Array 1 16762-16489 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJFG010000097.1 Pseudoalteromonas sp. SG41-6 NODE_97_length_16801_cov_5.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 16761 29 100.0 32 ............................. TCAATACCGTCAGCATCATCAGGAAAATGTGT 16700 29 100.0 32 ............................. GTGGTGCTAACGTTGCTTATAGTGCATCAAAC 16639 29 100.0 32 ............................. ATGACAGAAACGAGCGTGTATTTGTATATAAC 16578 29 100.0 32 ............................. ATATTGCGGAAATTTAGCGAAAAAACGTTGCT 16517 29 86.2 0 .............T............TGC | ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.2 32 GTGTTCCCCGTATCCACGGGGCTGAACCG # Left flank : CTGAACCGATTATGAATATGGGGGTTATGAGCTTAAAAA # Right flank : AAAGGAAACGCACCGTAAATTAAAAACGTTTTCATTTAAATATTTGAGGTAAGTTGCTCTGTTTTATCTTTAAACTCACGCACGTTTTTAATGATATAGCTACCACACTTTGATTTACGTGCGTGGAGTGTGAACCAATGATGCGCATCAACTTTAAATTCAGCAGACACTACTTTTCAAGCTTTTACTTAACGGCTATAACACTCTTATCCATGAAATAAGGTTAGAAATACGAACAATATAGATGTTTGCAGCTAGCCCCTATTAAAAATAGGGGCTTACCGTACCAAATATTAAAGTAGAGTAACTTTTAATTACACGCCTGACTGAAATTACTGTAGTAATATCTTTACTTCTTAACCTTGCCTTTAAGAACATAAATTTCGCCATCGAAACTGCCTTGGATGGTGAGGCCTTGTCCCGCTAACTCTTTGAGGTATTCAATGTGATCCTCAGTGATATGCTGGCCTGGTACCAAAAGCGGAATGCCCGGTGGGTAA # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTATCCACGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTATGCACGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.01,4.91 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 1 14529-14923 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJFG010000109.1 Pseudoalteromonas sp. SG41-6 NODE_109_length_14958_cov_3.9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 14529 29 100.0 32 ............................. CTGACCCTGCTGTTACTGCTGCAACAACTAAA 14590 29 100.0 32 ............................. CTTGAGTGCAATAGAGCCTGTGGCCTGTATGA 14651 29 100.0 32 ............................. CCAAAGCCCAGGCGTTTAAATATTTGCTCCAT 14712 29 100.0 32 ............................. CGGGTAAACGCGTTATTGTGTACGACCCGCTA 14773 29 100.0 32 ............................. TACGAGACATTTTAGCTATCATGGATGAATCA 14834 29 100.0 32 ............................. CGTGTACTTGTGTTCTTCGGGCATAGTAGACA 14895 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 100.0 32 GTGTTCCCCGTATCCACGGGGCTGAACCG # Left flank : ACTAAATGCAGGTGAGATCACTCCGCCTAAGCCTTATGATGATGCACAGCCACCGGCATTACCCGAGCCCGAATCTATAGGCGATTCTGGCCATCGTTCAAGTTAGGAATAAATTATGAGCATGTGTGTTGTAGTCACCGAAGCAGTACCGCCAAGATTAAGAGGGCGGTTAGCTGTTTGGTTATTAGAAATTCGAGCAGGTGTTTATGTTGGGGATGTTGGCAGGCGAATAAGAGAAATGATATGGTTTCAAGTCACTGAGCTAGCAGAGCAAGGAAACGTCGTTATGGCTTGGGGTACAAATACTGAATCTGGTTTTGATTTCATTACCTATGGTAAAAATGCACGGATGCCGATTGATTTGGAAGGATTAAGATTGGTTAAATTCATTCCAATTACGCAAGAGATACCTCCTGAAAAATAATTGTTTTGCTCTTTAAAAACGTGGTAGATTTTACATAGCTATTTTTATTTAATAAAAACAAGCATATACTATTAGA # Right flank : ATTATGAATATGGGGGTTATGAGCTTAAAAAGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTATCCACGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTATGCACGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //