Array 1 227541-228033 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWKV01000001.1 Aquabacter cavernae strain Sn-9-2 NODE_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 227541 31 87.1 36 .A...A.G.G..................... TCCCCTCGTTTTACCAGGGCTCCCTTATTGCGACAT A,G [227543,227548] 227610 31 100.0 36 ............................... CGGTCCAGCTGATTCTGACTGCCAACCCTGGCGGCG 227677 31 100.0 33 ............................... GCGATCCCAAACCAGTCCTTAGCGGCGATATTG 227741 31 100.0 35 ............................... TGTTCGGCGATCAGGATGTCCCCGATGCAGCGGCG G [227759] 227808 31 100.0 33 ............................... AGCTCGATGCGCTCACGGTCCCACAGGACGTCG 227872 31 100.0 35 ............................... CACCAGACGGAGCGGTTCAATCTTGAGGTGACGTG 227938 31 83.9 35 ...A........G...A.T...A........ ATCTACAAGCTTCGTGAGATCATCGGCAAAAGCTG 228004 30 83.9 0 ................A......-G..GC.. | ========== ====== ====== ====== =============================== ==================================== ================== 8 31 94.4 35 GTCGCTCCCTCACGGGGGCGCGGATCGAAAC # Left flank : GCATGGCGGCGCTGGAGGAGCTGGCGCGGAACTATTCCACAAGCATCGTGCTGTGCACGGCAACCCAGCCCGCCCTGCGCAAGATGGACGATGCCATCCGCGACAAGCAGAAAACTCCCATCGGGTTCGACATCGATGACGCGCGCGAACTCGCGCCGGATCCGAAGGGGCTTTATGAGAAGCTGAAGCGCGTCCGGGTCGAGCGTTTGCCGGGCAAGGTGAGCGATGCGGAGGTGGCCGCGCGCTTCGCCGAGCAGCCGCAAATGCTGTGCATCGTGAACACGCGCGCCCATGCGCAGGCGCTGTTCGAGATGATCCGCGCCCTGCCGGGAGCGGCCCATCTGTCCACCCTCATGTGCCCCCGGCATCGGCGTATGGTGCTGGAGGATCTGCGCGTGAGGCTGCGCAATGGCGAACCCGTCCGCCTCGTCGCCACCTCGCTCATCGAAGCCGGCGTGGACATCGACTTTCCCGAAGTCTGGCGCGCGGCGACGGGCGCC # Right flank : CAGGTGGCTGCAACTCAGTCTTGAAGGCCTCTATCCAGCTTCTGGAAAGCGAGGAGAAGGGGGCGTCCGGTGCCGCCATCTGGCGGATTTCCGCCAGGGTGCGGCCCGCATGCGCCTCCAGTCGCTCGACCGCACGGTCGCGCAGGAGCGCTGCGTCGTCGTCCAGCTTGAGCGCGCCAAGCTCTTCGGCGGTGCGGGCGAGGGTGATGACGGTGTCGCCCAGGAATTCGAGGCGCCGCAGGATGCGCGTGCGCTCCTGGACCAAGGCGAGGCGGTTGAGGCCGTAGACCTGGATCGAGACCGCGCCGCGCACGCTGATGCCCGCGGCTCGTGCGTCATCTTCGATCTTGGAGACTTCGTGCGAATAAGACGGGAGCGCACCCGTCCCGATCGCACCGACGGGGGCGGCGAACACGACGCCGATGGGCTTCTCCGTTGCCCCTCCCGCCCCCCTGCGCGGGATATTGAAGCGCAGGTGCTGGCTGGGATCGTCCCGTTCC # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTCACGGGGGCGCGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGGGCGCGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.50,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [8-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 297079-297242 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWKV01000003.1 Aquabacter cavernae strain Sn-9-2 NODE_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 297079 32 100.0 34 ................................ GTATTTCCGCGCTTCGGACTGCACCGTCTCCCAC 297145 32 100.0 34 ................................ GGCGAATCCGGCGAAGTAGCGGACACCGCTGCGG 297211 32 93.8 0 .......C..A..................... | ========== ====== ====== ====== ================================ ================================== ================== 3 32 97.9 34 GTCGCTCTCCGTGCGGGAGCGCGGATCGAAAC # Left flank : AGCTGCACGGCGCCGCCCCGCGCGCCTTCATCGTGCTGCCTTTGGTGTCCGCCTTCTTCATCGACATCGCCAACGCCTTCGCCATCGGCTGGCTGGTGGGATAAAGGTCCCGCGCCCCTCTGCCTGCATCGCAAGCGGAGGGGGGCGGGGTTCTCTACCCATGATTCCGAGGGCGGTTCACCGAGCGGATTGAGTCCCTTCGCTCGGATCCCCCTCCGGCCGCCGCCTTTCCGGGACGTGCGGAGGAGCGGGGCCGCAGGCATCTCCCATCTCACGGTCCTGTATGTGCCGGAACGGGGATCTGCGGGGTCGGTGCACTCGCTGCGCGAACCTGAAGCACACATGCGCCCCCGCTCGGTTCGCGGACGGCGCAAAGGCTTCCCATTGCTGGATCCGGCGCCACAAGGGTTTCCGAACCGCCACCATTCCGCGCTCCCCCACGACAGGATCGCGCCACCGGGCCGATTCAGCCTTTTGGTGCCGTGTGTTAGAACCGGAAA # Right flank : CGCTGAATTCAACGCGGCGATCAATGCCGCCGCCGGTTGCTGGGGCCGCGATCACGCATTCTCAGGCCCATATCGCTCCCCGCCCATGGTTCCCGGCGGCTATCTCTTCATCCGGCCCCCGGATCCGGCTTCAGGCACGAACGGCAGGTGGCACAGGGTCGGGTCGAGCCAATGATGGGCGTCCATTTCCTCAAGCACCGCCCGTGCGGCGAGGAAGCTGCGGGCGCGTTCGGGGAAATCCGCATCCCGCCAGGAGGAAAGGGCGGTCTGTTCGTGGATCAGGCGGGCGAGCAGAAGGAGCGCGTTGGTGGCCGGCTCCGGGTCCAGCGGCTCCGCATCGGACAGGAAGGGTGCATCGCGGGGCGTCGGAGCATCCGTGCTTCCCTCCCGCCGGCCGAACAGGCCGACGGCGAGGGTGGCGTGCCAGCGGGCGAAGCGCGCCTTCACGGTCGCGCGCCCGGGCCGGGTTGCGGCCCCTGAGGTCCTTGCGGGCCGAGGGG # Questionable array : NO Score: 5.26 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCGTGCGGGAGCGCGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.40,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //