Array 1 11714-8006 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTEM01000015.1 Xanthomonas translucens pv. translucens strain UPB787 contig_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 11713 31 100.0 34 ............................... CCGCTGCGACTATTCACGTTGGCCTTTGCCTCAT 11648 31 100.0 34 ............................... GCGAGAGGGCGAACATCGAACGATGCTCGATGAA 11583 31 100.0 34 ............................... ATAAGCCCGTCGATCTGATCCAACCGCGACTTCG 11518 31 100.0 35 ............................... GTGAAGAACATGGTCACCATCCTGGGGGAAAAGCG 11452 31 100.0 34 ............................... CTGCGCAGTAATAGAGCGCAGCTTAGACTCCCCC 11387 31 100.0 35 ............................... AAGCAGGTGGTATTGGTCGATGGCGCCACCTTGCG 11321 31 100.0 37 ............................... TCCTGTAGGGCTAGACGCTCTTCGAGGCTCATTACGC 11253 31 100.0 35 ............................... GGATCATACGACGTGGAAACGGGCCGCCGGCTTAT 11187 31 100.0 35 ............................... CAAGAGGAGCAGGAGCGCAAGGCCAAGAAGGGTCC 11121 31 100.0 34 ............................... CTTTGCCTGGCTCTGGTCGATGCCCTTCTCGGCC 11056 31 100.0 35 ............................... TCGGATACCCTGAGCACACGCTCGGGTGAGATGGT 10990 31 100.0 33 ............................... TCGGGCGTGGTCCGCAATCAGGTAACCGTCCTG 10926 31 100.0 34 ............................... ATCTAAACAAAGAGGAATTCCGATGACGGACAGA 10861 31 100.0 34 ............................... GAGGTAACCGGCCCGTACGATAAGGCGCGGATTT 10796 31 100.0 34 ............................... CTCATTAGCTCTGTCATTGCCACCGATTCCAACA 10731 31 100.0 35 ............................... CCAGCGTGCCGCGGGAGGGCCTAGAGGAGACCACG 10665 31 100.0 34 ............................... CGCCGCAACAAGGCGCCCCCCTGCTTCTCTGTAC 10600 31 100.0 35 ............................... AATTAGACTTTCGAAATCCGCGATCTGCGAATCCA 10534 31 100.0 35 ............................... GCAGAACGGACGTAGCATGTGCGAAACAACCCACG 10468 31 100.0 35 ............................... GCGAAACATTGCGCTGGTGTTAGCACGCTTGCCGG 10402 31 100.0 34 ............................... CTCCAAGCGCTGGCGAGGCGTGCCGACATCCATA 10337 31 100.0 34 ............................... CCTACCACGCTGCCCAACGACAGCGCAGAGCGCA 10272 31 100.0 35 ............................... TGGTCCTTCATCCCGTCGATGACCTGGCCCAGGTT 10206 31 100.0 33 ............................... TGCCGCGAGCGAGCCGATCGACGCCCTTATAGC 10142 31 100.0 35 ............................... TGCCCGAAGGTGACGCGCGAATCGTATGCGCCGAT 10076 31 100.0 36 ............................... ACCGCAGCGCCGGCATTGGTGACCGGTGATGCGGCC 10009 31 100.0 36 ............................... GCGTAGTGGTCTCCGCCCGCAGGCGAAGGTCGCCGG 9942 31 100.0 35 ............................... CAGCGCGTCCCTGCCCAGCGCTGAGGACTTTACGG 9876 31 100.0 34 ............................... AGGGGTGCGAAGCTCCTGCACCTTGATCGGGGTG 9811 31 100.0 35 ............................... AGGTTAAAGCCAACCAGCACGCTAGTGCCCTCCAG 9745 31 100.0 34 ............................... TTCGCCTGGCTCTGGTCGATGCCCTTCTCGGCGA 9680 31 100.0 35 ............................... CGTGAAAAAGCTCTACATTGCGCACGGTGACAATA 9614 31 100.0 34 ............................... ACTAAGACGGTGAGCGTGATGGACCTGCGCACCA 9549 31 100.0 35 ............................... TCGGTGTTCAACGGCCGTCGCAACCTCGCTGAGGA 9483 31 100.0 35 ............................... ATCGCGTCCAACGGCACGCCGAACACTTCGACGCG 9417 31 100.0 35 ............................... TGGTCCTGCCTGTTGGCGATCGTCATCTGCTGGGC 9351 31 100.0 35 ............................... CATGAGGACCCGAGAAGTAGCGCCTACTGCCACCG 9285 31 100.0 33 ............................... TTCATGGGTTTCCCTCTGTGGGTTTCGTGGGCG 9221 31 100.0 34 ............................... CTGATTCGCCCGAAGCTTACCCTTACCACTCACG 9156 31 100.0 33 ............................... TCGCTCGGCTTGGGTCCGCTGGCACTGGCCGTC 9092 31 100.0 37 ............................... TTGAGCCCCACGATCGCCTCGGCGGTGCGTGTGAAAG 9024 31 100.0 35 ............................... TCCGGCGAGGACGCCGACGGCCTCGGCGACCGGGG 8958 31 100.0 35 ............................... TTGAGCCCGACCGCCTGCGCGGGGATTCTGCGCCG 8892 31 100.0 34 ............................... TCATCAAGCTGGCGGCAGAACTCGTTGTCGAAAT 8827 31 96.8 35 ..........T.................... CGCTGCCCGGTCGCCCTTAGCGCCGCCGTGTGGAG 8761 31 100.0 35 ............................... GTGGCCGCGCGGATGCCAGCCGCGAGCGGGTACAT 8695 31 100.0 35 ............................... AAATCTAGTTCACGCCGATGTGCCGGCGCTGCTGC 8629 31 100.0 34 ............................... AAAATCCCGCAGTTCGAACTGATTTACAGAAAGC 8564 31 100.0 35 ............................... CTGCTTGCTGAGCAGCTGCTCCCGGCCACGGTACC 8498 31 100.0 35 ............................... ATTGCTTTACGCTATCGGCGCGCACAGCACGCGAG 8432 31 100.0 35 ............................... CCACCGGCCAAGGCTGGAAGTCCGTATTTGGCACG 8366 31 100.0 34 ............................... CAGTTCTCGTGCCCGGCACCGCCAGGCTTCTTGC 8301 31 100.0 34 ............................... TGGAACAGCGAGAAGCACCACACTCGCATGAGGC 8236 31 96.8 34 ............G.................. AACCGTAGGTTGACTGGTTGGCCTGCCAAATAAA 8171 31 100.0 36 ............................... AGGAGGCGCTGTCGTCCACGATCCGCACCGCCAAGA 8104 31 87.1 33 ..............AT....C..G....... ATGTATTTGTTCGAAGAACATGTTCTTGCCGGT 8040 31 93.5 0 ...............C.........C..... | G,G,G,T [8010,8030,8032,8036] ========== ====== ====== ====== =============================== ===================================== ================== 57 31 99.5 35 GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Left flank : ATGAAAAGGCCGCCGCGCCATGATGGTTCTGGTCAGCTACGATGTCAGCACGAGTTCCCCCGGCGGCGAAAAGCGACTGCGCAAAGTCGCCAAAACCTGCCGTGATCTCGGCCAACGCGTGCAATTCTCGGTCTTCGAAATCGAGGTGGACCCTGCACAATGGGCCGCATTGCGGCAGCGCTTATGCGACCTGATCGATCCAGGCGTCGACAGCCTGCGCTTCTATCAGCTCGGCGCGAAATGGGAAGCCCGCGTGGAGCACGTCGGCGCCAAGCCCAGCCTGGACCTCAAAGGCCCACTGATCTTCTGACGCGAACCGCAAGCGACCGGGGAAAGCCGGGCAGGTTCGCGCAACAAAACAAGTCATTGATTTACAAGAAAAAAACCAACCTCTTCCGCTCACTACAGGTCCGCGGCAGCCCAATTCGATTGCGTCTCCGAAGGGTTCCGCAAAAGTGCGGACTTTTTTCCAACACCCATCAGCACTTATGCTCAGGGCG # Right flank : TGGCTTGGCGACGATATGTCGTTCTATCGCCTTTGCCCACAAAAAAGGGCGCAGTCTCGCGACTGCGCCCAGCGTGCCGCGCCGGCCGGGAGAGAGTCGGCTGGCGCGATCCGTGACTGCGGTGTGCTTAGCGGGACGCGATGCGCATCACTTGACTTCGAATTCCTGCACCGTTCCGGCCGGCTGGCCGTTCACGGTGACCTCGGCCTTGTACTTGCCGGCCGGCCAGCCCTTGGCGTTGGTGAAGGAGATATTGGTGGTTTCCGCACCGGCCGTGGTCAGCGTCGCGTTCTGCTCGCCGGCGGTCTGGCCGTCCTGGAACAGCAGCTTGGCGCCGACAGCGGTGTTGGTGGAGGAACCCTCGGTCTTCACCGAGACGATGATGGTGTCCTTGCTGCTCAACGTGCTCAGCGGCGCCACCGTCTTGTCGGCGCCCGCACTGTTGCCCACGGTCACCGAGGCGACCGTCACCGTGCCGGCAGTGGCCGCGGCCGGCGCCG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //