Array 1 41581-40888 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NTUL01000048.1 Bacillus cereus strain AFS016365 AFS016365_119_F9_Contig48_140618, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
     41580	    32	 100.0	    34	................................	ATCGAGTTTTCGCTCGATGAAGCTACCGCCTTTA 	
     41514	    32	 100.0	    33	................................	TCAATATGTTTCCCTATCTTTTTCGGAATTAGT  	
     41449	    32	  96.9	    34	...................T............	TACCTCGGGTTTATATTTATCTGGAACGTTCATA 	
     41383	    32	  93.8	    34	.........T....G.................	ACAACCCTTCCACTTCTTGGCTTGGCTGCCAAAC 	
     41317	    32	  93.8	    34	.........T.A....................	ATCGTGTTCGGGGCTGTTAGTTGCTCGAATGGTA 	
     41251	    32	  87.5	    33	.........T.AG.......A...........	TACTCCATATGCTGATGAATACGATCTATCTAA  	
     41186	    32	 100.0	    34	................................	TCTGCTAGGATTAGTACTGACATGTTTTTACTTC 	
     41120	    32	  93.8	    35	.....G...T......................	TGAACAGAGCAAGAAACGTGCTGAAACGAACACAT	
     41053	    32	  93.8	    35	.........T..........A...........	AAGTACTGGAAGAAGAACAAAAAGGATGATAAGGT	
     40986	    32	  93.8	    35	........CT......................	ATGGTTGATATGAAACCAAAAGTTACACCATTCCA	
     40919	    31	  87.5	     0	.........-...........CA........G	|                                  	A [40904]
==========	======	======	======	================================	===================================	==================
        11	    32	  94.6	    34	GTCGCACCTCATATAGGTGCGTGGATTGAAAT	                                   	       

# Left flank :   CAGGTTGCATTAGAATTTTTAAAATTACATCAAAATATCAAGGATACGCAATCATAAATCTTTTTACAGTGTAATTATAAATCATTAAGGTTTTTTAGTTTGTTGATACCTTTTTTGGACGGATGTTTTTTCGTGTATGAAAAGATACTTTAAGATAAGCAAGATAGTCAGAAGAGTTGGATTCTATTTGCTATTACTTTGGCCCCAGTTATATAAAATGGTGCTATCCTTTTCATGTTTTTAGGGTCTGTTGAAAAGTTAAATTTCAAATTAAGGTCGAACATATTCTGTAAAAGAATGAATTGATTTAGAAAGTCCTTTAATTTTTTAGGTGCGAATGTATAGCAAACATAAAATTCCTAGAACTTTCGCACCTAGAATTTTCATAATGTATGATGGGAATTTATGATTTTTATAAAAATTACTTTATTAAATAAAAATATTTGTATACTTTTGAATAGAATTAAAGTATTTGTGCTTGATTTTGAACACAAATCGGT
# Right flank :  TAGTAATGCTCTGGCTTTAAAACGCACTGTAGATGTAGATACTCAACTGGAAGTATCTACATCTACAGTATCTAACAAACATGTAAAAAATATAAAATGGAGGGAGATTGAATGACCTACATTGCTCATATACGCGAGAGTGACAGGCAAGTACAAACAGTCGAAGAGCATTTATTAGGAGTAAAAGAACTAGCTGAAACCTATGGAGAAAAAATCGGTATAAAACATTTAGCTGGTTTAGCAGGTATGCTCCATGATATGGGTAAATACACCAATGAGTTTAAAGAATATATATTGGAAGCAGTAAATAATCCTAATTCTCCACCTAAAAGGGGGAGTGTTGACCATTCAACTGCAGGGGGGAAATTGTTATATCAATTATTCCATACAGAAAATATGATTCCTTACAAAGGGATAATATCTGAGATAGTGGGAAATGCCATTATATCTCACCACGGATACCTTCAAGATTTTTTAAATCCAGATTTAGAATCGCCCTA

# Questionable array : NO	 Score: 8.44
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCTCATATAGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         R [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.50,-2.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [11-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,9.68   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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