Array 1 1186775-1188823 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084347.1 Chryseobacterium rhizoplanae strain XL97 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1186775 47 78.7 30 T.ATAT..GAAG........A.......................... TTGAATTAACCATACTTGGAGCTTTGATAA 1186852 47 97.9 30 ........................C...................... AAAGCCTAAATAGTAGAAGGGTAACCCTGC 1186929 47 97.9 30 ........................C...................... TATTTTTTTTACTTCCTTCATGTCTGTTTC 1187006 47 100.0 30 ............................................... TCTACAGGAATAACGTTTATTAGACTATCG 1187083 47 100.0 30 ............................................... TCTGTTTCCGTGAATAATGAATAATCATTT 1187160 47 100.0 30 ............................................... GGAGCCTCAATGAAGGATTTGATTAATATT 1187237 47 100.0 30 ............................................... GAGGAAAAATGAAGGGGATTTTAGAGATTA 1187314 47 100.0 30 ............................................... TATTTCCCGAACCGGAAACGATCAACACAC 1187391 47 100.0 30 ............................................... ACGATTCGAATATAAGTTCGCACCGGAATA 1187468 47 100.0 30 ............................................... ACTGTCAGACACTAAACTCGAAAAGATATT 1187545 47 100.0 30 ............................................... TTTGCAAAGAATGTGAACACAACATCGAAG 1187622 47 100.0 30 ............................................... CAAATGGCTCAAGTGAAGAATATTGAGGCG 1187699 47 100.0 30 ............................................... TGAAAATCCTGACAGGTCAACTTTTGACCT 1187776 47 100.0 30 ............................................... TTTATTGAAAGTGAACGTCAGAGATTAGCA 1187853 47 100.0 30 ............................................... GTTTTGAAAAAACGGTTGAAAAGCCTATGA 1187930 47 100.0 30 ............................................... CACGATGAAATAGTAGCCGAAGAAGCGGAA 1188007 47 100.0 30 ............................................... CGGCAGTAGAAATAATTACGGCTTCGTCTT 1188084 47 100.0 30 ............................................... TTATTTGAATAATACTTACTTACACCTAGA 1188161 47 100.0 30 ............................................... TTATTTGAATAATACTTACTTACACCTAGA 1188238 47 100.0 30 ............................................... CTCTCATGAAATTGAACGTATATGGAGTCA 1188315 47 100.0 30 ............................................... CTTATCAAGGGAAGTTGTGCCCGTTTTTGA 1188392 47 100.0 30 ............................................... CAAGCTTTCTACTTACTTTAACATTTATAC 1188469 47 100.0 30 ............................................... GTTTTACTGTATTTAGTGCCGTCTTTTTTG 1188546 47 100.0 30 ............................................... CTTCTCTAGGATTACAATAGATAAAAGGAG 1188623 47 100.0 30 ............................................... ACGGTCATAGGAATGATATTCTTTGAACCT 1188700 47 100.0 30 ............................................... GTTTTACTGTATTTAGTGCCGTCTTTCTTA 1188777 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 27 47 99.1 30 GTTGTGAATTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC # Left flank : TTTTTTTCATATTATTGAACTGTTTAAAAAAGTTTGTTGTTTTCGGATACAAAAATAGAAAAACCATATGGGTCTTCTCTTATCATACATCAAGAAATGTAATTTTTTCTACCAACGTTAGGAATTATAACATGGTGTAAAATAAACGAGAACTGAAACGATTTATTTCATCATTATATATTATGTCTTTCCATATCATAAATTTTCATCAGCCTTTTACAATATTCAAGTAAAATATTTTATGTTAAATCCCAGAACCAAGAATAATTTATATATTTAGCCGTTACAAATTAAAACTATACTATGAAAAAATTCAAAAAAATCTCCAGAGATCAATTAAAAAAAGTAAATGGCGGAGGTAACAGAGATGGTATTTGCCAGCCACAATACATGCTGATTTGCGATGCCGTTGGAATTTGCGGACCAGAGCCAGACGCTGCTTGTAATTGTTATTGCGTTCCTATCTAATACAATGAGATCCCTCAAATTAGAGGGATTTT # Right flank : CCTCAAAATTTAATCCACTGAAAATCAGTGGATTTATTGTTTAATTAGGATTTAAAAATCAGAATAATTCCAGTTGCTGAAAGGTTGGAGGCGGCTCTTCCTTATTCCTGGCAAAGAAAATTTCAATATCTCCAAATTGTTTGTCAGTAATACACATAATGGCAACTTTTCCTGCTTTCGGAAGCATAAACTTAACTCTTTTAATATGAACCTCAGCATTTTCCCGACTCGGACAATGGCGTACATACATTGAGAACTGAAACAACGTAAAGCCATCATCAATAAGTGCCTTCCGAAAGCGGTTGGCATCTTTCATATTCGTTTTGGTCTCAGTCGGGAGATCATATAATACTAAAACCCACATAATCCGGTATGCATTAAACCTTTTGGCATTCATATCAGTTCAGGATAAGAAATCAATCTTTTTTCGCCAGTATAGCATTTGTAAAGCGACGAAGCTGTTGTTTTAACAGCAACCAGCAGTGGCCTCGTTTTATCGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //