Array 1 839379-837519 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMWC01000002.1 Streptomyces lomondensis strain JCM 4866 sequence02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 839378 29 100.0 32 ............................. GACCGGATCATCGTCGGTATCGACCTCGGTTC 839317 29 100.0 32 ............................. TGCTTGACGTGCTCCGCGATCCGTTCCGCCAA 839256 29 100.0 32 ............................. AACCCCTCACCCCAGCACGGCGACCGCCCCAC 839195 29 100.0 32 ............................. GTCCCGGTGGGCGAGCGGACACCGGACCACTG 839134 29 100.0 32 ............................. TTGCGGGGCTTATCGTCACGCTGGCGGTCAAT 839073 29 100.0 34 ............................. CCCCCCGCCCCGACTGGGTCCGCTCCGAACAACT 839010 29 100.0 32 ............................. CACCTGCGCCAGCCCGAAGCGGTGCTCACGCC 838949 29 100.0 32 ............................. GTCGACAACGCCGAGCTCACCGTGCAGGCGCT 838888 29 100.0 32 ............................. GGCTCTGTGGCCATCAGCAGGGCGCCTGAAGC 838827 29 100.0 32 ............................. GTGCGCTCAGGGAGGTCGTTCCAGGCGTGGAA 838766 29 96.6 32 ............................T CACCAGCAGCGGCCACACCGTCACCCCAGGCA 838705 29 100.0 32 ............................. TCGACGAACTCGCCGAGGCCGAAGGGCGCGAC 838644 29 100.0 32 ............................. CTGCGGGCCATGCAGGACGCCGGCTGGGATAT 838583 29 100.0 32 ............................. ACGATGACGCTGTTCCCGTCGATCCTGTCGAA 838522 29 100.0 32 ............................. GTCGGCACCGCCGCGTCGGGGTCGGGCTTCAA 838461 29 100.0 32 ............................. GACGCTTCGCGCCGTGCCTCGTGCATCCCCTC 838400 29 100.0 32 ............................. CGCGAGACCGCGATGATCGGGCGGGCGTCGGG 838339 29 100.0 32 ............................. GGCTACCTGATCAGGACCGAGACGTCCGACAT 838278 29 96.6 32 ............................G AGAGCAGGACAGACGGGTCGACGACGACGCCG 838217 29 100.0 32 ............................. GGGCAGCCCCTCGTCACCATCCACCCCGACGG 838156 29 100.0 32 ............................. TCGATCCGTGTGAAGTGGTGGTCGGGCGAGTT 838095 29 100.0 32 ............................. GGCTGCCCCTGGTGGCCGCACAGCAGCGCAGT 838034 29 100.0 32 ............................. CGGACCTGCGTCGCGGTCGGGGGGTCGTATCG 837973 29 100.0 32 ............................. CGCACTGCTCGTGTTCAGCCCCGACGCCGAGG 837912 29 100.0 32 ............................. TCCCCGCAGCGCACCCGTTCCCGCCCAGAGCC 837851 29 100.0 32 ............................. ACCAGCTCAGCGCCGATGATCTGCGCGAGCGG 837790 29 100.0 32 ............................. TACACCGGCCCCCTGCGGGTGTGGGTGTGGCA 837729 29 100.0 32 ............................. GGCTACCTTCTCAACAAGAAGGCCAAGGCAGC 837668 29 89.7 32 G............T......A........ CCGATGGACTGGCAGGACATCGAGCTGGACGA 837607 29 96.6 32 G............................ CCGTAGGATTCGCCGTCCTGCGAGAACAGCAT 837546 28 86.2 0 G.................T...C.-.... | ========== ====== ====== ====== ============================= ================================== ================== 31 29 98.9 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : AAGGCGGGGGTGGCTTTGCCGATGTCGTGCACGCCGGTGAGCCATACCGCGAGGGCGCGAGCGTCGGACTCCCCTTCCGGCAACGCCTCGGCTACCAGCCGTCGCACTCCTACAGGCAGCCACTGGTCCCATAACAACCCGGCCACCGCGGCACTGTCCTCCATGTGCCGCCACAACGGCAGCCAGCCCTCAGCATCCCGATCATGCTTGGCCCACACCGACCGTGCCGCTTTCCCGAGGCGACGCAACATGCCGGCTTTGGCATTTCCCCCACCGCTCATGAACGATTGATACAGCGAGGCTGCGGCGGCAGACAGCGGAATCCGCGAATAGGCAGATCCTCAAGAAATCCACCCACAGACACCTTATGCTGATCGGCTTGCTGTGGATCTGCAGCAGAGCGCCAGGGGACTCGGGGGTGCGTCATGTCTAATTTGCCGGAATCCTTGATAATCAGCGAAACCATGTCCTCCCCGCCATAACACCGCAGGTCATCCAGT # Right flank : CGTGCTGGCCGAGCCGGAGAGGTGCCGGGTCAGGGCCGGACTCATCACGGCCCGGGCTGACGGCGATAGGGGGATGCCCGCGCCCGTTCTACCTGGGCGCCGGAGGCCTGCGATGCTTCCCGGTGCCGGGACCGAGCGGCTTCGGCGCCGGCCCCGCAGGCGCAGCCCCGTTCGCCTCCGGGTAGAGGAGCGCCTTCGCCTCCGTCAGGTCGGCGGCGTAGGCGTACGGCTCCCAGGCGTGCCCGTTCCAGCGCTCGATGACACGTGGGGCATCCGGCTGTAGATGCGACCCCCGGGGGCCGTCGCTGGAGACGACCGGTACGGCACGAAGGCGGCCGATCCTCGCGTCGCGGCGTTCCGCCCAGTCCTTCAGCGGTTCGTCGTCCATGCTGGCATTCCTCGCGTCGGCAGCGGCTGTTACTCGGGAGCCCAGGAGAGTAGCGGCCCAAGAGGTCCCCTGGCCGAGGACTTCACGGCGGCCCCCCGAAGGTGTGGTCAGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 849024-850517 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMWC01000002.1 Streptomyces lomondensis strain JCM 4866 sequence02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 849024 29 100.0 32 ............................. ATCCCCGGCACCGCGCGGCCGACCGTACCGCC 849085 29 100.0 32 ............................. GACAACGAGACCGCGTGCAGCGTGGCGGTGAG 849146 29 100.0 32 ............................. GTGGTGGGCTTCTGGAACGCCTTGGGGACCTT 849207 29 100.0 32 ............................. TGGCCGCAGGACCCGCAGGCGCCCCAGGACCA 849268 29 100.0 32 ............................. GTCACCGTAGACATCATCCCCTGAACAGGAGA 849329 29 100.0 32 ............................. TTCGCCCCGACGCCCGCGAAGTCCTCCTCAGA 849390 29 100.0 32 ............................. CTGTGGGCCATCGCCGACCAGTGCCCCGGTGA 849451 29 100.0 32 ............................. TTCAACCGTTGCCGGGCCTCGGGCGAGAGCCG 849512 29 96.6 31 ............................G ACCTCTCCAGCGTCAAGCTGTCCACGGCCGT 849572 29 100.0 32 ............................. TCCTCGCGGACCGGAAACGACAACTCGTCAGG 849633 29 100.0 32 ............................. ACGGACCCGATCGCGCCCTTGATGGAGCCGAG 849694 29 100.0 33 ............................. CGACCCGGCTGACCGTCGCGCAAGCGCTGGTCC 849756 29 100.0 32 ............................. TGCTGCTGTCCCACATCGAGGCGGGCACGGTC 849817 29 100.0 32 ............................. TGGCGGTCCTGATCGGGATCCTGTGGGGCAGG 849878 29 96.6 32 .............G............... ACCAGCGCGCCGGGGGTCTTGAGGGCGGTGGC 849939 29 100.0 32 ............................. CCAACCGTCACAAGGCGTGGTGCTCATGAAAC 850000 29 100.0 32 ............................. CTCGAGGTAGCCGTCCGTGCGGACGTCCAGCT 850061 29 100.0 32 ............................. GACAAGATGGGCCGCCCCGTCGTCCGAACCAT 850122 29 100.0 32 ............................. ATGCGGCACGACTGGCAGCCGCTGCGCGAGGG 850183 29 100.0 33 ............................. CCCCCGTATGCCCCCGGATTAGGTGAACAGCAG 850245 29 96.6 32 .....T....................... TTCCAGCTCACCGACCCGCAGACGCTCACGGT 850306 29 100.0 32 ............................. GGCAGCGTGAACGTGCCGTAGTCCCGACCGTT 850367 29 96.6 32 .......T..................... GCCGTCACCAACCGGCTCAAGATCGCATCGGT 850428 29 93.1 32 ..A......................C... TACCCGGCCGCCGCCTGATGTTCGGCCGTTGG 850489 29 93.1 0 .........................C.G. | ========== ====== ====== ====== ============================= ================================= ================== 25 29 98.9 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGGCCATCAGGTCGCTTCCGGCATCAACTACGACGGACCTGACGACTACGGGGATGAGCTCTGGTGACGATCATCGTGCTCACCAACTGTCCGGCCGGCCTGCGCGGCTTCCTCACACGCTGGCTGCTGGAGATCTCCGCGGGCGTGTTCGTAGGCAATCCGTCGGCCAGGATCCGCGACGTCCTCTGGGACGAGGTCCGGCAGTACGCAGGCCAGGGCCGCGCCCTACTGGCCCACACCACCAACAACGAACAAGGCTTCACTTTCCGCACGCACGACCACACATGGCACCCGACGGATCACGAGGGCCTCACCCTGATCCACCGCCCCAACCTGAGCGCACCCGCCCCCGACCGACGGTCGGGCTGGAGCAGGGCATCCAAGCGCCGACGCTTCGGAGGACGCTGATGCGCATCGAGCCCCGCATGACCGATTTGCCGGATTCAAAGAAAGTGCTCGAATACGGCACCCGGAGCTGGTAAATCCCCAGCTCACCCAGC # Right flank : CTATTCGGCCTCCTTCGTCGAACGGAGCGCTGTCTAGTACCTGGGCCTAATGCGCTGCACTGAGATCAGGGCCTGAGCCACCCGCCCTGCGAGGGCCCCCGGCGCATACAACCGGGGCGGAGCCCGAAAGCGCCGCCCCGCCCTAAGTAGCCTCAGCTCAGGGCCACACCAAGCAGTACGGCTGGTGCCCCGCCTCATGCAACCGATGTGAGAAGTCCTGCCACTCATGCAGCAGTTGGTACACGTTGAACGCATCCCGGGGCCCACCCCGGTCCGGCACCGTCGACCAGATGAAGGCTGCCGCGCCCACCGCCTCCTCGCCGATCCCGCGCAGGGGGTCGACGACCGTCATGGGGAGTTTGACGACCGCGTAGTCGGGGTGCAGGACGACCAGTTCCAGGGGCGGGACCTTGTGCAGGGGGACGCCCTCGATGCCCGTGAGGACCATCGCGGCCATGGTCTCCGGCTTGATCTTCGTGAACATGCCGTTCATGCCCAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //