Array 1 123506-126465 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIJX010000009.1 Actinomyces respiraculi strain ZJ1629 Scaffold9_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 123506 29 100.0 32 ............................. TCGTCGTCGTCGTTCACCTGGTACCGGTAGCC 123567 29 96.6 32 ............................G GCCACCGGGTCACCGTCCTGCTCCCACGCCAC 123628 29 100.0 32 ............................. GGGTTCGGGTAGGTCATGGCTATGTGGGGGCC 123689 29 96.6 32 ............................T CGCCCCTTCGGTCCTGCCGCCCCCAGGCATTG 123750 29 100.0 32 ............................. CGGCCGTGGCGGATCTCGATCATCCCGTCCGC 123811 29 100.0 32 ............................. TCCGAGCGGCTCATCTCGATGTTGGGGCGGCG 123872 29 100.0 32 ............................. GGCATCCCGCTCACCGACGGCCCCGAGGTCGC 123933 29 96.6 32 ............................G GCGTTCCGTGGCCAGGCCGTTGTCACCCGGAT 123994 29 96.6 32 ............................G GCGTTTTTCGCCAGGGTGTTGGCGGTGTTTGC 124055 29 100.0 33 ............................. CCCAACGGCTATGACGCGGAATATGTGCGCCAG 124117 29 100.0 32 ............................. GCCGCCGCCCTGACCACCACCGACGAGCGCGG 124178 29 100.0 32 ............................. CCTGGACCCGGGTGAGCCAGCGACCGCCGTCG 124239 29 96.6 32 ............................G CCTCTAGCGCACCCACTCTGTTGGACAGGCTG 124300 29 100.0 32 ............................. GCCTGGCCGATCTGCTCGGCCAGGCGCTTGCC 124361 29 100.0 32 ............................. CGGAACGGGCTCATCCCGGGCGCCGTCGACGG 124422 29 96.6 32 ............................G CCCCTCAGGCGGGAGACGTTGTCGGCGGCGGT 124483 29 96.6 32 ............................G CGGGCGCGGGCCTCGTGGCGGCCGGACGGGGT 124544 29 100.0 32 ............................. TCACCTAGCGCCACCTCCCAGCGGCGCCCGTT 124605 29 100.0 32 ............................. GCCTTGACGGCGTCACGGCCCATCTGCTCCAC 124666 29 96.6 32 ............................G ACGAGGGCGATGCGGTCGTGGGCGGCGGCCGG 124727 29 96.6 32 ............................G CCCCTTCGCGGTCGCCACCAGCGCGTCCGTGG 124788 29 96.6 32 ............................G ACGAGGGCGATGCGGTCGTGGGCGGCGGCCGG 124849 29 100.0 32 ............................. CGGGCGCGGGCTTTCCGCGTCTCGGCGCCGAC 124910 29 100.0 32 ............................. CCGGCCGTGAGCCCAGGCAGCCGGGCGGCGAG 124971 29 96.6 32 ............................G ACTCGATCTCCCCCGTGACGCGCTGGAACGCC 125032 29 100.0 32 ............................. GCCTGGAGCCGGGTCACGAACTTCGTCAGCGG 125093 29 96.6 32 ............................G CGCACCACCGAGCGCCCCAGGCGCTGCCCGCC 125154 29 100.0 32 ............................. TAGGTCACTCAGGGTCGAGCGCCCCGGGAGTG 125215 29 96.6 33 ............................G GAGGAACCCCATGAGCGAGCTGATCAAGGTCGA 125277 29 100.0 32 ............................. AGGGGGCCAGTCCCCGCGCTCACGGGGACTGG 125338 29 96.6 32 ............................G GCCTCCCCGAAGGTGCGCGCACGGTGCTCGAC 125399 29 96.6 32 ............................G ATCACGAAGGCCTTCACTCCCACCACCGTCCC 125460 29 100.0 32 ............................. CATACGGCGATGATGTCCTACAACGGGTACCT 125521 29 96.6 32 ............................T GTCGTGATCAACAGGATTATGACGAACCCACA 125582 29 96.6 32 ............................G GTTCTCGAGGTGGCGCTTCCAGCGGATACGGT 125643 29 96.6 32 ............................A GTCTGACATCAGGTACAACTCGGAAGGTTTGA 125704 29 100.0 32 ............................. TGCACGGGCGCGACCGTCTGCGCCGTGTGAGA 125765 29 96.6 32 ............................G GTTCTCGAGGTGGCGCTTCCAGCGGATACGGT 125826 29 96.6 32 ............................A GTCTGACATCAGGTACAACTCGGAAGGTTTGA 125887 29 100.0 32 ............................. TGCACGGGCGCGACCGTCTGCGCCGTGTGAGA 125948 29 96.6 32 ............................G GCGCTGACCGAGGCGGCGAAGGCTGCCGCGCG 126009 29 96.6 32 ............................G GGGCCCGAGTCCTACGACAGGCGGCTCCTCGT 126070 29 100.0 32 ............................. GCTACGATCTTGCGCTCCGGCACGGGCGCACA 126131 29 100.0 32 ............................. GCTACGATCTTGCGCTCCGGCACGGGCGCACA 126192 29 100.0 32 ............................. GCTACGATCTTGCGCTCCGGCACGGGCGCACA 126253 29 100.0 32 ............................. GCTACGATCTTGCGCTCCGGCACGGGCGCACA 126314 29 96.6 33 ............................G AGTCGGTTCGCCCCGACGTCGATGCCGTTCTGG 126376 29 100.0 32 ............................. GACCCTGAGCGGGCCGACGAGATCGCCATGGT 126437 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 49 29 98.4 32 GTGCCCCCCGCGTGAGCGGGGATGATCCC # Left flank : CCAGAGGCGGGCCGTCGCCGGTGGAGCGAACTACGCCGAGGAGGCGGGCGCATGGTAGTGCTCGTCCTCTCGGCCGCTCCTGCATCATTGCGCGGTGCGCTCACACGGTGGCTCATGGAGGTGTCCCCAGGGGTGTTCGTCGGTCACCTGTCCGCCCGGGTACGCGAGCAGCTATGGGAGCTCGTACGCGCATACATCGGGGACGGGCGCGCCCTGCTCATCTGGTCCACCCGTTCAGAGCAGCACTTCTCGGTGGCTTCGCTCGGTCATGATCGCGAGCCCGTTGATGTCGAGGGATGCCTTGTCATGCGGACGCCTTACCGCCAGATCGAAGGATCCACGGCGGTGCCCGGAGCGGTCAAAGCGCCTCGGGAGTCCTGGTCAATCGCGGCGCGCCGACGGCGCTATCGCAATTCTGCGGAGCGTGCGCTAGGTTCGCAGTGAAGGTGGATGGCCTCCCGCAGGTCACACCATCATTGGGATCTCAACGCTCTCTAAGC # Right flank : CTCGCCAAGGTAGGTCTCGGGGTGGATCATGCCGTGCCCCCCCGCTCACGCGGGGGGCACTCGAGCGGGCCGTCGAGGTGGCCAGCGAGAGGGGGATCATCCCCGCTCACGCGGGGGGCACTGACCCACACCGGGGTGGAGACGCGCGCGGAGCGGATCATCCCCGCTCACGCGGGGGGCACGACGGTGAGATGACTGACAAGGTCCGAGAGGCCGGATCATCCCCGCTCACGCGGGGGGCACCGGTGTCCACCCGGCCTCGACGGTCGCGATCCAGGATCATCCCCGCTCACGCGGGGGGCACGTGGACATCATGATGAACAGTGAAGCCTGCGCGCGGATCATCCCCGCTCACGCGGGGGGGCACTGGAGCGTGTCACCGGACAGGCCGAGCCGGGTGGGATCATCCCCGCTCACGCGGGGGGCACGGAGCGCAGCCATCGTCGTGATGGTCAGCCCCAGGATCATCCCCGCTCACGCGGGGGGCACTCGGCGCACCC # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.80, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCCCCCCGCGTGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 128054-126496 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIJX010000009.1 Actinomyces respiraculi strain ZJ1629 Scaffold9_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 128053 28 79.3 32 A.CAT......-.C............... GAGCGGCGTTTGCTCGCCCCGGCTGAGGGGGT C [128039] 127992 29 100.0 32 ............................. ATCTCGCGCTGGAGCTCGCTCATCGCGGCGAT 127931 29 96.6 32 ............................C TCGTAGACGTCCAGGGCGCGCAGCTCGTTGGC 127870 29 100.0 33 ............................. CGCTCGACCTCGCGGTCGTTGGCTGCGGCTGGG 127808 29 96.6 32 ............................T GAGCGCCCGAACCAGCGGTAGTCGACGGGTAG 127747 29 96.6 32 ............................C TCGCCAAGGTAGGTCTCGGGGTGGATCATGCC 127686 29 100.0 32 ............................. GCCAGGCAGGCCGGCCTGTGGGGTAACCGTGG C [127677] 127624 29 100.0 32 ............................. CGATGAGCTCGTAGTACGCCGTCGCGAGCTTC 127563 29 100.0 32 ............................. GGCGACAAGCCCGTCTTCGACTCCGCCAAGGC 127502 29 96.6 32 ............................C CCCTTCCGGTAGATCCTCCAGCCGGCCTCGCG 127441 29 100.0 32 ............................. GTGGCCACGCGGGTGACGATGCCCTCGGTGGC 127380 29 100.0 32 ............................. GCGGCTGCGCTCGGTGTCGGTCAGGTACTCGT 127319 29 100.0 32 ............................. CACCCACCAGGGAGGACTGAGTGAAAGACGCC 127258 29 96.6 32 ............................C CAGCCCAGGCAGGGCACCTGGGCGGGCACGAG 127197 29 100.0 32 ............................. GCGTGAGTGATGAATCCGGTGCGCAGCCCGTA 127136 29 100.0 32 ............................. CCTCCGATGGCGTCGATCTCACCGGCCTCGTC 127075 29 96.6 32 ............................C AACTTCTGGGGCGGGGCGAGCGGCCACCGGTC 127014 29 100.0 32 ............................. AACGTCCAGGTCGACGCGCATGGGTGCGCCGA 126953 29 96.6 32 ............................T GGGGCTGACCATCACGACGATGGCTGCGCTCC 126892 29 96.6 32 ............................C ACCCGGCTCGGCCTGTCCGGTGACACGCTCCA 126831 29 100.0 33 ............................. CGCGCAGGCTTCACTGTTCATCATGATGTCCAC C [126822] 126768 29 96.6 32 ............................T GGATCGCGACCGTCGAGGCCGGGTGGACACCG 126707 29 100.0 32 ............................. GCCTCTCGGACCTTGTCAGTCATCTCACCGTC 126646 29 100.0 32 ............................. CTCCGCGCGCGTCTCCACCCCGGTGTGGGTCA 126585 29 96.6 32 ............................C CCTCTCGCTGGCCACCTCGACGGCCCGCTCGA 126524 29 82.8 0 .....................GG.CA.G. | ========== ====== ====== ====== ============================= ================================= ================== 26 29 97.2 32 GTGCCCCCCGCGTGAGCGGGGATGATCCG # Left flank : CGGCCCTGCGGATCATCCCCGCTCACGCGGGGGGCACTACGCCCGGGTGCTGGGGCCACTCATCACCCGGGGATCATCCCCGCTCACGCGGGGGGCACGGGACGGTGGTGGGGGTGAACGCTCCAGTGATCGGATCATCCCCGCTCACGCGGGGGGCACTGGAGGACGATGCCCGGACGCACGTCGAGCACCGGATCATCCCCGCTCACGCGGGGGGCACAGGCACGTGCTCGCGCATGACACCCTGGATCACGGATCATCCCCGCTCACGCGGGGGGCACCCCCTGGCTGCGTTGTTCTCGCGGATCCGGGCAGGATCATCCCCGCTCACGCGGGGGGCACGTGGACATCATGATGAACAGTGAAGCCTGCGCGCGGATCATCCCCGCTCACGCGGGGGGCACGAAGCTCGCGACGGCGTACTACGAGCTCATCGCGGATCATCCCCGCTCACGCGGGGGGCACCCACGGTTACCCCACAGGCCGGCCTGCCTGGCCGG # Right flank : CATGATCCACCCCGAGACCTACCTTGGCGAGGGATCATCCCCGCTCACGCGGGGGGCACACCATGGCGATCTCGTCGGCCCGCTCAGGGTCGGGATCATCCCCGCTCACGCGGGGGGCACCCAGAACGGCATCGACGTCGGGGCGAACCGACTCGGATCATCCCCGCTCACGCGGGGGGCACTGTGCGCCCGTGCCGGAGCGCAAGATCGTAGCGGGATCATCCCCGCTCACGCGGGGGGCACTGTGCGCCCGTGCCGGAGCGCAAGATCGTAGCGGGATCATCCCCGCTCACGCGGGGGGCACTGTGCGCCCGTGCCGGAGCGCAAGATCGTAGCGGGATCATCCCCGCTCACGCGGGGGGCACTGTGCGCCCGTGCCGGAGCGCAAGATCGTAGCGGGATCATCCCCGCTCACGCGGGGGGCACACGAGGAGCCGCCTGTCGTAGGACTCGGGCCCCGGATCATCCCCGCTCACGCGGGGGGCACCGCGCGGCAGCCT # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCCCCCCGCGTGAGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //