Array 1 2326865-2329211 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046737.1 Vibrio cholerae strain 2015V-1126 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2326865 28 100.0 33 ............................ CAGATAGCCAGCGCTTGACGCTTTTAGCTCAAT 2326926 28 100.0 33 ............................ TAACGCTGATTTAGTTGAAATCATGGAGATTTT 2326987 28 100.0 33 ............................ CTCAAACGTACAGATGATCTCATTAACTATTGC 2327048 28 100.0 33 ............................ TAAAAGGAATCTCATTTTCCACTGACACCCCAG 2327109 28 100.0 33 ............................ TCAATCAATCAGCTACAGAACAGCACAACCCAA 2327170 28 100.0 33 ............................ TGCGTTTATCAAAGGCTACTCGCCCCGGTCTGA 2327231 28 100.0 33 ............................ TATGCACGTAGCCACAGCCGGAGAACTGATTGA 2327292 28 100.0 33 ............................ TCAAAGCCGCTGAGATGCTGAAGAACGAGCTGT 2327353 28 100.0 33 ............................ TCAAGTATGCAGAAGCGAATCTCATTAAGGATG 2327414 28 100.0 33 ............................ TATGTTTGGCAATGGTCCTGAGTTTGACAACGT 2327475 28 100.0 33 ............................ CCACTCCCACCCCAGAAAATCATCTGGCAGGGA 2327536 28 100.0 33 ............................ TGGCTGATTAATGGAAACTCCGTAATCAACATT 2327597 28 100.0 33 ............................ CTCGATGCGACCACTTGCCCACTTGGTGACGCT 2327658 28 100.0 33 ............................ TCGATATATCCGCAGACAACGCCAATGTCTTTC 2327719 28 100.0 33 ............................ CGGGGTGGATAAGTAAAGGCAGCGTTAAAATAA 2327780 28 100.0 33 ............................ TAAGCTGCTTGATCGCCGGACATTCATCAATAA 2327841 28 100.0 33 ............................ TCACAAGCGATTGAAGCAGGAAGAAAGGCGGGA 2327902 28 100.0 33 ............................ TGATACCCGCAGGCTGGTGCAGCTTTTCAGCTT 2327963 28 100.0 33 ............................ TCATAGAGATGGCTCTGGCCGATTTCAGCCGTT 2328024 28 100.0 33 ............................ TAAAAATGAAGGGCTTGCCGAAGGATGCAGAAG 2328085 28 100.0 33 ............................ TACAAAGTAGCACCGGGTGTGGTGTACGTGGGC 2328146 28 100.0 33 ............................ CGCAGCCTAACCGCTGCGTTTCTTTTTGCCTGC 2328207 28 100.0 33 ............................ TATATTCCGCGCCAAGCTGTCGAGCGATTCAAA 2328268 28 100.0 33 ............................ TCCCCCATCACAATCAATTGATTTAGCTTTGCT 2328329 28 100.0 33 ............................ CAACCGATTTGACGACATGCCGCACGCCAGTGA 2328390 28 100.0 33 ............................ CAAACGCACCGGAGAGGTGGAAGTGTTGCCCGA 2328451 28 100.0 33 ............................ TAAGCATATTCAGCCTTTAGCTATCCATAATTC 2328512 28 100.0 33 ............................ TGACGGGACCGACCCCTTGCCCTTTGATGAGCA 2328573 28 100.0 33 ............................ TTGTTATCAACTTGCCGGATAAAACGGACAATA 2328634 28 100.0 33 ............................ TCGCCAGAGAGTAAGACGCTTGGCCGCAGTAAG 2328695 28 100.0 33 ............................ CTGTTTACCGCGTGTTACGATATCCCCTGTCAC 2328756 28 100.0 33 ............................ CCTTCAAACCTCAGCTGCCGCCATATTGCGCTG 2328817 28 100.0 33 ............................ CTCATTCGAGAGTGGGACGCTTCACAGCCAACA 2328878 28 100.0 33 ............................ TACAGTAATCATCGGCAAGGTAAACCAACCTTA 2328939 28 100.0 33 ............................ CGTTTAAACAGCTTTGATATTGCGGACATCACC 2329000 28 100.0 33 ............................ TATGGCCGCAGCCTTGAATAAATCGTCCTTGTT 2329061 28 100.0 33 ............................ TGATAACTCAGCTTTTGGAGCTGTCTTTCCCGA 2329122 28 100.0 33 ............................ CTCTTTAATCGAATTCCATAACGGTGACGTTAA G [2329139] 2329184 28 71.4 0 .................T..AT.ACAGA | ========== ====== ====== ====== ============================ ================================= ================== 39 28 99.3 33 GTCTTCCCCACGCAGGTGGGGGTGTTTC # Left flank : CTTTACAAAGAACACCTTTGTATTGATTTAGCTTTCTCACTTACACGAGATATGGCAGGTCACTATGACAAACACAAGGTCTCTGATGCGTTTCGAAAACGGGTTATCAGCATGGATCTGTTACAACAAGTCTCCTCGGATATCAATGAGTTGATGGGAGGGGGAAATGCTCGTCGTACTAGCAAATGATTTACCCCCGGCAGTCAGAGGGCGTATGAAGCTATGGTTTGTTGAACCCAGAGCCAATGTGTTTGTTTCTGGCGTAAAAGATTCCGTTGCAGTGACGGTTGTCGACTACTTAATGCAGCATTGCCCAGCAGAATCGGGCTTGATGTTATTTCGCAGTATTCCAGATCCCCCTGGTTATGAGATTCGTTACAAAGGTGAAGTGCGCAAACCCGTGATTCAGCTCTCTGGATTACAGTTGATTGTCGAAACCCTTATTTTGTCAAAATAGCAATATATGGGTTTATTACTGTGCTCTTTAACAATATATTGGT # Right flank : AGTTTTATATAGGCTTAATCTTTGAGTTATCAGTGAGCCGGATATGGAAATGACGGATAAGTTAGGAAAGTTATTGCGAATTAAATGTTGAATTTACTGAATAGAGGGGCGATATGATGATTCTACTACAGGGTTATTTGCTTGGGGCTGCGCTGGTGGCGTGCGGCTTGCTGTGGGTGATGGTCAGGCACTTGGATAAGCATGATTGGCAGTGGGACAAAGGCGACATCTGGTTTCATTTTGTGTTTATGGTGTTGTTCTGGCCTTTAATGCTGTTTGGTTGGGTAAAACAGGGCAGGCCTAATTGGGCTGATTGGCTGAAACCTACGGCTAATCGTGCCGATTATTACCGAGAAATGGAACGTGCCTATCGAGAACTGAAAACCTGTGGCGCTTATGTTAGCTATAAACCTAAACCAGAGGGGATTTGTGACAACAGCTACGGTGAGTTTATTTTTCCTAGCGCTTTGCTTGAGAAGCAGTTAATTGAGCGACTGCGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCAGGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.40,-10.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //