Array 1 69790-68983 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPIX01000022.1 Serratia marcescens strain at10508 NODE_22_length_84373_cov_47.5769, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 69789 28 96.4 32 .............C.............. AGATGAAGGGCCACCGGCTTGATAACCCTCTT 69729 28 96.4 32 .............C.............. TTCATGGCCGGAACCTGTTATTTTAAGGAAGT 69669 28 100.0 32 ............................ GCTGGTGGCCGACATTTTGCCGATTGGCACCA 69609 28 100.0 32 ............................ AATGCCAGCGATCTGTCTACTGCGTCGGGTAA 69549 28 100.0 32 ............................ AGCAGGGCGAGAATGGTTTCCGGTGTTGCGTT 69489 28 100.0 32 ............................ GGCTGCGCCTCCCGGTTAGCCGCACGCACCAT 69429 28 100.0 32 ............................ CGGGGCTATTGCGCAGTCTACTCAAAATAACG 69369 28 96.4 32 A........................... GGTTACCCGGTACGTGCGGCACAGCAATAAAG 69309 28 100.0 33 ............................ AAAGCAGAAAAGAAATGGCTGGACGAACTGCAA 69248 28 100.0 31 ............................ TTGACCGCCAGGGACACGAGCGAATCGCGTA 69189 28 100.0 32 ............................ TTTGCATCGTCCGGCAGGGATTCACTGTCGAG 69129 28 100.0 32 ............................ ACTGACGCAGCACTTGCAGCTATCCAGGCGCA 69069 28 100.0 32 ............................ TTCGGCGGCCGGCCGCGAGCGTCTAGCCATCA 69009 27 82.1 0 .........T...C.A....T..-.... | ========== ====== ====== ====== ============================ ================================= ================== 14 28 97.9 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : AGCGCTGACGGCGCTGGGGGGATTCGACTGGATGAAAGGGTTACGGGACTATACCGACCTATCGCTCATCCAGGCTGTGCCTGCTGAGACGGCGTTTCGTACCGTCAGCAGAGTTCAGGTAAAGAGTAGCGTTGAGCGTATACGCCGCCGAGCCGTCAGTAAAGGTTGGCTGACTGAAGAACAGGCACGGGAAAGAATACCGATGGCGAACGAGCAGCGAACCTCATTGCCTTTTATTGCCTTGAAGAGTCTCTCCACCGGGCAACACTTCCGCTTGTTCCTGAAACAGGGTCAATTACAGGAAAGGCCAACGCCGGGCGTTTTTAGTTTTTATGGGTTGAGTGCCTCCGCTACGGTACCTTGGTTTTAACCCTCTTTTTTCGTTCAGAGGTAACACATTGATTTTGTTGCCTCTGAACGGTATCTGAAAAATTAGGGTTAAACCGAGGGATTTGACTGTTGTTCTTTAATAATCAGTTTGTTAGAGGCTATTTTGCTCA # Right flank : TAGAAGGGATAAAACTTTACCGACACCTGTTAACCAGGAAGCAAATACTCCAACGACAGCGGCGGGTGACTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGCTTGACGCGGTATTCCAGCTTCAGCGCCGTTGAGCGATCCCCCACCTGGCAGTGAAACGCCAACGTCAATTCCCCTTTGCCGCGCAGCGCCTTGGCGCCTTTGCCGGCCTGATGCTGCGCCAGGCGGCGCGCCACGTCGGTGGTGATGCCGGTATACAGCATGCCGCTCGGTAAACGCAGCATGTAGAGGTGCCAGAGAGTGGGGAAAGTGTCGGTCATCGTACGCCGTTTCGGTGGCCAGGGTCGGCGTATGATGGCATGTTCGCCATCACAATCCCATCCCCGGCCGCCGGTGCCCTACCGCTTTACCCCTTTTTACCCGCCAGCTCGAAGCGCGGCGAGACGATGCCGTACAGCGTCCAGCCGAGGAAGGTGGCGATGGCGCCCCACATCATC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 79562-78271 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPIX01000022.1 Serratia marcescens strain at10508 NODE_22_length_84373_cov_47.5769, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 79561 28 100.0 32 ............................ GCGACAATTACTCGTTCGAAGTGCATTTTCAT 79501 28 100.0 32 ............................ TGACGGAGACTATCTCACAGAGGAAATGAGCC 79441 28 100.0 32 ............................ GCGACGACATGGGGCCAGAAAAAACCACCATT 79381 28 100.0 32 ............................ ATGGGAAAAGCACCACGCCCTAATGCGCGTCT 79321 28 100.0 32 ............................ TTAACAGGGCGGAAAAACGCGGTCAAGCGTAA 79261 28 100.0 32 ............................ GCCCTGGGCGGAGGTAGCCACAAAGGCGCATA 79201 28 100.0 32 ............................ TGGGTGATGGCGTTGACATCTTGCAGCAGCAG 79141 28 100.0 32 ............................ GCAGGGTCATGCATCGCATTATTGCCGTTGAA 79081 28 100.0 32 ............................ GGCAGGCAGTAAGGCGGCGAAGAAAGAAAAGA 79021 28 100.0 32 ............................ ACGCGGGAACCGTTCACGGCTTCTTTTGCTTT 78961 28 100.0 32 ............................ AATATGTCGGAGCTTACAACACGCTCCACAAC 78901 28 100.0 32 ............................ CTTCACGTCCAGCGTAAGGCCGTCAGACCAGT 78841 28 100.0 32 ............................ CAGTGGACGTACTGTTACATCGACTCGAGAAA 78781 28 100.0 32 ............................ AGATGGCGAGCGAACTGATACATGATACCTGT 78721 28 100.0 32 ............................ GATATATTCAGAGGGACCCGTTCTATCACCCC 78661 28 100.0 32 ............................ TGCAGGCCCAGCAATTCCATAACGCTGCGCAC 78601 28 100.0 32 ............................ GTGAAGCGACATTCTCCGGCAACGTGGACGCC 78541 28 100.0 32 ............................ CTCAGCGCGCACGATGAAGTTAAACTCATCGC 78481 28 100.0 32 ............................ TTTGACTACAGCATAGCAATGTAAGGAACCCA 78421 28 100.0 32 ............................ AGAGAGAAGATCTCTAAGGGATCGAGTGTTTA 78361 28 100.0 32 ............................ ATGGGAATGATGCCAAAATTTGCCAGTCCGGC 78301 28 96.4 0 ....................A....... | G,A,A [78274,78278,78280] ========== ====== ====== ====== ============================ ================================ ================== 22 28 99.8 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GATCCTGTTTACTACGGCCGCTTCGGTTTTAAACCGGCCGCCGCCTATGGCCTGCATTGTCGCTGGCCGGACACGGAAAGCGCGTTCCAGGTCTACCCGCTGGCGGAAGACGCCCTGAATGGCGTCAGCGGCGAAGTGGCTTTTTCGGCGCCGTTTAATCGCTTTTAACGACCGGCAATAGATACTCCAACGACAGCGGCGGGTGACTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGAGCTGGCAATTCAGGTCACCTGTGGGGTCTATGCGTCTGAGTGGGACGGATGGTGATACCAAACAGGGAACCTATAATTCCCCCTAAAATGCAAAGATGTCACCTTACCCCGTTCTTGTTTGCCGAACCCTTTTTTGAGTGCCACTTTTAATTGATTGATTTAAAGTCATATTTTTAAACTCTTTAAAAAAGGCTTTTTGAACGGAGATTTCGATTTTCCTCCATCAATCAGCTGATTAGCGCTAATATGCAACG # Right flank : AAGTAATATGTATTTGATACATTCCGGCAGTGATCAATAAGTGGATGATTTTATTTTTCTGATTGATGAATATTGACTCGGTTGCAACGGATTTCCCTGGAAAAACGTGGTAGAACGGTGGTGTCGCCTGCATTGACATTCATCGCTTGTTATTTATTTTAATTGTAATTATTTCATTATGGATAAGAAATATAACAATGAAAAATACCCTTTCCCCCTCTGAATTAAAAACAATACTGCACTCGAAACGAGCAAACTTGTATTACCTGCAATATTGCCGAGTTTTAGTGAATGGCGGCCGCGTCGAATATGTCACGGACGAAGGAAAGCAGTCTCTTTACTGGAACATCCCTATTGCCAACACTACCGCCATCATGTTGGGAACCGGAACCTCGGTCACGCAGGCTGCAATGCGTGAGTTTGCTCGCGCCGGCGTTTTAGTCGGATTCTGTGGTGGCGGTGGGACACCCCTATTTGCTGCTAACGAAGTGGAAGTCGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //