Array 1 28615-25686 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZCY01000091.1 Prevotella copri strain iK21513 NODE_13_length_74569_cov_38.7382_ID_25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 28614 33 97.0 33 ................................C TTGTATTTTTGCAAAGCAGTAGCAGAGCGCAAA 28548 33 97.0 34 ................................G CTGGATCTCTCTAATGACTTTGAGAGCAATCAAA 28481 33 97.0 33 ................................G CGATAAGCATCAATCCATGATTTGCCACTCGGT 28415 33 97.0 33 ................................C AGTAGCCTCCTCAGCCTCTTTCAGCTCCTCTAT 28349 33 97.0 32 ................................C AATGGTTCGAACTGGTGCGACTGGTTGATGGC 28284 33 100.0 33 ................................. GACTTATACATACCACTCAAAGAACGTATCAAA 28218 33 97.0 33 ................................C CGCTTTTGCCTACCCCAAACAAGAGAGTAGGAA 28152 33 100.0 32 ................................. TGCCAATCTCTAAGTTTTTTCGCTTCTGCAGC 28087 33 100.0 32 ................................. CAGTCTGTTTAAGCGTATATTTACCGTCAGCA 28022 33 97.0 33 ................................G TCTCATTAGTTTTGTCAGTATTATGTTTACCGA 27956 33 100.0 33 ................................. GCATACCTAGGAGAATATCCATAAGTAAGAGAC 27890 33 100.0 34 ................................. ATCAATACCAACACGAGAATAATCAAGCTGAGGG 27823 33 100.0 33 ................................. GCTCTTGCATAATCTTATAGTTCGTCTCATTAG 27757 33 100.0 32 ................................. TGTGGCATGATATTGTAAAGACTAAAAGCCTT 27692 33 97.0 33 ................................A TCATACGAAAAGGAGCACCGCCAATAGCGGCAG 27626 33 97.0 33 ................................A TATCCATATTTGAATTTGGCTGCAAATAATCAA 27560 33 97.0 33 ................................C TGAGCATAATTAAGAGCAGCCATAGCATAAGCA 27494 33 97.0 32 ................................C CAGATGCATTTGAATTATGCTCAAGCCAAAAA 27429 33 100.0 33 ................................. CAATCTGACGTTGAACATCAACGAGACCAGCCA 27363 33 97.0 33 ................................G ATTCCGATGAGTTGGCACAAGATTTGGAACGCT 27297 33 97.0 34 ................................A TAAAAAATCTTATCAGCAACAGCATCAACAGTCT 27230 33 100.0 32 ................................. TATTCCGCTTTGCATTTTTACGTTAATACTCT 27165 33 97.0 33 ................................A GCCTTAAATTGCTCTTGTAACAGTCTATTCTGA 27099 33 97.0 33 ................................A TCGCATTAGTTTTATCAGTATTATGTTTACCGA 27033 33 100.0 32 ................................. CCTAGATATGCGGAATTGAAAAGTGCTCGTGA 26968 33 100.0 32 ................................. TTAATCTCTCGCAAAGTTTGTGCATCAACACG 26903 33 100.0 33 ................................. CTTGAGACTTTTGAAGAGAAACAGAAGCATCAA 26837 33 100.0 32 ................................. GAAAGTTAGTGTTAACCTGTGGATTTATGCTA 26772 33 97.0 32 ................................A CAGAAGCATCAGTAGTAAGATTACCACTAAAA 26707 33 97.0 33 ................................A TATTATCACTAGGACCCAAATAATCAATGTTAC 26641 33 97.0 34 ................................A ACCAAGAAGCCAAATCAATGTATGAAATATAAGG 26574 33 100.0 33 ................................. TTGCGTTGATTACGAATCCTTGCGGCATACCTA 26508 33 100.0 32 ................................. TCTTGCTAGTCATAATTCTTAACAATTAAAAA 26443 33 100.0 33 ................................. TTGAACTTCTTTATCCATTCCTTTTGACTTCTA 26377 33 97.0 33 ................................C TTTCTACTTTCAGACCTTATACAACGTACAGCA 26311 33 100.0 33 ................................. CTAGCGTATCACGAACAAAAAGATGAAATGGAT 26245 33 97.0 34 ................................A GATAAGTATTGGTTTGATGTACGTTATCCTGGAA 26178 33 97.0 33 ................................A GTCTTTGAAAAGCTAGCGAGTGTTGGCAGAAAT 26112 33 97.0 33 ................................A GCCATTAACGGAAGAGAAGTAGACAATAATGAT 26046 33 100.0 33 ................................. TCCTCGCAAGCGATATAGATAATCTGCTTGAAA 25980 33 100.0 33 ................................. GAAATCGTTTGTTGAGACTAGAAAACAAAGAGG 25914 33 97.0 32 ................................C AGACATAATAGTCATTGTGTACATCTTATGCC 25849 33 97.0 33 ................................C ACTGTGCCACACCCTTCCGCATATTGGCGTGTA 25783 33 97.0 32 ................................A AGTTGCTCAACACCGATTTTAATTGAACGCTC 25718 33 93.9 0 .........................A......A | ========== ====== ====== ====== ================================= ================================== ================== 45 33 98.2 33 GTCACACCCTTCGTGGGTGTGTGGATTGAAACT # Left flank : TGATGATTATCCAGTATTTTTAATCAAGTAGTGTATGTTTGTATTGATTACTTATGATGTAAACATTACCTCGGCTCATGGTGCGAAACGTTTACGCAATGTAGCAAGGGCGTGTTTGAATTACGGAAAGAGAGTTCAAAACTCTGTTTTTGAGTGTATTTTGACGGAATCTCAGTTTTTCGTATTGAGGGACCAGTTAAAAGGGATTATTGATACTGAACAAGATAGTATTAGGTTCTATATTCTTGGGAAAAATTGGAAACGTAAAGTTGAGACTTTGGGTAAGGATATGGGGCTTGACTTTACTGGTGAGCTTATCATTTAATGTATGAGGGTGCGAACCTATAGTATTGCAAAATAACCTATAGTTTCGCACCTTCTTAAAATCAGTGACTTACAAATATTATGCCTTTTATAATATTTTACGTGTAATTATTTTGCCATCTTTCGCAAAATAATTATCTTTGCATCATGATATTCAGCTATTTGCTGAATATGCA # Right flank : GAAAACAGATTTTATTTTCTGAGCCCACTTGAAAAAGTCATTTTTACGAAAACGTGCCATTGATTGTCAATAAGTTACAATGACAAAAAATATGATTCGGGACTTCTTTAAGTGGACTCAGTTTAGTATTATACAGCAATCTCTAGTTATAAGTGTTCAGAATGTGTCTCCTCCAGCCACAGCATTTGACTCCTTCGGTCACCGCATTCGACTCCTCCAGCCACCGCATTCGACTCCTTCAGCAATCGCATTCGTCTCCTTCGGTCACTGCATTCGACTCCTTCAGCCATCGCATTCGTCTCCTTCAGCCACAGCATTCGACTCCTTCAGCCACCGCAGCCGTATGTGTCAACTCAATGAAGTAGATGAAGTCGTGAAATGAAGTGGATGAGTTCGCATAATGAAGTTCATGATTTCGGCACAATTGTCAATACATGCAAATGGTAAAGCAAAAAGTGGTTTACTCCTACCTTTATGATTCTTATACGAAAATGTTTTTC # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTTCGTGGGTGTGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //