CGCTAGTGGGAAATTGTTCTACAACCAGAATGGTGCAGTGG 1835758 35 100.0 39 ................................... ATTCAAATAACGCCCAAGTGACCTTTAAAATTCCTGATG 1835832 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================= ================== 12 35 100.0 38 GTTTCCATTAATTCGACTTCCGGGCGGAAGCCAAG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNCAAACTCAGCCCACCGGCACGTAATATTGAACTTCTTGAAACCCGCGAAGGCGGGTTTCGTCTGTGTAGCTGCGGTTTCTAACCGCCAAGCACCCCGGCGTTTTAGCGATAGATACCCGGCGTTTTACCGATAGATACCCGGCGTTTTACCGATAGATACCCGGCGTTTTACCGATAGATACCCGGCGTTTTACCGATAATCCCCGGCGATTATAAATCGCGGCTATACAAACGAAGTCCGCCTTCGCGGACTTCAGAAATCCCGATTTGAGGAAAAGACACCGGCAATTGGAAATTCCCTGCGACAAACTCAGCCCACCGGCACGTAATATTGAACTTCTTGAAACCCGCGCAGGCGGGTTTCGTCTGTGTAGCTGCGTTTTCTAACCGCCAAGCCCCTTCAGAAATCCCGCTTTCGGGAAAGAGACACCGGCAATTGGAAATTCCCTGTGACACCTCCATCCTTCCCAACG # Right flank : GAGCAGGCTCTGGAAGCCTACCGCTGACAGCAGTCTACCACACTTTTTCGCGGGGGGTCAAATTTTGGGGGAAACACTGCGAATAGTTCTCAACAAGCATAGAGTCTCGAAGCTTCAAATCCAGACGGGGAGAGCGATTCGCGGGGGTCTGCCACAGAATAAGGAATTCAGCTCCCGCCCAACCCCCGCGAAAGAATTCTCGGCAGAGAAAAATCCCTGCCCCACCGGCACCAGAGATTGAGAGCGGGAGGAATGGCCAACCCTCAATCTCCTGAAGCAAAATTACTTGCTCCAGATCATCGGGCGATACACCGGCACCTCACTGATCAAACAAGCCGCATATTCCCGCACCTGCAACTCAAGACAGCGGCGGAAGCTGACCTTATATCCAGTATGCGGGTGAGTCAGCTGAGACTGCAACTTCTCCTCCCAGTGCTTGAGAAACTTCTTAAGCGCGTCAGGGTGCAAATAGACGCCGCCCCACTCGTCAGGCGGAGTGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTAATTCGACTTCCGGGCGGAAGCCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 3346050-3338527 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235948.1 Oscillatoria sp. PCC 10802 Osc10802DRAFT_Contig7.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 3346049 36 97.2 35 ................................T... GCTTCAAACGGGAACTCGTGTCAGGGAGGTCGGAG 3345978 36 100.0 34 .................................... GGATGAAACTCCAGAAAAATCGACAACAAAAATC 3345908 36 100.0 36 .................................... GAGAGGCGGAGTCAGATTCCTCGGCTGGATACAGCT 3345836 36 100.0 40 .................................... GGGGCTCTAATTTGTGGCGTAAATGCTGGTTTTTCTCAAG 3345760 36 100.0 34 .................................... GTCTTATATTTGCTGTCCAATAAGTTGCTGATTG 3345690 36 100.0 36 .................................... GATTCCAACCTTTTTTCCTGCTGCAAATCAGCCCAA 3345618 36 100.0 38 .................................... TACATCTGTTCGAAACCTGAGTAGTAGGGCTCGGGGTA 3345544 36 100.0 40 .................................... CTACGACGGGGCCGCCTGGCAAAACTGTTGGTAATTATTT 3345468 36 100.0 36 .................................... GAGAGGCGGAGTCAGATTCCTCGGCTGGATACAGCT 3345396 36 100.0 40 .................................... GGGGCTCTAATTTGTGGCGTAAATGCTGGTTTTGCTCAAG 3345320 36 100.0 34 .................................... GTCTTATATTTGCTGTCCAATAAGTTGCTGATTG 3345250 36 100.0 36 .................................... GATTCCAACCTTTTTTCCTGCTGCAAATCAGCCCAA 3345178 36 100.0 36 .................................... ATAGAGGATACCCAAGAATTTGCAGACATAGGACTT 3345106 36 100.0 36 .................................... AGAAATCCCCTTCAAGCTAGTGGTCGGTGGGTATGT 3345034 36 100.0 35 .................................... AACACTGTCTTTGCTCATACACGGCAACTCTAAGA 3344963 36 100.0 35 .................................... TTGAAGATTTCGCCGAAGATTTCGCCAGTGAACAA 3344892 36 100.0 36 .................................... GTAGCAAGACAAAAAGCTCCTTGCACAACGGTTACG 3344820 36 100.0 37 .................................... TTGCTGTCAACAATCTTAACTTTAGGCGGAATTGGGT 3344747 36 100.0 36 .................................... GCTGCAAAACCGGCACTGAGCAGGCAGGCCGCATTC 3344675 36 100.0 35 .................................... TCCGGAGAAAAATCTCCGGGAAATGATTGAAAATT 3344604 36 100.0 36 .................................... CGGCTAACCTTAATCCAGTTTCCTCGCTACGAGCGT 3344532 36 100.0 36 .................................... TGTTGGTTTCTCCTGTCTTTCACCAGTGAAAAAGTT 3344460 36 100.0 36 .................................... CTTTTGACAAAGTTTCCTATTGGGATGTAATTTCAG 3344388 36 100.0 39 .................................... ATGGTTTAGGAAGGCGAAGTTACACGCTTCAAAACCTGG 3344313 36 100.0 36 .................................... GACTCTGGTGTCAGGATTCTTTCTTGGGCTGGAGAC 3344241 36 100.0 35 .................................... CCTGTCTGCCGGTGGTGGCGCGCTGCGAATGGCGA 3344170 36 100.0 34 .................................... CTCAAGCAGCACCCACTCCCGCATCTGCACCGGC 3344100 36 100.0 36 .................................... GGACGGGGCGTTCTTCGTAGGATGGTGGTTGATTTA 3344028 36 100.0 37 .................................... GTAAGTGAGCATGCCTCGCTTCCGACAGCTTTTGGTG 3343955 36 100.0 34 .................................... GCCACGGCTACGTCCTCCTTCTTTACCTGTGATT 3343885 36 100.0 36 .................................... GAATTTCACGATTGGAATCTGAACAGCGCCTATCCG 3343813 36 100.0 36 .................................... TATATCCTCTTGTTTTGTTTGGTAAAACAAAGGGAC 3343741 36 97.2 35 .................................T.. ATCCAAACTAGCCATCACTGCAAATCATCCTTTTC 3343670 36 100.0 37 .................................... AAGTAAAAGGGCAGAAAGGTTTTCTGCCCTTTACCTA 3343597 36 97.2 35 ...........................T........ GTATGTATACGACTAGATTCTTTGGCTTCCGGAAA 3343526 36 97.2 35 ................................A... GGATCAATAGCCCCCTTTCCTGGCTGGTAAACTTC 3343455 36 100.0 39 .................................... CAGCAAATAATGTGCCACTTTTTTTAAGGAAAGCCTTGA 3343380 36 100.0 38 .................................... TGTTTAACGGACAAGCCGTTTACCCAATTTCGTGCCAG 3343306 36 100.0 39 .................................... ACTAGAAAGCAAGTCGCGGCGGCTCTCGACCAGTACCTC 3343231 36 97.2 37 ................................A... GACGCTCTTTCTTGCAGTGGCCCACGCGGAAAATTCT 3343158 36 88.9 35 ...TC.CA............................ GAAACTTTGCGGAAAATTTTGACAGGAAATATGGT 3343087 36 88.9 35 ...TC.CA............................ CCAAAGGCTTGCTAAATTCAGTTAAATCAGGACTG 3343016 36 88.9 36 ...TC.CA............................ TGCACAGAGACAGAAAATGGGCAACAAAAATAAACT 3342944 36 88.9 39 ...TC.CA............................ TGGCCCATTTCTCACCTCAGCTTGGACTGGTTTAGTTTC 3342869 36 88.9 37 ...TC.CA............................ CTTAGCTGCTTCAGCCACTCCGCACGCGCCGGTAGAT 3342796 36 86.1 37 A..TC.CA............................ ATTCAGTTTCCTCGCTACGAGCCCGTGTCGTATTCAA 3342723 36 88.9 36 ...TC.CA............................ CCGTTTTGCGAAAGCAATTCTTACTGCTAGAGAACC 3342651 36 88.9 36 ...TC.CA............................ ATCGGCTGGACAGACACGCCACAGCGCTTGCTTCTT 3342579 36 88.9 36 ...TC.CA............................ AACACAGCAGATTTGACTTTGGCCCGCGAGGATTTG 3342507 36 88.9 35 ...TC.CA............................ CTCGGGCGGAACGGGTTGATGCCGGTGGACTTTTC 3342436 36 88.9 36 ...TC.CA............................ GGCAATCGAAGTGAGGTTGCAAGAACCTGCGGGATT 3342364 36 88.9 35 ...TC.CA............................ TAATTTTTTTCGACTTGAGCCATCCACGCCGCTAA 3342293 36 88.9 34 ...TC.CA............................ ACTGTTTTATTGTCTTGATTCTACCCTAAAAACT 3342223 36 100.0 37 .................................... AATTGACGCTTACCCAGCCGCCAAGCCACCATGAAGA 3342150 36 100.0 37 .................................... TGCTGGATGCAAGTGTGTCAAACAATATCGTTCAGCT 3342077 36 100.0 37 .................................... CTTCGGTTTTTCTGATTTTGCTTTGGCCATTTTTAGT 3342004 36 100.0 35 .................................... GTACTGACACTTTTGAAGATGCTGTTACTGCTATC 3341933 36 97.2 37 ................................A... TTCGACGCAACTGTTAATCTAGCCAATAGTTTAGCTA 3341860 36 100.0 34 .................................... TTTTTACCTGGAAACAAAGTGAACCCAAAACTCT 3341790 36 100.0 34 .................................... GAAAGGATAGGTTGCTATTGGGCTATAGGCAGTT 3341720 36 97.2 36 ................................A... TGATTCAAACAAAAATACGATAATTGCAGGGTTTGA 3341648 36 100.0 35 .................................... CAGAAATCGAACGCTCTCTGCGCAACGGGGAGTCT 3341577 36 100.0 36 .................................... TTTAAGAGCGTGGGTGGTTCTTGGACAACTGCGTTA 3341505 36 97.2 38 ................................T... TAGTAATCATTGCGAATTTTGAGCAGCTCAGCCTGCCC 3341431 36 100.0 37 .................................... CTGATATGACACGACCTTTGTTATCGACTTCGATAGT 3341358 36 100.0 34 .................................... GGAATCAGGTATTCATCAGGTCATCAGGTACTCA 3341288 36 100.0 37 .................................... TGGCTATCGAGACGAACGCCGAGCAAGCCGAGGGGTC 3341215 36 100.0 35 .................................... AGCAATCTAACGGATGGACACTGAAAGACTGGATT 3341144 36 100.0 35 .................................... TCCCAAATATGCCCACAAAAAACACATTTTTTCTC 3341073 36 100.0 38 .................................... GGGATTCCTGATCTAACTGTGCCCACCTGTGATGAACT 3340999 36 100.0 35 .................................... AAATACTTCTATCGTCCCCTTCCGGAAAGAGAAAG 3340928 36 100.0 37 .................................... GGAATTGGTTGGTTACTGCTCAGGTGGGCAATCTTAG 3340855 36 97.2 37 ................................A... TCCGAAAAGCCGCACAGTTCAGCCGGCACAAGGATTT 3340782 36 100.0 36 .................................... TAAAAACAGCAATGACATGATATTGGTTTTCGGCAT 3340710 36 100.0 36 .................................... TGAGCGGCAACGAATGGAGTTACGGGAAGCCTATTT 3340638 36 100.0 38 .................................... CCTGGGTGAACGGTCGGGAAATTCCCAGGCTTTCTCCA 3340564 36 100.0 35 .................................... GATGTAGATTTCGGTTATATGGGTGCCGATAATGC 3340493 36 100.0 35 .................................... TTCCATATAGTTAAACGTTCTAGGTCAGAGAAGCC 3340422 36 100.0 36 .................................... ATTATATTCAGCGTCAGTCCTATAAGCTGAAAGACG 3340350 36 100.0 34 .................................... AGGTAACACTAATAATGTGGAAATGGATTCCGTT 3340280 36 100.0 39 .................................... CGGCAAGGCTTAGCAGACCATTACATCGCTAAAGCAAAG 3340205 36 97.2 35 ......................T............. TCTGTTCCTTCACCGGCGGGAGTTGAGCGGCGTCC 3340134 36 86.1 36 ...TC.CA..............T............. AAGGATATCTCACAGCCCAAACCCAAACCCACAAAA 3340062 36 86.1 36 ...TC.CA..............T............. ACCGGCTGATGGACTTTTGAGAGAAGAGCCTCATTT 3339990 36 86.1 40 ...TC.CA..............T............. GGTTCTCCAACCAGAAAACTTCTCTGGAGCGTATAATTCT 3339914 36 86.1 34 ...TC.CA..............T............. TCCTAAAACTTTCCGCCCGCATCTCCCCCCGCCT 3339844 36 86.1 34 ...TC.CA..............T............. CAAGTGCAATTGTCCCCCACGTGCCTGAACCTTT 3339774 36 86.1 36 ...TC.CA..............T............. TTCGTAGGGATGTCCATGTTCGTAGGGATGTCCATG 3339702 36 86.1 35 ...TC.CA..............T............. AAAGCACATTCAGAATAGTCCACAACAGTTTCCTC 3339631 36 83.3 35 ...TC.CA..............T.........A... CCGGTCGGTGAACGTGGAATTGGCGCAAGCGGTTC 3339560 36 83.3 36 ...TC.CA..............T.........A... CGCAACCACAACGGCTTCTGCCGCTGACTTGACTCG 3339488 36 83.3 36 ...TC.CA..............T.........A... CCGCTACCGCCGCCTGGACTCATGGCGCAGGCGCAA 3339416 36 86.1 35 ...TC.CA..............T............. CAGATCGCCCGAAAGCCGGCTTTCGTCTGGTAAAA 3339345 36 86.1 34 ...TC.CA..............T............. CCCATTGTGTTTGCTCTCCTAATTTTGCAAGCGA 3339275 36 86.1 35 ...TC.CA..............T............. GGGATAGGCGATGAAAAAACACGTGAATCAATAAA 3339204 36 86.1 34 ...TC.CA..............T............. AAGCATCTCGACTCCGCCAATCAAGCGGGGATCG 3339134 36 86.1 35 ...TC.CA..............T............. GGATCCTTCTAGAGCCGGGTGGCATCCACTCTTTT 3339063 36 86.1 38 ...TC.CA..............T............. CTCATAACGCTACTACACTGTCCGGCATTGGCTCGTTT 3338989 36 86.1 36 ...TC.CA..............T............. CGTCAAGAAGCTTGCTTTTTACCCAGTCAGCAGCTC 3338917 36 86.1 35 ...TC.CA..............T............. AATGCTGGATAACTCTGTTCTACGGATCGGCTAGC 3338846 36 86.1 36 ...TC.CA..............T............. GGATAGTTGCTGCAGACCACGACCAAGCCGTCGAAG 3338774 36 86.1 35 ...TC.CA..............T............. GCACTCATAAACTGTGCCGCAAAATACTCACGCTT 3338703 36 100.0 35 .................................... TGGGGGAGCTTTCCAACCTCAGGATTGGCGGGAAA 3338632 36 100.0 34 .................................... TTGGATTTTTGTCAGCACAAGATAAAGCTCTTTT 3338562 36 94.4 0 .......T..............T............. | ========== ====== ====== ====== ==================================== ======================================== ================== 105 36 95.6 36 CTGGACACACCTTTGATGCCGTAAGGCGTTGAGCAC # Left flank : AGGCGTTGAGCACTCAGCTCCAACAGCTTTCAGCAAAGCCTCAAGCCGCTGGACACACCTTTGATGCCGTAAGGCGTTGAGCACTCTTCTAGTTTAGCACGAAACCGATACTTTTGCTCAGGCTGGACACACCTTTGATGCCGTAAGGCGTTGAGCACGTCTTATATTTGCTGTCCAATAAGTTGCTGATTGCTGGACACACCTTTGATGCCGTAAGGCGTTGAGCACGATTCCAACCTTTTTTCCTGCTGCAAATCAGCCCAACTGGACACACCTTTGATGCCGTAAGGCGTTGAGCACTACATCTGTTCGAAACCTGAGTAGTAGGGCTCGGGGTACTGGACACACCTTTGATGCCGTAAGGCGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGTAAGTCCTTGGGTCATCGATCGGGTAT # Right flank : TTCGCAGGGTTGGTGAGCAATAGCTTGCCGCTTTTTTATAGGGCGTTCGGAGCGTTTGCAGATAATTATCCTTTCGCTAAAGTAATTGGCAGAAGTTTAGGTGACTGGAACCATGCAATGTGCTTCATGCGGCCATATTCGTGGTAGCAACGATCGATATAGTTTCTATCTGTAGTTAATGGATAGACCGTTACCTCGCTGAACAGATAACCTGTTTTTTAAATAACTGGTTTATTTATATATTTATTGCGCAAAAAAAAGAGGTTGTTCCTGTTATATAGCGAGCGGAAAACTGGTTTCTGATTAAATCTCTGGGTCAGCCGGCAAAAATTGTCTGAGAAACCCGGTTTCTTTGCCTCGGTCAATCGCGTGGGGAAGTCAGAACCCGGGTTTCTGATTAGACCTCTCTGTCCGCCGGCAAAAATTGTCTGAAAAACCCGGTTTCTTTGCCTCGGTCAATCGCGTGGGTAACTCAGAAACCGGGTTTATTAATAAACGAC # Questionable array : NO Score: 2.93 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGACACACCTTTGATGCCGTAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.10,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [4-4] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 3 3354358-3346250 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235948.1 Oscillatoria sp. PCC 10802 Osc10802DRAFT_Contig7.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 3354357 36 100.0 34 .................................... AAGCTTTCGGCGAATCTTACTCTACGGTAAAACG 3354287 36 100.0 35 .................................... TGAGTATCCTTCTGGCGTAGCTCAAACTTGGCTTC 3354216 36 100.0 35 .................................... TAAGTAAAAAAACCTTGACGCATTATCTACTTCAG 3354145 36 100.0 34 .................................... CGACTCCCCGCTCTTCTAGTGCGGCGATAGCAAA 3354075 36 100.0 35 .................................... AACTATAAGACTTCTCACGCAACAATAAAGTTACT 3354004 36 100.0 37 .................................... GAAATAGGAAAAGAAGGCATAACTAATGTTAGTGCTG 3353931 36 100.0 36 .................................... GGACAGTCACATCCAGATAAGCAGCAGCGCTCTCGC 3353859 36 100.0 37 .................................... TGGTGTAACTGAAATTACGTCCCAGTAGGACACTTTG 3353786 36 100.0 35 .................................... TGACCTACGACGCAAACGGCTCGACAATTGGAACG 3353715 36 100.0 35 .................................... AGCTGGCCGCTTTCATGATCGTAGTCGCCATTTGG 3353644 36 100.0 36 .................................... CCGGTGGCGCGGTGGCAGCAGCCAAGGGGTACTATC 3353572 36 100.0 36 .................................... ACGAGTGGGTGCGCCGCACGGTCCTGAAAAGTGTGG 3353500 36 100.0 34 .................................... AAAACCGCCAATTTTTTGAGATAGTCTTTCTCTT 3353430 36 100.0 34 .................................... TGCCATTCCCAGTAAAATTCGTCGGGAAGCAATC 3353360 36 100.0 31 .................................... GCTTGAGGAGTGCTATGCGCTTAGCTTCAAT 3353293 36 100.0 36 .................................... AAGGACAAGCCATGTCTTGCTACCTATTACTCTCTC 3353221 36 100.0 37 .................................... GCAATTACGGAAGTAAAACTTCTGGGGGAGAACGAAA 3353148 36 100.0 36 .................................... CTGAAGCGCTAAGGCAGGCTCTTGACTGGCTCGATG 3353076 36 100.0 36 .................................... TTTTAGTAAGTCATGCCCGCTAATGTCCTCAACACT 3353004 36 100.0 35 .................................... ACAGGCACTCCTGAAATAGCATAAACAGTTATGTA 3352933 36 100.0 35 .................................... AAATGGCGCAGGTAGTCGCAAGGCTCCCAGCCTTG 3352862 36 100.0 34 .................................... TGGTGAGTGCCGGCTCTGCGCTCGCAGGTGCCGA 3352792 36 100.0 34 .................................... CCTAAACCCAAGATGCAAAAAATCAATTGCGCTA 3352722 36 100.0 36 .................................... GACTGATTCCTTGGTTGTTGGGGCAAATTCAGCAGC 3352650 36 100.0 36 .................................... AAGATGCGGCCCGGTGCTGCGTCCGGTGCTGCCCAT 3352578 36 100.0 37 .................................... GGGGCAAACATTAGAAATACCAGGAGGAGTGGCGGAA 3352505 36 100.0 35 .................................... AATAGCTGCCGCCACTGCGACAAATTTTTACGCAA 3352434 36 100.0 34 .................................... CTCCCTGCTGCCGGTGGGGGCAGCTCTCCCCCAA 3352364 36 100.0 36 .................................... AGTTTCTAGGGGCAAGAGATCGGATGCGGTAAGCTA 3352292 36 100.0 36 .................................... AGCCCAGAGCCCTTCCGAGGAACACCGGCACTCAAC 3352220 36 100.0 38 .................................... GAATGGGATCGTCCGAGTCCAACTATCACTACCCAGCT 3352146 36 100.0 34 .................................... CCTTGACGAGCGCAGTAGATGTTACCGGTAAGCT 3352076 36 100.0 36 .................................... TCAACTTGGCCTGCCCAGTTGCAATCAGAACAGCCT 3352004 36 100.0 38 .................................... CCGGAAAGGAATTGCTAGTTTATGCCGGTGACGGAGAA 3351930 36 100.0 35 .................................... TATGGGCTCAAATCGCGACGAATGAGCGGGTGCGA 3351859 36 100.0 36 .................................... TGGGCCAGAATAAACGAAGCGTCATCGGCTGCCACG 3351787 36 100.0 35 .................................... CGCTCGATAGACGCCAATGCAAGCGTTCCAGCCGG 3351716 36 100.0 36 .................................... TCAACTTGCAGCCGCAAAAGGCCGCAATCGTCCAAC 3351644 36 100.0 36 .................................... GAGGATGGCTATTATGGCTGGTTTTGGTAATTATAT 3351572 36 100.0 35 .................................... CATGGAGACTTACAACACAAAAAAGCCCTTGGGCG 3351501 36 100.0 35 .................................... ATACCGGTGTTAACTGGGGGGTTAAGAAGAAGGGC 3351430 36 100.0 35 .................................... TAACAGCATATTGTATTCACCCGACCCTTCTGAAT 3351359 36 100.0 36 .................................... CTTCCGTTTCAGTTCCCTGTTTTTTTCACCACTTAT 3351287 36 100.0 34 .................................... GAATTCGCTGCCGGGGGCGAGTCTCCAGGACTGC 3351217 36 100.0 36 .................................... TCATACTAAAAACAGCGGTAAGACTTATCCCGCAGT 3351145 36 100.0 39 .................................... CCAGAAAGGATGGAGCATCATCCGCCACCGAATCCGACT 3351070 36 100.0 35 .................................... GGCCAGAGTGAGAGCTTTCCCCTGCCCCCTCACTC 3350999 36 100.0 35 .................................... TTTTTTGAAAAACCCTGTTTAAGGGTCGTATTTTC 3350928 36 100.0 35 .................................... TTCCGCCAGAAGTTACGATGGACTCTGAGCCCATA 3350857 36 100.0 35 .................................... GGTTACGAGGATGACGGCGATTCGGTGCCGGTAGA 3350786 36 100.0 35 .................................... GGATAGCACCAGTGATTCGAGTCCCGACTGGGAAG 3350715 36 97.2 35 ................................A... TCGATTCACTGAACCTGGACAAAAAAATATGGCCG 3350644 36 100.0 34 .................................... TCATAGATGAGCCACCAGCCTACGTCGTAGGTTC 3350574 36 100.0 35 .................................... TTGTTACGTCTCTTGCCCTCCTTGCACGATAGCTC 3350503 36 100.0 36 .................................... GATTAGACTTCCAGGAATACCTTCTTGGCGGCGAAT 3350431 36 100.0 34 .................................... CCCAAGTATCGGATTGACAGAGTTTCCTGGAAAT 3350361 36 97.2 34 ................................A... ATTGTTGCAGTGCTTGCAACTTGCACAGATAAGA 3350291 36 100.0 36 .................................... TCTACGCATGGGCTAAAGATTCGAAGTACCAATACC 3350219 36 100.0 35 .................................... CTTCTCTCCGTAGACCCCACCTGAAACGTACCATG 3350148 36 100.0 35 .................................... AAGGCATTGGCTCCCTTGTGCTTCCGTTTCAGTTC 3350077 36 100.0 36 .................................... TCAACGCGGCCTGATGCGCTTCCATCCGTATCAGTC 3350005 36 100.0 36 .................................... GGAGCCAAGAAGTTGACTGGTTCGACCCCAACGGAG 3349933 36 100.0 35 .................................... TACGCAGAAGGGTCTGGCGAGTATGACATGCTCAT 3349862 36 100.0 37 .................................... TTTGTACCTTCACCTAGAGGGAGACGTCTTCTAGGCT 3349789 36 100.0 36 .................................... TTCCAGTTAAAGTTGTACAGGAACACCCCGGCTTGC 3349717 36 100.0 35 .................................... GATACAGATCGCAAAAAAGCCGAAGCGCTTTGCTT 3349646 36 100.0 38 .................................... CGGGAATTTGGCAAGCCAGATTTGCATGCCGCTAAAGC 3349572 36 100.0 36 .................................... ATTCAACGGCATCAGCTTGTATGTGCGGAAAAGGGT 3349500 36 100.0 36 .................................... AGCGAGAGGGAGTCGATCTAATGCTGACGTGCGATC 3349428 36 100.0 37 .................................... AGGAGCGAAAAAAGCAAGTGTGGGGCCGTTTGGACTC 3349355 36 100.0 37 .................................... GCTATCCCCGACAGCGTATTGTTCTGTTTTAACTGCT 3349282 36 100.0 36 .................................... GCTTTCGTTGCCGCTGGTGGTTTCGGTCAAGAATCG 3349210 36 100.0 35 .................................... GTAGGAGGAGCTCTCTTTGGAGCAGGCAATGCTAT 3349139 36 100.0 35 .................................... ACTGCGAGTCCGTTGGCGATATCGGGGATTGTTAT 3349068 36 100.0 36 .................................... TTCCAAGCGTACTTAATGCCTCCAATGGTAACGTGC 3348996 36 97.2 36 ................................A... ATGCCATCCCTCCGGCATCAACACCTTGTTGCCCAG 3348924 36 100.0 36 .................................... CATTCAAAGCGAAAATACTTGGGCCCCAAAAAGTAG 3348852 36 100.0 37 .................................... AGGGCATCCTCAAACCCTGGATTGCAGCCCAGCTGTC 3348779 36 97.2 34 ............T....................... TCGTGTCCCTCCGCAAAGAGGGGATTGAAGTCGA 3348709 36 97.2 36 ............T....................... ACCTGCTCGCCAGATATTCGCGCTCAATTAACAATT 3348637 36 97.2 34 ............T....................... CTCAAAGGAAGGGGCCCTGCTATCGGCTGAAGTC 3348567 36 94.4 35 ............T...................A... TTATAAACCACTCGCGTTGTCGAAAGTAAGATTTC 3348496 36 97.2 35 ............T....................... AGACTCTAGGTGTTTCCTGTCTCGCAGTTTGACAG 3348425 36 97.2 35 ............T....................... ATAGGGGGCGGGGGTTTTACCTGCGGCCTGTTTCC 3348354 36 97.2 34 ............T....................... TAGTTTGCTGCACCGTCCAATTGAGTCCTTTATG 3348284 36 97.2 35 ............T....................... TAGAACAACTACTGGCATTTATAAAATTATCGAGC 3348213 36 97.2 35 ............T....................... GATTGTCAAGGCCATCTCGTTTTCATCCCAGATGT 3348142 36 97.2 35 ............T....................... AAATCGCCTCAAGAAATTCCTCAGGCAGTGCTAGA 3348071 36 97.2 35 ............T....................... ATTACCGGCGAGAGTCCAATTCCAAACTCTAGCTT 3348000 36 97.2 34 ............T....................... GAGGAGATTGAAACCGCCCGGGCGGCGGCTGAGA 3347930 36 97.2 39 ............T....................... CCAGTTCTTCCGCTTCGGTGCCAGTGGCCATTGCCACAA 3347855 36 97.2 34 ............T....................... GCAATCACAGCCGATTCGCTTACGACTTCTCCCC 3347785 36 97.2 36 ............T....................... GGCAGAAGCGGTACTACCTGTACCGGCCAGCCCACC 3347713 36 97.2 34 ............T....................... CCAGAAAGGATGGGGCGGGGTATCCCGCCCACAT 3347643 36 97.2 35 ............T....................... TATTATGCGGTTCGCAATTTGGCTTAGATACTTAC 3347572 36 97.2 34 ............T....................... TGAAGCGTTGTTTCAGGGGCATCTGTTGCAATTC 3347502 36 97.2 34 ............T....................... GGGATAGTGCGAGAGCGCCGGCACTCGGAAATTG 3347432 36 97.2 36 ............T....................... TTTTTCCCTCTGCTGTTTCAGAACTTCTTTAAGAAC 3347360 36 94.4 35 ............T...................A... TGGCTCCCGGAAGAAGGAGGTCTGGCAGTTGCTGA 3347289 36 97.2 37 ............T....................... GCTTAGGCTTCCAGGAATACCTTCTTGGCGGCGAATA 3347216 36 97.2 35 ............T....................... TCAGCTCCAACAGCTTTCAGCAAAGCCTCAAGCCG 3347145 36 97.2 34 ............T....................... TCTTCTAGTTTAGCACGAAACCAAAACGGCGGCT 3347075 36 97.2 34 ............T....................... CTCTTGGTCAGGGAGCGTCTGGTATCTCTCAGTC 3347005 36 97.2 37 ............T....................... TAAATTAAATAGATTAGATGGCCTTAAACACTTCTAT 3346932 36 97.2 37 ............T....................... CTATGCTTAAAGTGTTGCCCTGGAGATAAATATGGTT 3346859 36 97.2 35 ............T....................... GAAGTCACGATCCTACCCCTCTGGCTTAACTAAGT 3346788 36 97.2 36 ............T....................... ATTTCCAAGTAAGTCCTTGGGTCATCGATCGGGTAT 3346716 36 94.4 35 ............T...................T... GCTTCAAACGGGAACTCGTGTCAGGGAGGTCGGAG 3346645 36 97.2 37 ............T....................... GCTTAGGCTTCCAGGAATACCTTCTTGGCGGCGAATA 3346572 36 97.2 35 ............T....................... TCAGCTCCAACAGCTTTCAGCAAAGCCTCAAGCCG 3346501 36 97.2 38 ............T....................... TCTTCTAGTTTAGCACGAAACCGATACTTTTGCTCAGG 3346427 36 97.2 34 ............T....................... GTCTTATATTTGCTGTCCAATAAGTTGCTGATTG 3346357 36 97.2 36 ............T....................... GATTCCAACCTTTTTTCCTGCTGCAAATCAGCCCAA 3346285 36 97.2 0 ............T....................... | ========== ====== ====== ====== ==================================== ======================================= ================== 114 36 99.0 35 CTGGACACACCTCTGATGCCGTAAGGCGTTGAGCAC # Left flank : GCGCTGGCAGAAGGCTTACAAGCTGCTGCAAGGATATGGGGAGCGCCTGCAATATTCGATTTTCCGCTGTTGGCTGAGCCAGCGGGATCGGGAGAAGCTGCGCTGGGAGTTGGAGAGGGTTTTGGCGGCGGAGGACAGTCTGCTGCTGATCCGTTTGCCTAACCAGTGTGTGGAGGGGCTGCACGCTTATAACCGTGCTGGGGCGTGGCCGGTGGCCCAAGAGGGGTACAGGATTGTCTGAGGCAAGCACCTCTGGCTGTGAGGTGGCTGTGCCGGCACTGCCGGCGGGAAACTTCCAGCAGGTGTGCTTTTTGGGGTTTTTGGAGCGGTCAGGGGTGCTTGCAATTTGCTATAATGTAGGTGGGGTAAGGGTTTGAGAGGAGGGGATTTGCTGTGAGCCGGTGGTTTTGGAGGGATTTTGCTGTGCCGGTTGCTTTTCCGGAGAGGTGGTTGTATAATGGTGTACAGGCGGTTCTGGAGCAAGGGTTTCAGCCGGCGCT # Right flank : TACATCTGTTCGAAACCTGAGTAGTAGGGCTCGGGGTACTGGACACACCTTTGATGCCGTAAGGCGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGTAAGTCCTTGGGTCATCGATCGGGTATCTGGACACACCTTTGATGCCGTAAGGCGTTGATCACGCTTCAAACGGGAACTCGTGTCAGGGAGGTCGGAGCTGGACACACCTTTGATGCCGTAAGGCGTTGAGCACGGATGAAACTCCAGAAAAATCGACAACAAAAATCCTGGACACACCTTTGATGCCGTAAGGCGTTGAGCACGAGAGGCGGAGTCAGATTCCTCGGCTGGATACAGCTCTGGACACACCTTTGATGCCGTAAGGCGTTGAGCACGGGGCTCTAATTTGTGGCGTAAATGCTGGTTTTTCTCAAGCTGGACACACC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGACACACCTCTGATGCCGTAAGGCGTTGAGCAC # Alternate repeat : CTGGACACACCTTTGATGCCGTAAGGCGTTGAGCAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.50,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 4 3792500-3792662 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235948.1 Oscillatoria sp. PCC 10802 Osc10802DRAFT_Contig7.7, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================ ================== 3792500 28 100.0 35 ............................ GGATTTGAACCCCTTGCCTCTGCGGTGCCCGACAT 3792563 28 100.0 44 ............................ CCTAGCAAAAACCCCGGCCACGATGCCAGGGTTTTGCTGTCCCA 3792635 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ============================================ ================== 3 28 100.0 40 ACCTTTGATGCCGTAAGGCGTTGAGCAC # Left flank : TGCTAATATATTTTTTGGCAGCCAGAGAGCGGCGGACAAATGTCCTGGACAAGTGACCCTCGCCCTGGCCGCAGACTGCTTCGGGGAATTAGCTCAGTTGGTAGAGCGCTGCGATCGCACCGCAGAGGTAAGGAGTTCGACCCTCCTATTCTCCATGGGTTTTAGGCTGCAATTGGCAGAAAATTGGCAGAAAATTGGTAGAATTCTAGCAATTGCCGAAGAACGTATGGCCATTGGTTAGAGGTTTTGTCTCCAGTGGTCAGTGACACGGCAAGCCAGTAAAACTTCGCTTGGTTCTGGTTCGGGCCACACCGGTTTACCTCTTGGGGCATGGTCGGTGGCCCAAGAGGCGTATCGGATTGCCTGAGGCAAGCACCTCTGGCTGTGAAGTAGCTGTGCCGGCAGTCGGGGCGGAAAACTTCCAGCCGGTCTGCTTTTTGGGGTTTTTTGAGCGGTCAGGGGTGCTTGCAATTAGGTAGAATGTAGGTGGGTCTGTCCCA # Right flank : CAGCACAGCACAGCACAGCACAGCACAAACTCTGAGTGGAGCGCGCTCTCGTGGCTAGGTACTGGACACAAACGGGGCGCTCACTCAAAAGTGCCCTTCCGAGATGGCCGGCACCTTTGGCTGTTATAGCAGCAGTCATATTGGTTAGGACACTAATGGCATGGCGTATGGGGCATGGCGCATGGGGCATGGCGCATGGGGAAGACTCACAGCTTTTTGCGATGATGCCCAATGCCCAATGCCCAATGCCCAATGCCCAATGCCCACGTCCTAATCTAAGTGCATACTGCTATACCTGTCTGAGCTAATCTGAGCCGGCTTTCCCGAGTGCTAGCGTAACCGCTCTGCCAAGATTCAGCCTAAAGGAACAGGAAAATGAATCAAAAGATTTGTCAGGGGTGCGGTCAATCCTTTCCCGCAACTTTGGAGTTTTTTTTCCGAGATCCCAAGGGTCGTGAGGGCTTGAAAAGCCGATGCAAAACTTGTCTCTACGCCCAGAG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACCTTTGATGCCGTAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 5 6793721-6789872 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235948.1 Oscillatoria sp. PCC 10802 Osc10802DRAFT_Contig7.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 6793720 37 100.0 36 ..................................... AACTCTTCGAGCAGTATAGTTGTCGGCTGCGGGTTG 6793647 37 100.0 39 ..................................... TGGCGATCCTGAAGCACGATCACGTTTCGCGTTCCGGAA 6793571 37 100.0 36 ..................................... GAGCCGAAACAGGACTAAGACCGCCGGGGGGAGAAC 6793498 37 100.0 38 ..................................... TTCCTGGAGCCCGAGTGCAGGAGCTCCAGATCTCGTGC 6793423 37 100.0 39 ..................................... CGCTCGCAGCTGCCGGTGGTGCGCTCGCAGCTGCCGGCG 6793347 37 100.0 39 ..................................... TTGCGTGATAAATTGTGTCAGTCGTGGCACAGGCTACAA 6793271 37 100.0 35 ..................................... GCCAAATGGCAAAACCTGCCATAAGTGGTTCGTGT 6793199 37 100.0 35 ..................................... GATACAGGACTGGTTTGCCTCTTGCGTTGACCCGG 6793127 37 100.0 35 ..................................... GCGATGGACTTAGAACTGCTCCCCACAAGGCTTTG 6793055 37 100.0 36 ..................................... TTGTGCCCATCGCCCTCCCCGGCATCTGGATGGGGA 6792982 37 100.0 34 ..................................... TTCCTGCCTGACCTGCGCTTGCAGTCAACGCGGG 6792911 37 100.0 36 ..................................... AACCCAGATGGGACGCCCCACTGGGCCTCCTGCCCA 6792838 37 100.0 36 ..................................... GAGCCACTCGCAGAATTCGCGCCATTGGGCAAGTTC 6792765 37 100.0 36 ..................................... ACGCGCTTCCCAGGAATCCCAGAGCCAGCGCCGGTG 6792692 37 100.0 36 ..................................... TACCCAGGGCCACCTACCAAAGGTGGATCGCCGGGA 6792619 37 100.0 37 ..................................... AAACCAAAGGGGCCGTAAATGCCCATTTCTATCCTGG 6792545 37 100.0 36 ..................................... TTTTAATCAGGTTAGCCAGTTCTAGATTCAAAAGGG 6792472 37 100.0 36 ..................................... TGCTCCAGCTTCACCCGGGTTTCCGCCGCCGCCCGG 6792399 37 100.0 38 ..................................... TCTTTTAAGACTCTTAAACAAACAGCGCTCATTTAGAA 6792324 37 100.0 37 ..................................... TTATCGACCGATTGCAAGCCGCCTTACTCTGCCAGGG 6792250 37 100.0 36 ..................................... AATCTTTGTGCGAGCAACTTGAAAGATTTTCCTCTA 6792177 37 100.0 36 ..................................... AGCTAAGAGATGTTAGGGCACTGGCTTTTTACTATC 6792104 37 97.3 36 ....T................................ TCTTAGGTCGTCTAAACTGGGCAGCTTTTCTTCAGG 6792031 37 100.0 38 ..................................... TCTTTAACCTAGTTTTTTCAGCAACAGGAGGCTCTACG 6791956 37 100.0 37 ..................................... AAAAGTCCCTTCGCTATCAAGTATCTCTTCGCCAATA 6791882 37 100.0 36 ..................................... CGTCAATGTCGGGGACGGCTACAGCTGGCTTCGACA 6791809 37 100.0 37 ..................................... AACTACCTGCTCCGCCTCATCAAGAATAAGCGTCGCG 6791735 37 100.0 42 ..................................... GAGCCGTCCCCGATGATCCCCACTGCACGCCGGCGCACCCAG 6791656 37 100.0 37 ..................................... TTAAATAAGCAAAAGTTTTAATTAAATTTTGCACAGG 6791582 37 100.0 36 ..................................... ACGCCAATTTCGGCCTTCCATGTTATGGACTGTATG 6791509 37 100.0 35 ..................................... TCAGAACTTCTATTGCGAGCGGAAGAGAGAGCCTG 6791437 37 100.0 36 ..................................... AGGCGCTCCAAGGGAGGCTGCGGGGATGACCGCAAG 6791364 37 100.0 37 ..................................... CGAGCAGCAGCTCATTGCGGCAGAAAAAGCGGTGGCG 6791290 37 100.0 35 ..................................... CCGGCTCGGGTGCCGACTCAACTTCCGGGCCCAGG 6791218 37 100.0 35 ..................................... AGCAGCAGGGTGCGCTTGCCTTCCGCCAAGTTTTC 6791146 37 100.0 36 ..................................... GCGCCAACAGGGTCGTCATCAAACCAGCCTTTAAGG 6791073 37 100.0 35 ..................................... CAGTCGCGGACGCGCGCCATCGCCTGCACAATTTC 6791001 37 100.0 36 ..................................... TTTGCTCTTGGTTTTCTGGCTGTCGCAGAGCCAGAG 6790928 37 100.0 37 ..................................... TTTGCACGTGAACTTTCACCCACGCCCAGAATCCGCC 6790854 37 100.0 35 ..................................... ACTTTACCCGACTAGCAATCGGGGCAGCCGGCCAA 6790782 37 100.0 36 ..................................... AACATCTACTCCGTTGAGCAAATAGCGAAGATATAT 6790709 37 100.0 35 ..................................... GGCCACGCTTGCAGCTTGGGCCAGACTAGTTTTAG 6790637 37 100.0 33 ..................................... TCGTAATACCTGAAGAGGAGAAGCGAGAAAGAG 6790567 37 100.0 37 ..................................... GGGAGAAAAAAAGCATTTTGCTCCTATTTTGGGGGCT 6790493 37 94.6 35 .........................T..........T CAGTATATATTCGTGGCGTAAAAGACTTCACCTCC 6790421 37 100.0 36 ..................................... GGCAGCACTGTCAAGCAAAAAACTGGCGCAAGGAGA 6790348 37 100.0 36 ..................................... AGCGAGCTCGCACGCCGCGTTGTAGACTGACTCGTG 6790275 37 100.0 38 ..................................... AGTGTCTTGCGGCTTGTCAACCGCCGGGAGTTCCTAGA 6790200 37 100.0 36 ..................................... AGAACGCTTAAAAGGTCTAGCGCCGAGGCTGAAATG 6790127 37 100.0 36 ..................................... TTTCCCAATCCCTGGATGGCGTCCTATCGAAGCTTG 6790054 37 100.0 36 ..................................... ATGATCCAGAACGATTAGGGACTTCGCTCTCTCCAG 6789981 37 100.0 36 ..................................... GTCGAGCGTTATAAAACGCTTCTGGGTCCGAATTAT 6789908 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 53 37 99.8 36 CTTTCCTATAGCTGAATCCCGGCAACGGGATTGAAAC # Left flank : AAACCACAAGTGTTGAATCTTAACAATTCGACATAAAAAAAGCGCCCAAAACGTGCTATGATTTGGGCTACGGTCAAATCAATCCTGTTAATAACCTGTGCTCAACTCATTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATAGCTATACAAATTTATGTTTCGCTGATAGCTTACCTGATATTAAAGATAGTAGATATTCCTAAAGAATGGGGGACTACGCTACTAGATAAACTCCGCTATCTTCAATGTTGTATGTGTCAAGAAATCAGCTATGTCCACTGGATAGAACGACTTCTCTCTGGCTAAGCATTTTTACTCAGGGCAGGATAAATGTAAGCTAAAATGTAAAGTTTTGTGACAGAATTCAACACTTGTGGATTGAAACAGGCACGCTCTTGACGGACGCAAAAAGATGCCTCATT # Right flank : AAACGACCTATCCGACGGCTCCCCACACCTGTCTCACACCACCGGCAACCCTTCCGACTCCACCGGCAACCGACTCCACCGGCAACGTCTCTTGGCGTATTAGCGGTCAAAAAAACGCCGGATCGCTACAATAAAACCAGTTTATTGTAACTTCACTGTTCCTTTATAGGAAAACACATTACCGCCGGCTTTCACAATCCAAAATCTTTGCATCCAGGCATCCAAAATCCAACCTTCAAAAATCCACCACCGGCAGCGTAAACCAAAACGTCGCCCCCGCACCTAGCGAGCTAATCACCCCAATCTTACCCCCGTGCGCCGCAATAATTTGCCGGCACAAATACAGCCCCAAACCCAAGCCGGTGGAGCGGCGTGTCTGGGAGCCGCGTGCGTAAAGTTCAAACAGCTCCTCGCACTGCTCCTCACTCATCCCCACCCCATTATCCTGCAGGGCGCAGCGAATCATCTGGGAATCCGATTGCTCCCCCTCACCCCCCTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCTATAGCTGAATCCCGGCAACGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.80,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 6 6796519-6794217 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235948.1 Oscillatoria sp. PCC 10802 Osc10802DRAFT_Contig7.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 6796518 37 100.0 36 ..................................... CTGGCTTTTAAGACCGTATCTTTTAAGACTCTTAAA 6796445 37 100.0 35 ..................................... CGTCGCGAACGAGCAGTAATCGGGGGATGGTAGGA 6796373 37 100.0 37 ..................................... CGCACACGCATTTAAGGAGACGAAAACAGATGGCACG 6796299 37 100.0 38 ..................................... CCCGTTTCGCTCCGGGGGCCTTAAGTCGTGCGAGCGGA 6796224 37 100.0 36 ..................................... ATTCATCGGGAGCCCTAACTTACGTGCTAGATGCAA 6796151 37 100.0 36 ..................................... TGGGCTGTATGCGACTCAAACAAAAATACGATAATT 6796078 37 100.0 36 ..................................... TATTCATGCTGTTTGGGTGTGAGTGAGGACTCCCGA 6796005 37 100.0 38 ..................................... GCTCAAACCTTGAACCTCTGAAGCGAGAATTGTTGTAT 6795930 37 100.0 36 ..................................... GGGAAAAATTCCAGCTAACGACCAAACTGCCCCCGA 6795857 37 100.0 36 ..................................... TTCAATCAATTGGCAACTCAATCGTCAGCATTCTGG 6795784 37 100.0 35 ..................................... AATGAATCGATAGCGACCGCAGGCCCCCGAAAGGG 6795712 37 100.0 35 ..................................... GAGCCCCCTCCCGAACCGCCGCTGGATTACTCTGG 6795640 37 100.0 35 ..................................... CAGGAACAGATCAGGAACGAACCCCCCGCACTCGA 6795568 37 100.0 37 ..................................... AGCAAAAATCTACTAAAACTAACAAAGACAGATTTTT 6795494 37 100.0 37 ..................................... CTGGATTTAAGACTTCGACTGGCTTGATCCGGTGGGG 6795420 37 97.3 38 A.................................... ATTTCGCTCCCGGTGCTGCACCGGCAGAGGAAGATCCG 6795345 37 100.0 35 ..................................... GCTGGCGTGCCGCCCGGGAAAGAGGTAGGGGTTCT 6795273 37 100.0 38 ..................................... CACTCCACCGGTCGCTTTTTCTCGGGCGCTCCTGGTAA 6795198 37 100.0 35 ..................................... GAAAATATGCGCAGTTAGCGAACCATCATTGAATC 6795126 37 100.0 36 ..................................... TAGCTAGTCTGTATCTGAACGCCGGCATCACGCAGA 6795053 37 100.0 36 ..................................... TATTATTGAAAATGTTGAGATGGCCCTGACCAAAGG 6794980 37 100.0 34 ..................................... CTTTGAGAGCCACCTCCCACGGGCTTCTGTAGGT 6794909 37 100.0 39 ..................................... CTCTAGCCAGCCCACAAAATTCTGGAAACAATAACTTCT 6794833 37 100.0 37 ..................................... CAGCCCTTCCTGAGGTTCTAGCTCCCCGGGGAACAGG 6794759 37 100.0 34 ..................................... ATGAACATGCCCTGGGGAGACAAAAAAGCTGTGG 6794688 37 100.0 37 ..................................... TTGCAAATGTTGCGTCGGATGGAGTCGGCGAGTCCAG 6794614 37 100.0 34 ..................................... CCGTAACAGTTTAGGCATGTTTACCCGACTAGCA 6794543 37 100.0 36 ..................................... ATGTGGCGGCTGCCGGTGTGCTGCCAGCTGGCAGCG 6794470 37 100.0 36 ..................................... CCGGCGGAAGAGGCAGAGCCTCAGGGGCGGGGGGTG 6794397 37 100.0 36 ..................................... CGCAAAGTTCTGTTTATCCTTGCGCCCCTGTTACAA 6794324 37 100.0 34 ..................................... CAGTGTGATCTCGGTGAGGCGGGACAGTGGCGGA 6794253 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 32 37 99.9 36 CTTTCCTATAGCTGAATCCCGGCAACGGGATTGAAAC # Left flank : TGTTTCGCTGATAGCTTACCTGATATTAAAGATAGTATATATTCCTAAAAAATGGGGGACTACGCTACTAGATAAACTCCGCTATCTTCAATGTTGTATGTGTCAAGAAATCAGCTATGTCCACTGGATAGAACGACTTCTCTCTGGCTAAGCATTTTTACTCAGGGCAGGATAAATGTAAGCTAAAATGTAAAGTTTTGTGACAGAATTCAACACTTGTGGATTGAAACAGGCACGCTCTTGACGGACGCAAAAAGATGCCTCATTCTTTCCTATAGCTGAATCCCGGCAACGGGATTGAAACAACTCTTCGAGCAGTATAGTTGTCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTATAGCTGAATCCCGGCAACGGGATTGAAACTCGCGTCGATTTTCCCCCCTGCGGTCAGCAATGGAA # Right flank : CACAAGTGTTGAATCTTAACAATTCGACATAAAAAAAGCGCCCAAAACGTGCTATGATTTGGGCTACGGTCAAATCAATCCTGTTAATAACCTGTGCTCAACTCATTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATAGCTATACAAATTTATGTTTCGCTGATAGCTTACCTGATATTAAAGATAGTAGATATTCCTAAAGAATGGGGGACTACGCTACTAGATAAACTCCGCTATCTTCAATGTTGTATGTGTCAAGAAATCAGCTATGTCCACTGGATAGAACGACTTCTCTCTGGCTAAGCATTTTTACTCAGGGCAGGATAAATGTAAGCTAAAATGTAAAGTTTTGTGACAGAATTCAACACTTGTGGATTGAAACAGGCACGCTCTTGACGGACGCAAAAAGATGCCTCATTCTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCTATAGCTGAATCCCGGCAACGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.80,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA // Array 7 6806212-6797237 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235948.1 Oscillatoria sp. PCC 10802 Osc10802DRAFT_Contig7.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================ ================== 6806211 37 100.0 36 ..................................... ATGAGCAGCCCCTGCCGGATATTGTGCCAATGCTTT 6806138 37 100.0 36 ..................................... ACAACACTATCGGCATCCAACCCTGTGGGGATGAGA 6806065 37 100.0 36 ..................................... CTAAATGGCCTGAGTGTTGGCGTAGATGTTTTCATG 6805992 37 100.0 36 ..................................... TGTTGACGTCACCCTACCGGCAACCTCTGCTCGAAC 6805919 37 100.0 36 ..................................... CGCGTCAGCAATCAGCAGGCGAGACAGTCCTGATTT 6805846 37 100.0 37 ..................................... GCCGAGCTGGCACCTTAAAGCCCTGAGCCTCTAGCCA 6805772 37 100.0 37 ..................................... CGGCGAAATGCTTGCCGCAGTCACTCAGGATTATATG 6805698 37 100.0 38 ..................................... CCGGCGACCGCAGGGGCGGGGAACGGGCAGGGGCGGAA 6805623 37 100.0 37 ..................................... AAGAAACAGGACATCTGCGCCGTCTGGCAGCGAGGGA 6805549 37 100.0 35 ..................................... AGTCTGGTGGCGGAGGAAAAGGATTTGAGGGAGCC 6805477 37 100.0 35 ..................................... TATCGCCTTGGGTCCGTGGGCTTTTGCTGTCAACC 6805405 37 100.0 38 ..................................... CCTAAAGGAGTTGGAATTCCCCACCAAGCCCACGGAGC 6805330 37 100.0 35 ..................................... CCGGCAGCAAGCCGGTGCATCCGGGAAAGCTTTCC 6805258 37 100.0 39 ..................................... ATCCAATCAAAAAAGCCGCGCAGTTCCTTGTGCGAGGGG 6805182 37 100.0 48 ..................................... AAGGGCTTTGTCGGAGAGCCTCCCGCTCCCGCTGTGCCGGTGCCGGTT 6805097 37 100.0 35 ..................................... CGCTGTTCAGCAGCCGGAACTGTGGCCGCAAGCTT 6805025 37 100.0 37 ..................................... CCTGCCGGTGCAGTGTCCATCAGTCGTGACGGACAGA 6804951 37 100.0 37 ..................................... CAGGCTTCCATTTTCCCTGTCGCTGCTGATTTTGGCT 6804877 37 100.0 36 ..................................... GAAGAGTTGCAGAAGTCCGTAGGTTGGATTTCTGCG 6804804 37 100.0 35 ..................................... TGGCAGTGGCTTGGTGCAACGGATAACGTTAACCG 6804732 37 100.0 36 ..................................... ACGCCAGCTACTGGCACGCGCCAGGTAAGCTGCCGG 6804659 37 100.0 37 ..................................... TGGCAAGCGGAAGAATGCGGACAAAGGTTCCCAGCGG 6804585 37 100.0 37 ..................................... AATCTTTCTTGCTCTAGTCTAATCAATTTGATTAGAG 6804511 37 100.0 36 ..................................... CTAAATTAGAAATAGTTGGGGGTTGGCGGTGCGAGA 6804438 37 100.0 37 ..................................... CCGGCATGCTAGCTGTTCAGCAGAACTGGCCGCCGGA 6804364 37 100.0 35 ..................................... CGGCATGATGAAGCTGAACCCAAGAGTTTTGCGGT 6804292 37 100.0 36 ..................................... CACCCAGCATGATTTGCGTTACTCGGTTACTTGTAC 6804219 37 100.0 33 ..................................... TTTCAGGACTGCCTTTTTGAGCTTTTCCTCAAT 6804149 37 100.0 38 ..................................... CCGGCACGACATCAACTTACTGCCGGCATTTCTTGACT 6804074 37 100.0 36 ..................................... AAGCAACCCTCGGAACCATGAAAACTAAATACCGGC 6804001 37 100.0 37 ..................................... GTTTCTGTCCAGACCTTCTTCTGGTTACGGAATCCTG 6803927 37 100.0 36 ..................................... CCCGCTCAGGCTTGTTCAAGCACGCCTGCCGGAAAT 6803854 37 100.0 36 ..................................... CTCATCGGGACGACGCGGCTTTATTTTTGACTGCGA 6803781 37 100.0 36 ..................................... CAGGCGAGAAATTGCTATCCGCAGGGAGCCCTTGTC 6803708 37 100.0 35 ..................................... GATCCAGCGCCCTGAGCCGGTTTGGGAGGATAGAG 6803636 37 100.0 38 ..................................... AGGCAAAACTACCGAGAGCAGAGAGCAAAATCTGAAGT 6803561 37 100.0 35 ..................................... CGGGCATCAATGGCTAGGCAATAAAATCCTAGTCC 6803489 37 100.0 34 ..................................... ACAGTCTTGACGCCCAGTTCGGCGGTCAGGGCTG 6803418 37 100.0 35 ..................................... GGGCCATCAGGCGTTTTGTCCGTTTTTGACGAAGC 6803346 37 100.0 35 ..................................... ACTAAGGCAGCCCTAGCTCGCTGCCACTCCCAGGT 6803274 37 100.0 37 ..................................... CTTGTATAATTAATTCAGAACCAAGACAATCCAAGAG 6803200 37 100.0 38 ..................................... ACTGCCCCTGGGGACACCGGCGCGTCAACGCCATCCCG 6803125 37 100.0 35 ..................................... CCGCATCGCCTGCCTTGAGTCCGAAGCTCTTAAGG 6803053 37 100.0 36 ..................................... CGGACACTGGCGGCACTCCGCGAGTCACTGGGGCCA 6802980 37 100.0 38 ..................................... TGCTGGACTCTATTGCATAAAAACGCTCGCCCTCAGCA 6802905 37 100.0 37 ..................................... TTTCAGCCTTGGCGCTAAACCGTTTAAACGTCCTGCC 6802831 37 100.0 36 ..................................... AACTCCAAAAAAGCCCAGCAGCTGGCCAAAGTCCTG 6802758 37 100.0 36 ..................................... GCTCAACTTTTGCTGCAGCTCGTAGTGGGAGGGGAC 6802685 37 100.0 36 ..................................... GCGGAACTCAGTTGCCGATTGTCTCCGAGCTGCTGG 6802612 37 100.0 36 ..................................... TGAGCCTTGCTGACCTCCCCCCACAGGAGCGCAAAA 6802539 37 100.0 37 ..................................... CCCCAGTGCATAGATATCTCTCTATGGCGAGATATTT 6802465 37 100.0 33 ..................................... CGGAACTCTTTACGAGGCATGGGCCCAACGGCG 6802395 37 100.0 34 ..................................... CTAAAAATCCTGCCGGAAGTGGCGGCCTTCGGGG 6802324 37 100.0 37 ..................................... CAGCGATTTGGCCGCTTTATCCCGTGCCTGTCACAGT 6802250 37 100.0 39 ..................................... ATCGCTCCTGACCCGGGAAGTGCCGGCAGGGGAAGTAAC 6802174 37 100.0 37 ..................................... AACTGTCGAGTTTGCGGAAGAATCAGGCTTCCGAGTC 6802100 37 100.0 38 ..................................... GGAGCAATTAGCCCACCACGTCGCGTGCGCCTTGGCGG 6802025 37 100.0 35 ..................................... CAGGATTGCGGGTGTCGATTCGCCCTTACCACTTT 6801953 37 100.0 38 ..................................... CGTACTTTTCTTCCCCAGCGCCCCTTTGTGATCCCGGG 6801878 37 100.0 37 ..................................... AAGCAGAGCGGCAGCAGAGAGAGAAGCCGCCCTAAAA 6801804 37 100.0 34 ..................................... CAACCTTAGAGCGCCCAACGATTTGGAGATAGTG 6801733 37 100.0 35 ..................................... CTGCCTCGTGCGGCAGTAGGGGCGATTCCTCTGGT 6801661 37 100.0 37 ..................................... AGTTTGGAGCTCCCCATCTCCGGGAGCGCCTCTTCAT 6801587 37 100.0 36 ..................................... ATTGTGACTGTGCCATCGTTGGCAACAGTAGCTTGC 6801514 37 100.0 40 ..................................... ACTTTCCCGCTGTATTTTGGATCGTTGATTTGGACTAAGG 6801437 37 100.0 35 ..................................... TCAAGGAGAACGCAACAATCTGGTTGGAGACCTGC 6801365 37 100.0 35 ..................................... CAGGCTTCTTCCCCTGGGAGCGTGCGGGCTGGGAT 6801293 37 100.0 38 ..................................... AAAACATGGAGGACAGGGGGAAGAAAACCCGACTCCGG 6801218 37 100.0 37 ..................................... CAACGACTTACTGGGCTATCCGGCGGTTCTGATTTGG 6801144 37 100.0 37 ..................................... CCCAATTGCTAGGAATTACCCCCGACGGCGTTCGGAA 6801070 37 100.0 34 ..................................... ATCTGTGCTGTTGCCAGGTCGGCGTTGACTTGCT 6800999 37 100.0 41 ..................................... GGCTAACTTGCCGGTGTTTGGCTCAGGCATGGACTATGAGG 6800921 37 100.0 39 ..................................... CAGGCCACATGATGAGTCAACCGGTCCCATCCTTCCGGT 6800845 37 100.0 36 ..................................... AGCCCCAAACGGCCCCCAGTGAGCTTTGGCGTAGCC 6800772 37 100.0 35 ..................................... AAGGAATCGACACGCAGCCCCGCGAGTTCTGGGTA 6800700 37 100.0 35 ..................................... CTCGCCCGGTTTTGGTTTTTGAGGAAGCAGCCAAG 6800628 37 100.0 37 ..................................... CAGTAGGGGTGGTAGTTTCTCAGGACATTTTTTAATA 6800554 37 100.0 33 ..................................... AAATATGTGGATTATCGCCCGTCTGAGCCAGGA 6800484 37 100.0 36 ..................................... CGCTGCCATGTCATTTTTGTCAGCCACGCCCGAACC 6800411 37 100.0 38 ..................................... CTGTAGTAGGTTACGTCCCACCGGCTCTCTTCCCCAGG 6800336 37 100.0 37 ..................................... TTGAAAACCACTGTAGTCAAAGACCTTACCTCTCTAG 6800262 37 100.0 33 ..................................... GTGGCAGGATGGCAGGCCGCCTTCTGAAAGGGG 6800192 37 100.0 38 ..................................... AGGCAAAAGTTGACACTCCCCAGATATGCCTCCTGCAG 6800117 37 100.0 33 ..................................... CGGCCATGCAGACGCAAGCGAAGCGTTCAGGAA 6800047 37 100.0 36 ..................................... TTGCTCGTTCCTTTCCTGTTCAGGGGTGCAGGTAAG 6799974 37 100.0 36 ..................................... ACAATGGCCTGCCCTCGTTGTGGGCAGCAGACCGAG 6799901 37 100.0 33 ..................................... CGGTAGGTATTGGGGTTTGATAGCCCTTCCGCG 6799831 37 100.0 39 ..................................... CCGGCTTTCCCCGCAAGGGGGCACGCACACCTACCCGAA 6799755 37 100.0 33 ..................................... ACACCTCTTTTGGCGTGGCAGCCGCCTCAAGCG 6799685 37 100.0 35 ..................................... AAGTCAGGGCGTGTGACACAGCGGGCGAATTTCCG 6799613 37 100.0 36 ..................................... TCGCGTCGATTTTCCCCCCTGCGGTCAGCAATGGAA 6799540 37 100.0 36 ..................................... CTGGCTTTTAAGACCGTATCTTTTAAGACTCTTAAA 6799467 37 100.0 35 ..................................... CGTCGCGAACGAGCAGTAATCGGGGGATGGTAGGA 6799395 37 100.0 37 ..................................... CGCACACGCATTTAAGGAGACGAAAACAGATGGCACG 6799321 37 100.0 38 ..................................... CCCGTTTCGCTCCGGGGGCCTTAAGTCGTGCGAGCGGA 6799246 37 100.0 36 ..................................... ATTCATCGGGAGCCCTAACTTACGTGCTAGATGCAA 6799173 37 100.0 36 ..................................... TGGGCTGTATGCGACTCAAACAAAAATACGATAATT 6799100 37 100.0 36 ..................................... TATTCATGCTGTTTGGGTGTGAGTGAGGACTCCCGA 6799027 37 100.0 38 ..................................... GCTCAAACCTTGAACCTCTGAAGCGAGAATTGTTGTAT 6798952 37 100.0 36 ..................................... GGGAAAAATTCCAGCTAACGACCAAACTGCCCCCGA 6798879 37 100.0 36 ..................................... TTCAATCAATTGGCAACTCAATCGTCAGCATTCTGG 6798806 37 100.0 35 ..................................... AATGAATCGATAGCGACCGCAGGCCCCCGAAAGGG 6798734 37 100.0 35 ..................................... GAGCCCCCTCCCGAACCGCCGCTGGATTACTCTGG 6798662 37 100.0 35 ..................................... CAGGAACAGATCAGGAACGAACCCCCCGCACTCGA 6798590 37 100.0 37 ..................................... AGCAAAAATCTACTAAAACTAACAAAGACAGATTTTT 6798516 37 100.0 37 ..................................... CTGGATTTAAGACTTCGACTGGCTTGATCCGGTGGGG 6798442 37 97.3 38 A.................................... ATTTCGCTCCCGGTGCTGCACCGGCAGAGGAAGATCCG 6798367 37 100.0 35 ..................................... GCTGGCGTGCCGCCCGGGAAAGAGGTAGGGGTTCT 6798295 37 100.0 38 ..................................... CACTCCACCGGTCGCTTTTTCTCGGGCGCTCCTGGTAA 6798220 37 100.0 35 ..................................... GAAAATATGCGCAGTTAGCGAACCATCATTGAATC 6798148 37 100.0 36 ..................................... TAGCTAGTCTGTATCTGAACGCCGGCATCACGCAGA 6798075 37 100.0 36 ..................................... TATTATTGAAAATGTTGAGATGGCCCTGACCAAAGG 6798002 37 100.0 34 ..................................... CTTTGAGAGCCACCTCCCACGGGCTTCTGTAGGT 6797931 37 100.0 39 ..................................... CTCTAGCCAGCCCACAAAATTCTGGAAACAATAACTTCT 6797855 37 100.0 37 ..................................... CAGCCCTTCCTGAGGTTCTAGCTCCCCGGGGAACAGG 6797781 37 100.0 34 ..................................... ATGAACATGCCCTGGGGAGACAAAAAAGCTGTGG 6797710 37 100.0 37 ..................................... TTGCAAATGTTGCGTCGGATGGAGTCGGCGAGTCCAG 6797636 37 100.0 34 ..................................... CCGTAACAGTTTAGGCATGTTTACCCGACTAGCA 6797565 37 100.0 37 ..................................... CCGCAAAGTTCTGTTTATCCTTGCGCCCCTGTTACAA 6797491 37 100.0 36 ..................................... AGCTAAGAGATGTTAGGGCACTGGCTTTTTACTATC 6797418 37 100.0 35 ..................................... GGCAGCACTGTCAAGCAAAAACTGGCGCAAGGAGA 6797346 37 100.0 36 ..................................... AGCGAGCTCGCACGCCGCGTTGTAGACTGACTCGTG 6797273 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================ ================== 123 37 100.0 36 CTTTCCTATAGCTGAATCCCGGCAACGGGATTGAAAC # Left flank : GTAAGCTTTTTTACCTAGTGATTTACGACTTGCCGGACACCCAGGCGGGGAACAAGCGCCGCACCCGGCTCCACAAGCTGCTGTCTGGCTATGGGACGTGGAGGCAGTACAGTGTTTTCGAGCTATACCTCACGGCTGTGCAGTTTGTCAAGCTCCAGCAACAAATCGAAAAACTGATCGAGCCGGTGGAGGACAGCCTGCGGATTTACGTGCTGGATGCCGGTGCGGTCAGGAAAACTTTGACTTATGGGTCGGAAAAGCCTAGACAAGAGGAGACGATTATATTATGATGGAGGGGAAGCGATGAATTTGGCAGTCCGAAGCGGGGCCGAAAACCCTGGGGGGTTCGCCAAAACGCCCGGAACCTTGAAAATTGAATAGTTTTGGCCTATGGCCACGCCGGCAGCGGGGGGGATACAAGCCTGGCAACGGGGATACGAGATGGGGTTCGTCAAAACCTCGCCTCGAAGTCCCTTCTCGCTGCGGTTTCAATCGGCGGG # Right flank : AGTGTCTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTACAAATATAGGTGGCACATAGAGTTGCTATGGAAGTTTCTTAAAATGCACCTTAAGTTGGATAAGCTGATTACTAAAAATGTAAATAATATAGCTATACAAATTTATGTTTCGCTGATAGCTTACCTGATATTAAAGATAGTATATATTCCTAAAAAATGGGGGACTACGCTACTAGATAAACTCCGCTATCTTCAATGTTGTATGTGTCAAGAAATCAGCTATGTCCACTGGATAGAACGACTTCTCTCTGGCTAAGCATTTTTACTCAGGGCAGGATAAATGTAAGCTAAAATGTAAAGTTTTGTGACAGAATTCAACACTTGTGGATTGAAACAGGCACGCTCTTGACGGACGCAAAAAGATGCCTCATTCTTTCCTATAGCTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCTATAGCTGAATCCCGGCAACGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.80,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [8.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //