Array 1 289116-294008 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSQX010000008.1 Xanthomonas sp. Sa3BUA13 NODE_8_length_306472_cov_27.152966, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 289116 28 100.0 32 ............................ ACCTGCATGCGCTGTGTGAGGGAACCACCGTT 289176 28 100.0 32 ............................ GGGTGACAACGACATGCGCGAATTGCTTTTGA 289236 28 100.0 32 ............................ GTTGGGCATAGAATTGTTATTAGACCCACCGG 289296 28 100.0 32 ............................ GAATCGGGATCTTGCAGCACTTCGTGCGGACC 289356 28 100.0 32 ............................ AACCTTGGCATGGATGAAGAGGCGTACTTGGC 289416 28 100.0 32 ............................ ACAGAGGAACCAGTTGCTGAAGCACTCGATGT 289476 28 100.0 32 ............................ TGGTGCCACGACCAGCAGTGCGATCGAGGCAC 289536 28 100.0 33 ............................ CTCCAGGCGGGCGCCCTTCGCGAACGCACCGCC 289597 28 100.0 32 ............................ TTCGGCTATGCGGGGGAGAAGTACGCCATTGC 289657 28 100.0 32 ............................ GCGGTGGGCATGCCGAACTTCTCCAAGAAAAT 289717 28 100.0 32 ............................ AGCCTGGAAGAGATCAACACGCTGGGGCAGCA 289777 28 100.0 32 ............................ ATCACATCGGCCTGGCGGTCCCGGTGCGCCGC 289837 28 100.0 32 ............................ GAGAACATCCACCGGCACAGCAGCAGGCGCGG 289897 28 100.0 32 ............................ GCAGAGGCGGCACGGGTACTCAGTTTCTGATC 289957 28 100.0 32 ............................ AGCCGGCAGCGCAGGGCGTGGACCTGGTGACG 290017 28 100.0 32 ............................ TTCCGGCGGTTACGCGCGACCGAACGTCGCTT 290077 28 100.0 32 ............................ TTTCGCAAGCGTTCGCACAGTGGCAGAAACTT 290137 28 100.0 32 ............................ ACCGACCAGTCGGCCAACGGGAGTGCCGAATT 290197 28 100.0 32 ............................ TACAGCGACGGCCGCGGCAATCGCAGCCGCGT 290257 28 100.0 32 ............................ ACGGCGGAGCACCCACACAACAAGCCGATCGC 290317 28 100.0 32 ............................ AGATCGGCAAGGCCCGCGGCTACAGCGTCGAT 290377 28 100.0 32 ............................ ATTGCCGCGATGCCGGGCAAGCTGCTGGGCGC 290437 28 100.0 32 ............................ AGGACCAGCCGGCCACCGAGCAGATCGCCAGC 290497 28 100.0 32 ............................ TGGCCGCAGTCGCCGCATGGTGCTTCGGGCGG 290557 28 100.0 32 ............................ GTAATACTTGGCCCAGCATAGCAAGTGCTCCC 290617 28 100.0 32 ............................ TACAAGTACCGCCCGGAGTTCGTGGAGAGCGA 290677 28 100.0 32 ............................ ATGACGCTAGCGACCGACATCGCCTTGACGCC 290737 28 100.0 32 ............................ ATGATGCGCACTCGCTTCAATTCCGATGTCTC 290797 28 100.0 32 ............................ GGACGACGAGGACATCGACGTGGAGGCGTTCA 290857 28 100.0 32 ............................ GACTACAAACCGTTCGCGCAGCGCCCCTACGG 290917 28 100.0 32 ............................ GATGGCAGCGGCGCCACGGCAAAGTTTACCTG 290977 28 100.0 32 ............................ AACGATGACCTTATCGTCAAGCACATGCCCAC 291037 28 100.0 32 ............................ AAGATGATTGCTTGTCGTCAGGCGATCAGTAG 291097 28 100.0 32 ............................ AGCCCAAGGTTGAGACTTCCGCAGCTATCCTT 291157 28 100.0 32 ............................ GTGTCGCGGATCGGGAATTGGTGGATGACGGC 291217 28 100.0 32 ............................ TACGAAAAGGCCAAGGCCGACTACGCATCTGA 291277 28 100.0 32 ............................ CAGCACGTCGCCCTGCGTCATCAGCTTTTGGA 291337 28 100.0 32 ............................ ATCCAGCTCCAGCGTCTCGCCAACTACGTACT 291397 28 100.0 32 ............................ GCCAACCGCCAGCGTGCCCGTGGCCGCCCCTG 291457 28 100.0 32 ............................ AGCACAGGGGCCTCGCCCCGCTCGACCGTGCC 291517 28 100.0 32 ............................ TCGAAGCTCACCGGACCCAGCAATGGCTCCAT 291577 28 100.0 32 ............................ ATCACGCACATAGTTCACCTGGCGAATTTGTA 291637 28 100.0 32 ............................ CTCATAAGTCGGAGCGACAGGCGGGACCGCAT 291697 28 100.0 32 ............................ GCCAACATCTGTTGAGCCACGAACACATCAGC 291757 28 100.0 32 ............................ AGCCGTGGGAGCGCGAAGAGGGGCACGGTCCG 291817 28 100.0 32 ............................ GCCCAGCCGTTCAGGGTCTTGTTCACCCTCGT 291877 28 100.0 32 ............................ CACTTGAAGGCGAACGCCTGCTTCCAGTTGTT 291937 28 100.0 32 ............................ ATGAAGGGTTTGATGGTCTGCCGCGCGGCCAT 291997 28 100.0 32 ............................ GGATGGCGCGAGCAGAACGTGCTGCGTCTGGA AGA [292012] 292060 28 100.0 32 ............................ AGGATCGCGCCGGCGCCTGCCTGGCGGTATCG 292120 28 100.0 32 ............................ TGGTGCCTACTTCGCGCTAGAACGCGGTAGAC 292180 28 100.0 31 ............................ TGGACGAAGTGGCGATCTACACCACGGCGTT 292240 28 100.0 32 ............................ ACTCGGCGACGAGTTCAGGGGCGCCGCTACTT 292300 28 100.0 31 ............................ AGTCGCCATGGTGGCGCGTCCAGAATGCCTT 292360 28 100.0 32 ............................ GTGTTGACGCTGACGTGCGAGCAGGTCTCCAC 292420 28 100.0 31 ............................ GGCTGCAGGTCGAACAGGCGATCGCGCAATT 292480 28 100.0 32 ............................ CTTTCGCCCCCCATCAGCGGGCAGTCTGAACT 292540 28 100.0 32 ............................ ACGCGCCACTTCGGGTCGTTGACGGTCCCGTG 292600 28 100.0 32 ............................ GGCGCGCGCGGCCGCGAGCCGGAGTTGGTCAA 292660 28 100.0 32 ............................ ACCGAGCCGTGCCCCAGCTGCTTCTGCGCCTC 292720 28 100.0 32 ............................ GTAGCCGCGGTCGCGCGCGAAGTTCCAGATGT 292780 28 100.0 31 ............................ CACTCGGTATGCCCGGCGTGGCGCGCGTCTT 292840 28 100.0 32 ............................ AAGACGACATTGTGGGTGACCTGCATGTCAGA 292900 28 100.0 32 ............................ TTGGCGCCGCGGCGATTGCGCACGTAGTGCTC 292960 28 100.0 32 ............................ ACGCGGAGGAGGTTCACGACGTCGCCGTCCAG 293020 28 100.0 32 ............................ CGTCCGTTGCGGTGCTAATGGACATATAGATA 293080 28 100.0 32 ............................ ATGATGCGTACTCGCTTCAATTCCGATGTCTC 293140 28 100.0 32 ............................ GCGAGAACTGGGCGAAGCTGCCGCCGGAGCAG 293200 28 96.4 32 ................C........... CGAGCGCGGCGCACCACATCGTGCAGGGTGAC 293260 28 96.4 32 .................T.......... ATCTGCAGGAATGCGTCGACCGGACCCTAGGT 293320 28 100.0 32 ............................ GCGGTGACCCGAACGCCCGGGGCGATGTCGAC 293380 28 100.0 32 ............................ GACCTGCAGTTCCCCCTGGTCAAGCTCGGCAC 293440 28 100.0 33 ............................ ACCGTGGTGGGCTTGGGCAGGGAGCATCGCCAG 293501 28 96.4 32 .......T.................... TGTTCCGGCGCGATCTGACCGGCGCACTGCAT 293561 28 100.0 32 ............................ TCAACAGGGAGCGACTTCCGGGCCGCGACCCA 293621 28 100.0 32 ............................ CTCGCATCGCAGCCCCTGAACGAACTATCCGG 293681 28 100.0 32 ............................ TGCTGCAGGCGCTGCGTGGCGTCGATGATGGA 293741 28 100.0 32 ............................ GTCAGCCCGACGCCTGGCGTCGTGGACGTGTA 293801 28 100.0 32 ............................ GAGGCCGATGCGCTGACCAGGGAACTCTTTGA 293861 28 100.0 32 ............................ AGTAGCGTGCGCTTGCGTGCCGATTGGATCGG 293921 28 96.4 32 ...........................G GCGACATCAACACCGAGTCGAAGGGCAGCTAC 293981 28 78.6 0 .C........AAG............C.T | ========== ====== ====== ====== ============================ ================================= ================== 82 28 99.6 32 GTTCACTGCCGCATAGGCAGCTCAGAAA # Left flank : ATTGCAGGGCCTGATGGCAACGTCCTGGCTCAAGGGCATGGGCGACCATCTGTCGATTCCCGGCATTGCCCTGGTGCCAGCCGAAACCTCGCACCGACAGGTGACGCGTGTCCAGGCCAAGAGCAGCCCTGCGCGCCTTCGACGCCGCGCCATGCGTCGGCATGGATGGGATGCCGACACCGCGACCGAGCGACTCCCCGATGCGGCGGCCGAGCGACTTCGGCTTCCCTTCATCACAATCGGTAGCCGAAGCACCGGCCAGGCGGCGTTTCCCTTGTTCATTCGGCATGGACCATTGCTGCAAGAAGCCAGGCAAGGCCCGTTCAACAGCTATGGCCTTAGCCATGAGGCAACGGTTCCCTGGTTCTGACCCTTTTTTTGCGCCCCAATAAAATATCAAAACAATCAAATACTTAGGCGCCATCTTCTCGGAAAGGGAGGATGGCTTTTTTGCGTTTGGTTTACTATAACTTTCAAACACTTGGATGAGATCTGGTCTT # Right flank : TCCACCTACGCTCAGCCGAGCGCGTAATGCCGCAAGAACATGTCCGCCGCCGACTCCGCCACCTGCGCCTGCTGCGCGGCGCTCAATGCCGGCTGGCCCATGGCGATCTGCGGCCAGAACGCGAAACCCTTGACCAGGCCTTGCAGCTGCTGCGAGGCGAATTCCGGATCCAGCGGCTGCAGGCGGCCGTCGGCCAGGGCCGCGCGGATCCACACCGTGGTGCCCTCTTCCTTGCTGCCCAGTTGCGCGATCAGTTCGCGGGCGCGCTCGGGCGAGTGGATGCCCTGGGCGATGGCCACGCGCGACAGGTCGACGAAGGCCGGATCGTCGAGCAGCCGCAGCTTCTGCTGCAGCAGTTGCAGCAGTTGCTCGCGCAACGGCCGGTCGGCGCGATACGGCACGTCGAGCGTGTCCGCGCTGCGCTGCCACAGCCCGCGCAGGATCTCGGCGAACAAGGCGTCCTTGCTCGGGAAGTGGTTGTAGACGGTGCGCTTGGACAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //