Array 1 6213-5164 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGICB010000004.1 Wohlfahrtiimonas chitiniclastica strain DSM 108045 NODE_4_length_196313_cov_254.250290, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6212 28 100.0 32 ............................ TTTTTCATGCTTAATTAAGAAGCCTGCAATCG 6152 28 100.0 32 ............................ TAATGCCAATGCTGCATCGTCATATGCTTTGC 6092 28 100.0 32 ............................ ACCTGAATTAGTAAAGAATTTAACTATCACTT 6032 28 100.0 32 ............................ ACACTGCCAACTGTGGTCGAGTCTTAATGTGC 5972 28 100.0 32 ............................ TCTTTGGACGATCTTTTCCGCCTGACCGTTTC 5912 28 100.0 32 ............................ TTTGGTTTTGTGTCATCAACCCAGTCTATTGT 5852 28 100.0 33 ............................ ATTGAGCAAAACATCGTTGAGCGTACTGTAAAT 5791 28 100.0 32 ............................ GCCGTTGGATTTAATGCCAATTCTCTAATCCA 5731 28 100.0 32 ............................ GCCCTGCTTTTATCACATAATGCACATTCATC 5671 28 100.0 32 ............................ GACATAGTAGGGATATGATACCATAGGTTTAT 5611 28 100.0 32 ............................ TCTCTTTCCTTGCTCGTTCCTCTTCTCGTGCT 5551 28 100.0 32 ............................ CCGCATTCTACTCCTGGTGATGAATAAAGCAC 5491 28 100.0 32 ............................ TCGCAACACTTTTGCATGCGCCCTATCTCTAT 5431 28 100.0 32 ............................ ATGCCGCTGCCGTCATCGGTGCTGCATCTAAG 5371 28 100.0 32 ............................ TGGAAACGCATTTCTTATTCCGGGCGAAGGGA 5311 28 100.0 32 ............................ GAACAAGCACATGCTCACATCGCGCGGCGTTA 5251 28 100.0 32 ............................ CACAGTGACGCGCACACTTGTCACTTGCTGAT 5191 28 96.4 0 .............T.............. | ========== ====== ====== ====== ============================ ================================= ================== 18 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TTGAATGCAGGTTCGTGGCTGTCACGCTTGACGGATTATGTGCACATTTCTTCCATTAAGCCAGTGCCCAATCGTGTGACGCATTATGCGATTTATCAGCGTAAACAGGTCAAAAGCAGTGTTGAGCGTTTAGCGCGTCGCTATGCTAAGCGTAAGCATGTGACATTTGAGGATGCCATGGCACATTTGAATGGCAAAACGCCAGAATATTGTGATTTGCCTTATGTTCAGATGAAAAGTGAAAGCACGGATCAACGTTTTCATTTATTGATCCATAAAGTAAAAGTGACAGCACCAACGGAGGCTGCAAACTTTACAACGTATGGTTTGAGTCATCATGAACAATTGTCTGCTGTCCCTGAATTTTAACCAATGTTTTTTGCTCTTTAAAAATTTGGATAAAAATCAGTAGCTTATAAAATAAGGAAAAATCATTGGTCTCTTTAGGTAAACTAACTGCGATCAGTGATTTTTCCTATCTTTTGTGCCGAAATTTTACT # Right flank : AGTGGTTCCATGGTGAATTTGGAAAGTTTGCGGTTCACTGACTAAAAATTGAGAGTTTATAAATGACATTACTAAAAGTGTTGGTACGACCTTTGTTTGTGTTGAAAATTCATTCATTACATCCTTGCCAGTGTTTGCGGATGCCAATAGCAATACCGGTGGCAGCACACAATGGAATAATTCAGTGAACATTAAAATGTCCATCGATATGTATGACAATGGCGTGATGGATATTGGTGTGAATGCAGAAATTGAAAATAAAAATGAAATTTCAGACAGATTTAAACATTATTGCGGCTATGTGCTTGGGCGTTTATTCAGTGGTCAGTTGTATAAACGCGGCTGGGTGAATAATGAGCATTTTGGTACAAGCAGCCATTAAGACTGTTGCATTTGTAGCCATTGATCAAGCGCGTTGGCAAATTGTTGACGCTCTTTTTGTGATAATGGTGGTGGACCTGAAGTTTGTACGCCACTTGAGCGTAATTCATCCATAAAGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 158022-156731 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGICB010000004.1 Wohlfahrtiimonas chitiniclastica strain DSM 108045 NODE_4_length_196313_cov_254.250290, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 158021 28 100.0 32 ............................ ATGAAAGGCATTGTTGATTACAAACATGGCAT 157961 28 100.0 32 ............................ ATACCGAACGACTTTTTAATGTAGTCAAATAC 157901 28 100.0 32 ............................ GATAAGTCAGGCTTTCTTCGCGCTTCGGGTTC 157841 28 100.0 32 ............................ TCGAGGGCGTCATTGGTGTGATCATGTCTGCA 157781 28 100.0 32 ............................ ATTTGCTTCTTTGCATTTAGATAGCCCATTAA 157721 28 100.0 32 ............................ AAACTCAGTCAATGATCCATGCTCGTCGATCA 157661 28 100.0 32 ............................ CACGGGGTTGGGCTAAAATCTTTTTATGTGCA 157601 28 100.0 32 ............................ TTTTGGTTCTACTACCGGCTCGCCGTGTGGTG 157541 28 100.0 32 ............................ ATCGTCGCAATCTGATACTTCGAGAGTATCAA 157481 28 100.0 32 ............................ TAGATATATTAAGGTCATGGCATATTAAATCA 157421 28 100.0 32 ............................ ATTGGATTCATTGTAAGCATTCACGTTACAGC 157361 28 100.0 32 ............................ AAGTTGTTTGTCTTCATATAACGAGAAAGAGC 157301 28 100.0 35 ............................ ACCTTGGTAAAGTGATGATCACGCTTGCGCCTGAG 157238 28 100.0 32 ............................ TCATGCGTTAGATGCGATTGAAAATGTTAAAG 157178 28 100.0 32 ............................ ATGGTGCGAACGAATGGGTCTTGCAGTCTAAA 157118 28 100.0 32 ............................ GTCTTTAAATACCCAACGCGTGTCAATGATTC 157058 28 100.0 32 ............................ CCACACTTACATTCATGCTGTTACTTGCTTGC 156998 28 100.0 32 ............................ TTATGTAGTCGCATTGCTTCTAAGTGAGATAA 156938 28 100.0 32 ............................ TTCTTGTCGAGCTCGTCTAGCACTTTTTTAAA 156878 28 96.4 32 ....................C....... AGTATCAAATAAAACAATGCAGTTTCTAAATG 156818 28 92.9 32 .............C......C....... AAATACTCAAGACGTATGCCGCTATGGTTTAA 156758 28 96.4 0 ....................C....... | ========== ====== ====== ====== ============================ =================================== ================== 22 28 99.4 32 GTTCACTGCCGCATAGGCAGTTTAGAAA # Left flank : TGATTACAAGCATTATGACAGTTTTAACAGGTTGTGCTTCTGTTGAGCAAGATACCGTGGTGCATGATTTTACTGCATATGGCAAGCTCAATGAGCCTTGGCGCATCGTGGTTAAACATGATGATCAGTTAGAGATTGAAGGGGTAATGGTTCGCGAGGGCACATTGAAAGTGACGCGATCGGCATATGCAAAAGGTGTTGAATTCTCAGGGGATTATGATGGGCAGCCATTGACATTAAACATCCGCTCATTGAAGTGTAAAGACAGCAATGGCGATGAAACAGATTTCACTGCCACGTTCTACTATGGCAAACGCACTTATAAAGGTTGTGCGGTTGCAGGTGCGATTGAGCATGCGGACACTTAAGACCTTTATGGTTTGATCTTTAAAAATTTGGATAAATATCAGTAAATTACATGTCATTGGAAAAGGATTGGTTTTATGGCTATAAACTGCCGAAATCATGATGTTTCCAATGGCTCTGTAATATTTTTAATT # Right flank : GACCGGAGCTGTGCCATCGTAACGGGATTATGAACAGACAGTAAAATTAATGCTTTAAGTTACTCACCATAATACGCCCAAAGCAGGATAGGTTTTTTCTTGGTTTGTAAAAGCTTGTCCACTTTGCGCATTGTGTCATCATTCACAACCGGGCAGCCTTGACTGAAACCTAAAGGCAAATAGTTTGGGAAAGTTTCTTCATTCGGAATCATCTTAAAAGAGTGGAGCACAATGTAACGCTTAAAGGCATTGCTGTTACTCGCCTCTAGTCCATGGAGTTTGTAGTGAATGCCAATTCCCCATTTGCTCGGTGCGCGGATGCCCACACGGTATTTACCGAGAGAAGATGCATAGCTATTCGGTTGATTGCTAAAGACAATGTTTTGATTATCACTCTCAAAGCCCACATTGCCATAACCATGGGCGACAATGCTTTTGATCTGCGGTGATTGTGTTTTAAAATTCCACACAAAAAAGCGATCTTTACCAGAATGGCGCGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //