Array 1 333648-334646 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PKGU01000002.1 Alloscardovia omnicolens strain UMB0064 ERR1203653.17957_1_65.2, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	====================================	=============================	==================
    333648	    36	 100.0	    28	....................................	GCACGTCCACTTCCATATAATTATTATC 	
    333712	    36	 100.0	    28	....................................	TAATGCAGGAATCGCCAAAGGCACTAAC 	
    333776	    36	 100.0	    29	....................................	TAATGTCAGTTGCTAAATCCTCTGCTAAT	
    333841	    36	 100.0	    28	....................................	CCTTGCCGTTACCTTGGTGTTTTGCGTC 	
    333905	    36	 100.0	    28	....................................	AAACCATACAGCGAGCATTCCATCCGTG 	
    333969	    36	 100.0	    28	....................................	AGTCGCCTCTGTAAATCTGGCTAATTGT 	
    334033	    36	 100.0	    28	....................................	TTATACTCCTGATGAAATGCATGATATG 	
    334097	    36	 100.0	    29	....................................	AATAGCTGTTCGAATAGATTGTTAGGTAT	
    334162	    36	 100.0	    28	....................................	TTAAACCGTAACGATAATTCATATGCGT 	
    334226	    36	 100.0	    29	....................................	GGTCTATGTCGTGCAATAAGTTGTGATTT	
    334291	    36	 100.0	    28	....................................	GAACCTAGCTATTAGTATCACACCTGAT 	
    334355	    36	 100.0	    28	....................................	TACTGAAGTAGATAAGCTTTATTTTTTT 	
    334419	    36	 100.0	    28	....................................	CCGGTTTGCTCCTCAAAAATATCCGCTT 	
    334483	    36	 100.0	    28	....................................	CCTTGCCCTTAGATACGCCTTTAACGAG 	
    334547	    36	 100.0	    28	....................................	TGATTATTTAATTTCCGCTTACGTCTTC 	
    334611	    34	  88.9	     0	.C......T...--......................	|                            	T,G [334631,334634]
==========	======	======	======	====================================	=============================	==================
        16	    36	  99.3	    28	CTATTTTACCAAAGAGGATGAAAGCTAATTCACAGC	                             	       

# Left flank :   CAATGGAGAAGGTCTAACAATTCTAAGTAAAATTAATGATTTTGCGCAACAATATGCACTATATGTTGAAGATAAAATTCAGCAGATTGCAATTCCACAATACGTTAAGGATTAACCATGAAAGTTGATGAGGACAGTGGGGGAATGTGGTGTTTAGTAATGTTTGATCTCCCTGTTCAAACGAAGCAACAAAGACATGCTGCTGTAGTATTTAGAGATTTATTACTCGATATGGGTTACTGCATGATTCAGTTTTCTGTCTACGCAAGATATACGCCAACAGCTGAAGGAAATCGTTCCACAGTTCGGACAATTAAGGATAATTTGCCACCGCAAGGCAAAATTCGAGTCTTACATATTACAGATAAGCAGTGGTCGAAATCGTTACGATATGTGAATCTAGAAGAAGAAAATGATGGTGAAACACCGAAAACTTTAATGCTTTTTTAACTGCGAAAAGCCTTGAAAATGCTGGAATCATCCCCTTTGATTAGATTACT
# Right flank :  CAAGAATGGTGTAATCCTAGACAACGTGAATTGTATCAGAGGTTGAGAGATTTTTCGATCCTGAGTAGGTATTGTTCTAAATGAAATTCGTTTGTTGTCATCATGTTTTTGGGTGCATCAATCATTTTGGTAAGCGAGGTCTTATAGCTATCGGAGATAGCCCACACCCCTTAACCGATTAACCCCCATATTTCCCAACGCTCCCACACAATCAAAAAATCTCGAAAATATCGTTAAATTTTTCTCCTTTTTCAGCGTGTTGCACTTATATAGAGCACCCGGTTCGCGTTAAAGTAGTGTACGCGCGAAAACACGAAAAGAGAGTGCAAACAGCACGACGATAATCAACGTACAGCACAGAAGACAGGCCAAGGCGGAGAGCGTGTACGAAACGCGAGAGGGGAGCGGCGAGAGCGAATCAGCGCCGCAACGCGAAACAAGAAAAAGCAAAAATAAAGAAAACAAAACCTCAACAAACCGAGGTAATGCTGCGCGACCAG

# Questionable array : NO	 Score: 3.22
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTATTTTACCAAAGAGGATGAAAGCTAATTCACAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.90,-0.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//