Array 1 28582-29586 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMKE01000008.1 Sphingomonas sp. Leaf10 contig_16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 28582 29 100.0 32 ............................. GTGACGTTCGGGGCAGCAGTCGTCTTGGCTAC 28643 29 100.0 32 ............................. ATGTTTTCGAGCGGCCGTGAGTTCGGCCGCAA 28704 29 96.6 32 ............................T TTCCCATTTATGGGCAGGCGATCGATACTTCG 28765 29 100.0 32 ............................. GCCCATACCCGGTCTAGCGCGGAGTTTGCTGC 28826 29 100.0 32 ............................. TGCATTTGATGGACCCGCGGCTTTGTTCGCCG 28887 29 100.0 32 ............................. ATGCGGGTCGCTTCTAGATACCGCGCCTCGTT 28948 29 100.0 32 ............................. ACGGTTGGCGGCAAGGGGCAGTATACCACTGC 29009 29 100.0 32 ............................. GACGCGAGTAGCCACGCAACCGCTTGATGCCC 29070 29 100.0 32 ............................. CGCTGGAAAACTCGGCCCACGCATTGGTGAGA 29131 29 100.0 32 ............................. CGTTCGCCGCGTACGACGACTACACCGCCGCC 29192 29 100.0 32 ............................. CTCCCACTTTTTCGTCGTGTAGTTGCGGGCAA 29253 29 100.0 32 ............................. CCAGTCCGGCGACGAGCGTTGATCGTGTCGCC 29314 29 100.0 32 ............................. TTGCAAATGGTGCTGTCGATTCTCGCTTTCGT 29375 29 96.6 32 ..............T.............. GCCTGCACCTGTCGGCGGTAATCGTCGGCGAT 29436 29 96.6 32 ..............T.............. CCATCGGCAAGATTCTCAAAGGCCCCAACTTC 29497 29 100.0 32 ............................. CTGACCACCTACCGGGGGCTGGTCGAGAGCGT 29558 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 17 29 99.4 32 GGCTCCCCCGCACCCGCGGGGATCGACCC # Left flank : ATGATCGACCGGATCAAGGCGCTGCTGCTCCCCGCCGCCGGGCCGCCCGCCGATGCTTCGCCCGCCGTCGTGCCGCTGCCCGAACCGAACTGACGCCGTGCCGCTGACCGTCGTCATCACCCGCGACGTCGAGGATCGCTATCGCGGCTTCCTCGGCTCGGCGATGCTCGAACTGGCGCCCGGCGTCTATGCCCAGCCCCGCATGAGCGCGGGCGTACGCGGCCGCATCTGGACCGTCGTCGAGGAATGGCACACCCGCTTGCGCCGCGGCAGCATCGTGATGTGCTGGGCCGAACCCGCCTCCGCCGGCGGCCTCGGCCTGTCGGTACTGGGCGAACCGCCCAAGGACGTGATCGCGCACGACGGCATCCTCCTGGTCCGCCGCGCACTGTCCGCGCGACAGACACCGCAGCCGCCGGAGCCGCCGGGATGAGGTTGGCGGGGGTACGAGAAGGACGGTCTTTGACATCGTGAAGGAATCGAGGCAGTTAGATGGCAGA # Right flank : CGACTGACGCGCCGCTGTTTGCCACAGAAACCTGGCTCCCCTGCACCGGCGATAATTTATACACGCCGACTTCCCGGCCCTGATCGCAGCGTCGGCGTTTATGAATTCCGACCCGTGCAGGAACGACGATCCGCTGCCACCCCCTCCACGATCGCCCCCGCCGCCGCCGACACATCGGCCCACGTCACCTCGAATCCCGCCGCGCCGCCGTAATAGGGATCGACCACCGCCTGCCCCGTCCGGCCCGGCACGGCATCCATCAACAACCCGATCCTCGCGGTCGAATCCTTCGGCGCCCGCCGCCGCAGTTCCGCCAGATTGTCGCGGTCGAGCGCGAGGATATCGGTGAACCGCCGAAAGTCCGCCGCCACGACCTGCCGCGCGCGATGCCCCGAAATATCGATGCCATGGGCCAGCGCCACCGCCTGCGACCGCGGATCGGGCGGGTTGCCGACATGCCACGCGCCCGTTCCCGCCGAATCGACCGTCATCGCCACCCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACCCGCGGGGATCGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA //