Array 1 106407-99058 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAERQO010000009.1 Rheinheimera sp. MA-13 NODE_9_length_134788_cov_228.117823, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 106406 28 100.0 32 ............................ AGCATAAAACCCCTTGTGCGTTACGCCCTCGA 106346 28 100.0 32 ............................ ACATGCAAACCTCTGTGTCGATGGCTGCAACC 106286 28 100.0 32 ............................ ATTAAGCTATTTCAGGCTCTATCTAACTATCG 106226 28 100.0 32 ............................ TGTCGGCCCAAAGCAAAAAATAAATTATCTAT 106166 28 100.0 32 ............................ AAATGGGCCAGCGCTGACGTAAACATTAATGG 106106 28 100.0 32 ............................ GGCGAGGATGTGAGAGTTATGTGGGGTTTCAG 106046 28 100.0 32 ............................ GACCTGCGTGAAGCCGCGCAGAGTATAGAATG 105986 28 100.0 33 ............................ AACGCAAGAGTTGGTTAACAAACTAACAGCAGA 105925 28 100.0 32 ............................ TAATAAAAACCTACACCAGCGAAGGTGAAACG 105865 28 100.0 32 ............................ TTGTTCTGAACCACCAAATTGATGATATAGCG 105805 28 100.0 32 ............................ TGGTTAATTAGTGAAGCCATGTAATTTTGGCG 105745 28 100.0 32 ............................ TCAGATGGTTAAGCTAGATAAGGTGCGCAAAG 105685 28 100.0 32 ............................ GAATAGTACAATCGCGCCATTAGGCTTGATAA 105625 28 100.0 32 ............................ TGCAAGCGTCTAGGTGCTGTTATCTATCTGAA 105565 28 100.0 32 ............................ AATATAAATATCCGTCTTTGCGCTCAACTGCT 105505 28 100.0 32 ............................ GGTGAAAGCGTCTGCCCGACCAACAGCGGAGT 105445 28 100.0 32 ............................ TACACCGAAAGCCATTAAGTGGTCCCCAAGTC 105385 28 100.0 32 ............................ TTGGCAGCTATCTGTCCATCAATAACCGGCAG 105325 28 100.0 32 ............................ ATCAGTAAAAACCCGCGCAGGAATGAAACTAT 105265 28 100.0 32 ............................ TGACACATTAGTTATAAATTTAGGTAAGGCTA 105205 28 100.0 32 ............................ ATGTATAACTAGGCAACTATTTTGCCTGTGCT 105145 28 100.0 32 ............................ ATTTAGCCAAGCCGAAAAACCGGCGCCGATTA 105085 28 100.0 32 ............................ GCATAGCGGTATTGTCTATATACGGTAAATAA 105025 28 100.0 32 ............................ TAGTAGAACAAGCAGTAAAAAGCCTTACAAGG 104965 28 100.0 32 ............................ AATCAGTAACTTCTGGTTTATTAACACCGCAT 104905 28 100.0 32 ............................ ATTAAGCAATTCAATGATGGGCTAGCAAAGCA 104845 28 100.0 32 ............................ CTCAACAGCTTAAGCGCTGGTTAGACGCTGGC 104785 28 100.0 32 ............................ ATCATTGCGATAACCATTAGCTTGAGCTAGCT 104725 28 100.0 32 ............................ TTACCAATCCAAGAAGCAACTAAATGGGAAAT 104665 28 100.0 32 ............................ ACGCCGTTAAGAAACTGCTAGCGCCTGGTATG 104605 28 100.0 31 ............................ ATTGTACTTCGAAGAAACCGAACGCGCCCCG 104545 28 100.0 32 ............................ CCAAACTATGCAACACTTGACGCTGATTTAAT 104485 28 100.0 32 ............................ TGACTGTTAGCGTTAAGAAAGTAATCGCGGTT 104425 28 100.0 32 ............................ GTTTGATGAACAGCCACATGCAAACCTCTGTG 104365 28 100.0 32 ............................ CTGCGGGAAAACAGCAAAACAGCAACAACACA 104305 28 100.0 32 ............................ AAAAGCGAGGAAGCCAAAGAAGCCTGGCACAA 104245 28 100.0 32 ............................ AGGTAAAATTTTGATAGCGGCGATTGCAGCAA 104185 28 100.0 32 ............................ TGGTGTGGGTGGCTGTGGCGTACCTGCGCAAG 104125 28 100.0 32 ............................ CACCCTAAATCAGCTGCACGACTTTTAAAATA 104065 28 100.0 32 ............................ AAGCGGATTCAGTTGCTGACTCTACATAGCTG 104005 28 100.0 32 ............................ TACTTGTTGCGCTCTGTGAACGGATGGTCCGC 103945 28 100.0 31 ............................ ATAAACTACTCGCAGCATGACGGGAACATCG 103885 28 100.0 32 ............................ CTGCAATAAAGGACCGTCAAAACGCCGTTCGA 103825 28 100.0 32 ............................ CTAAACTCATCAGGTAGGCGATTCTTAAGCCA 103765 28 100.0 32 ............................ TCATCCCTGTACAGCATAGCAAGGTCGCCATT 103705 28 100.0 32 ............................ GGTAAAAAGAAAAAGGTTAGTGAATAAGTGTG 103645 28 100.0 32 ............................ TGAGCGCATGAACTCTACAAGAGCTTGGATTA 103585 28 100.0 32 ............................ ATCGGAGAAGTGAAGATATGAAGCGACCAGAC 103525 28 100.0 32 ............................ AGCTGATGCTGCGCGTATGACTCTGAGCTGGC 103465 28 100.0 32 ............................ TGCCGCAATGCTGTACCAGCGTCAGCGCCCTC 103405 28 100.0 32 ............................ ATAAACTCTAAAGGGTCTCTTGTTAAAAATAG 103345 28 100.0 32 ............................ AAGCGCATCAGTGATATGATCAAGCCCTAAAG 103285 28 100.0 32 ............................ ATTATGCGCGCACCAATCCGCCACTAAACACC 103225 28 100.0 32 ............................ AAAAGCCAACTATTGAAGCGAGGTAAGAATCA 103165 28 100.0 32 ............................ ATGCCAGCTATTACCAGCGGTTTACTAGCAGC 103105 28 100.0 31 ............................ ATTGATGCGCAAGCGAAATCATACTTAATGT 103045 28 100.0 32 ............................ AAAGGAAAACAGGTCAGAGCCTAGCAGACTTT 102985 28 100.0 32 ............................ CTAAACTCATCTGGCAACCGATTCTTAAGCCA 102925 28 100.0 32 ............................ GTGAGCCGGCAGAGCGCTACAATGCGTACACC 102865 28 100.0 32 ............................ ACTACTTCACCGCAACAAACCAAACGAGGCTC 102805 28 100.0 32 ............................ AACAAACGTTGCTACACCGGCCATGTCTACAG 102745 28 100.0 32 ............................ GCTAACGGCATTACGCCGACTTTCAAAGGTAG 102685 28 100.0 32 ............................ GTTGAATCAACAACGATAAGCGCACCGGATGC 102625 28 100.0 32 ............................ GAAAGGTAGAACACCTCCAAAATCAACAACAT 102565 28 100.0 32 ............................ TCGCAATAAAGTCTTGGCACTTACTGAATATG 102505 28 100.0 32 ............................ TCTAAGCCGTCAAGCTCGATGCGTTGTAATAT 102445 28 100.0 31 ............................ ATCCAGACCCAGCGGGGCGAGCAAGAAAAAC 102385 28 100.0 32 ............................ AGCAAGGACTTGGCAAAGAGAAGGTGGCAGAA 102325 28 100.0 32 ............................ AGTTACGGTCTTTCTTCCCACGTCAGCCTAAA 102265 28 100.0 32 ............................ TGTTACAGGGTCGTATTCAATCCGCGCAATGT 102205 28 100.0 32 ............................ GTCGAGCGCGCCATCACGAAAGCCATTAACGA 102145 28 100.0 32 ............................ ATTAGCCGCTTGGCGTAGTTCTTCAGCCATAA 102085 28 100.0 32 ............................ AACACTGGTGACTATTCTGCTGCAACCAACAC 102025 28 100.0 32 ............................ ACAACGGCTATTTTTATGCACGCCGCCAAGCC 101965 28 100.0 32 ............................ TAGCCGAAGTTAAGGCGCAGGCTATTGATGGT 101905 28 100.0 32 ............................ AAGCTAAAAACCGTCGAGCTCGCCATCACGAA 101845 28 100.0 32 ............................ AATAGCAGCCGCTGCACGTACTATTGCACGGC 101785 28 100.0 32 ............................ AGATGGCGCTGACTGGCCTTTTAAAAGAAATA 101725 28 100.0 32 ............................ AATGAAATTGCCGACTTGAACACGAATGTCTT 101665 28 100.0 32 ............................ TAGCAGCCATAACCGGCGCAGCTGGCGCAGAC 101605 28 100.0 32 ............................ GAAAGAGCAGCGCAAGCAAGGATTGCAGAAAG 101545 28 100.0 32 ............................ ATCAATATAACCCATAACTTGCGCCTTAGTGG 101485 28 100.0 32 ............................ GCGACATGTCTCTTGAAATTGAAAAGTTACGT 101425 28 100.0 32 ............................ TGCTTAAGCACGAATTAAGCCTTCAGAGAGTA 101365 28 100.0 32 ............................ TGGGACGAAACGAACGGTGGCAAGTCTCCAAC 101305 28 100.0 32 ............................ ACTGTCCGAGCAGGAGCACGCGGCTTACTTGT 101245 28 100.0 32 ............................ TGACAGCAGGCATTACATTAAGCCCTGACTTT 101185 28 100.0 32 ............................ TTGGAACACCAGCACACCGGCAGCACTCACAC 101125 28 100.0 32 ............................ GCGCAGACAGGCGGGTAAGGCAGTGGCGTTTG 101065 28 100.0 32 ............................ TTACTTAAAAATACATCCAAATTTACGCGAAC 101005 28 100.0 32 ............................ TTAGAAAAAATCCAATCTACAGCCTTTTGCAC 100945 28 100.0 32 ............................ TGATTCCATTTGACCGAAACTAACGTTTAAAA 100885 28 100.0 32 ............................ ACTGGCCGATTGCCGGTTGTGGGTCGCTGGTT 100825 28 100.0 32 ............................ TGACGTTAAAAGAGAAAATGGGGGAGCTTGAT 100765 28 100.0 32 ............................ CAAAAAACAAGGAAGTAGCAGAGTTCAAAGGC 100705 28 100.0 32 ............................ TCGCTGGATTGGCTAGCGGCGTTATATCAAGC 100645 28 100.0 32 ............................ TGACGCGTACTCATAACCCACGACATGCAGCT 100585 28 100.0 32 ............................ GTGACGATAACGAAGAAAGCGACGTACCGAAC 100525 28 100.0 32 ............................ TTGCAGGAACTTAGTAGGGTTGCCGGATATAT 100465 28 100.0 32 ............................ TCAACCCAATCGTTTTCTAGTCTGCGCAATAG 100405 28 100.0 32 ............................ GTCGAGCTTGATACCCTTTACAGGGTTAATAA 100345 28 100.0 32 ............................ GTGCTGAAGATCAGCCTCAAACGTGCGGGTCT 100285 28 100.0 32 ............................ AGCAAGAGACCATGCAGTTAGCGTTTGGCCTT 100225 28 100.0 32 ............................ ATTATCCGTACTCTGCCGCATATACAAATCGA 100165 28 100.0 31 ............................ ATAAAATGTACAAAAACCATTATTTTTATCA 100105 28 92.9 32 G..........C................ ATTCTGATGAAGCCCCAAATGAAACCGGGTAT 100045 28 92.9 32 G..........C................ CTCAACGCATTCCGGATCAGGTTCGCAGTTGC 99985 28 92.9 32 G..........C................ GGAAGCGGTTAAGCGTTAAGTCAAAAATTATT 99925 28 92.9 32 G..........C................ ATAGGCTCGCCAGGAATGTGTGGGATTTCAGC 99865 28 92.9 32 G..........C................ ACTGAGCAACTGCAAAACGCGCTAATCGGACT 99805 28 92.9 32 G..........C................ AACACTGGTAATCGTTCTGCTGCAACCAACAC 99745 28 92.9 32 G..........C................ TGAACTGCCAGCAGAAAAAATTGATAATAGAC 99685 28 92.9 32 G..........C................ AGACATGAAAATCCTCCCGCCTTCTTTGAATG 99625 28 92.9 32 G..........C................ AGTATACGCTTTTGAGTCATCCGTAAACCCAA 99565 28 92.9 32 G..........C................ ATTATCCATCTGCAGAATGCCATCAGCGTTAC 99505 28 92.9 32 G..........C................ GTAGATAGCTTGCAGAGCAGATTGCTGTTGCT 99445 28 92.9 32 G..........C................ TTGATACTGCTTAGGTACTAAATCTGAACAGC 99385 28 92.9 32 G..........C................ TCACCCTGCGATGTTGACTTGCACAGCTCAGC 99325 28 92.9 32 G..........C................ AGCAACAGCAGGCTCAGTACATTCCACAGCAA 99265 28 92.9 32 G..........C................ ACTTTGTGATCTGCTGCACTTCTTCGTCACTA 99205 28 92.9 32 G..........C................ ATTAAGCGACATGACGCCGCGCCCTTGGTCGA 99145 28 96.4 32 G........................... ACAGCGCTAAACGCTAGCGCTTTGCCGTATTA 99085 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 123 28 99.0 32 CTTCACTGCCGAACAGGCAGCTTAGAAA # Left flank : CTGGGGAAGTTAATGGCGCAAAGTTGGTTAAAGGGGCTCAGAGATTACTGCCAATGCAGTGCGATACTGCCAGTACCTGCTAATGCCAAGCAGCGATATTTTGCCCGGCGGCAGGTTAAAAGTGTACATAACAAGCGTCAACGCTCCATCAGCAAAGGCTGGCTGACGCAAGATGAAGCTATGACGAAGATTAGTGACGACTCGCAGAAGCTGCTTAAGCTACCATTTTTGCAACTAACCAGCCGTGGCAATAAACAACAAATGAATGTATTTGTTGAGCAAGGACCGGTAATTGATTTACCAACTGAGGGTAGCTTTAATTCCTACGGATTAAGCCGGCTATCCGAGAAAGTAACGGTGCCTTGGTTTTAACCCTTTTTTCTAAGCTTAGCTGCAGCCCTTAAAATTCAAGGGCTGTTTTTATCTTTTAAAAAAAAGGTAAATCTGCGGAAGCACCAACAGCTCTTTAAAAATTAGGATTTTAGTGCTTAAATGCTTTA # Right flank : ATGCGCCGCTCCTCGCTCGTTCGTCGCAGGAAAAGAAGCATCAGCGAACAGTAGGGGGCGATGCCCGGTTAGATACCGACGATGGTGGGCATATTATCGGCCACCGCTTTATGAGTGACCAAGGCTTAAAAAACCTGTTCCCGCAGGATGCAAACTTAAACCGTGGCGCTTATAAATCCATGGAAAATGAATGGGAAGACTGGACTAAGGAAGGTTATGAAGTAAAACCAACCGTCCGTTTAGACCCACCAGGTTCAGCTAGACCAGATAATATTATTGCAAATTACAACGTTCACGATCCTAAAACAGGAAAAAGAGTTTTCAGGCGACGACATGAATTTAACAATGTCAAAGGCGAAACATTTAACCGTGTGAATCGCAAAGATATGCAGGGCTACAGAGACTAACTATGAAAATTGATCCGAAATACATTCAAGAGCTTGGTGCGCTGGTAATTCGCAGTGAGGATGTTGTCGAAGAGCCAGAATGGAATGCGCTCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGAACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //