Array 1 203687-208219 **** Predicted by CRISPRDetect 2.4 *** >NZ_VELY01000008.1 Brevibacterium casei strain DE0115 NODE_8_length_209057_cov_30.828720, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 203687 29 100.0 32 ............................. GCCCCTGCGGCGGCCCTGGACGATGAGAGCGA 203748 29 100.0 32 ............................. TCGGCACACGGTCGGGCATCGCACCTGGTCAG 203809 29 100.0 32 ............................. CCCTTCGCGGCACCGTCGACCGACCGGCCACG 203870 29 100.0 32 ............................. GAATCCGCTGCAGAAGCCGCGCTAACACTGCG 203931 29 96.6 32 ............................C CGCTCGATGCAGTGAAAGAGCAGTGGCCGACG 203992 29 96.6 32 ............................C CCGCTCTTGTCTGTGGAGCGACCATCAGGGCG 204053 29 100.0 32 ............................. CGTTCGCCACCGGTGGGGTGTATGGGCCGGTG 204114 29 100.0 32 ............................. TCGATCGGGAAAGATCAGATCGCCCGCACCCG 204175 29 96.6 32 ............................C ACCGCCGAATGTGGCCATGGCAGTGCCAACCG 204236 29 100.0 32 ............................. ATGGGCGGCGACATGCGCCTCTACGTCGTCGC 204297 29 96.6 32 ............................C TCGTCGAGGAGGGCACGCACGAGCTTGAGGTA 204358 29 100.0 32 ............................. TTCCGTCTGAGCCGTCTCCAACGCCTGCTTCG 204419 29 96.6 32 ............................C AGCTCAGTGTCCTCAACGTCAAGGTCGCGGGG 204480 29 96.6 32 ............................C CCGAGCCAGGCGCCGAGCAGCGGCAGGCCTAT 204541 29 100.0 32 ............................. GCCGTCAACGACATTGAACGCAACGTCAAGAT 204602 29 100.0 32 ............................. GTTCGACCCAGCCGACACTCCCGCCCGGTCGA 204663 29 100.0 32 ............................. ATCTCCCCCGAGGTCGCGCGCCTCAAAGACCC 204724 29 96.6 32 ............................C ATGCTCGACTTCATCGGCAAGGGCCACGGATA 204785 29 96.6 32 ............................T GCCCACTGACGCCATAGCGTTGGCCATGCCGA 204846 29 96.6 32 ............................C CTCTACCTCTCCGGGGGTGAGGCGATCATGCG 204907 29 96.6 32 ............................C ATGGTCAGGCCGTCATCGGCCCAGCGGCCGCG 204968 29 100.0 32 ............................. ACGTTGAGATAGCGCGTCATCAGCTCGGCGTG 205029 29 96.6 32 ............................C TACTCGCCAGTGACCACGACGATGAGGAGACC 205090 29 96.6 32 ............................A TGGGTGCAGCCGGTGGATGCGACGACCGCGTA 205151 29 100.0 32 ............................. GCCGTCCGTTCCCGGGTGTTCTGGATGTTCCT 205212 29 96.6 32 ............................C TCCCCGTTCGCGTGGGAAGTGAGAGTCTTGAA 205273 29 100.0 32 ............................. CTGGGACGTGAGGCCATCCTCAGGGAGATCAT 205334 29 96.6 32 ............................C CAGGACATGTCGTTCGACCCCGACAGGGTGAG 205395 29 96.6 32 ............................T CAGTGCGGGCATGGAAGGGCTGATCGCGCGAT 205456 29 96.6 32 ............................C GCGGACACGGTCATTGATCGGTGGTCGCGGAT 205517 29 100.0 32 ............................. AAGTGGTCCACCGCTGAGGGCGGCGCAGATAC 205578 29 100.0 32 ............................. CCGGAGGTCGCGAAAGCACTCGCCAAGTGCCT 205639 29 96.6 32 ............................C GGCACCGTCGTTGAGACATCGCCCGACATGAC 205700 29 96.6 32 ............................T TCCTTTGGTGAGTGGTGAGTGGTCATTGCGTG 205761 29 100.0 32 ............................. CCTGGGATGTATTCCCGAACGTGGATGGTGTC 205822 29 100.0 32 ............................. AAGCTCACGACCGCTGAGTCATACGAGTCGGA 205883 29 96.6 32 ............................C GTGAAGCCGATCACGTACTACAGCACCGCCGA 205944 29 100.0 32 ............................. CCCCGCAGCGCCGCCTGCGCCGTGTTTGTGGT 206005 29 100.0 32 ............................. GCCAGTGGTCCGATCCTCGTGCTCGACGGCAT 206066 29 100.0 32 ............................. GCACGGACTGAGGCACAATCGGGGCCGCATTG 206127 29 100.0 32 ............................. TTCCCCTCGGCGACGCTCAACTCCGCCTACCG 206188 29 96.6 32 ............................C ATGCCGGGGTACACCCTTCGCCATGTCAGCGG 206249 29 100.0 32 ............................. GGTCTCAGTCAACGCTCGCGCGGACCGTCTCA 206310 29 100.0 32 ............................. GTGGTGAGGCTTGTGGTGCGAGACGCACCAGG 206371 29 100.0 32 ............................. CGCAATGAGCGACAGACAGAGTTCGACTACAT 206432 29 96.6 32 ............................T GCCTATATAGGACACATTGAGAGAGTGGCGGC 206493 29 100.0 32 ............................. ATGATGACGACGAGGACGGGGATGATGAAGAG 206554 29 100.0 32 ............................. GGAGAGACCTCTCCGAGCTGGCCCTGAGGGTG 206615 29 96.6 32 ............................C CAGTGTTGCTGAGGTCGCCGCTAAGGCTGGTG 206676 29 100.0 32 ............................. GCACAGGAACTCAAGGGGATCAAGGACTCGGT 206737 29 96.6 32 ............................T CACCAGATGATCGAGGACCACTTCGAAGCCAT 206798 29 100.0 32 ............................. TCCGTCGGGAATGGGGGTCTCAAGCCATCCGT 206859 29 100.0 32 ............................. GAAACCAGCATCATGACCAGCACCGACCAGCC 206920 29 100.0 32 ............................. CAGGTCACGACGTACTCGATCAGATCAGGTTC 206981 29 100.0 32 ............................. CTCGGGGATATGCGGCGTGGCGCTGACACGAC 207042 29 100.0 32 ............................. AACGGCACGGTCGCGGGACCAGCGAACGAGGT 207103 29 96.6 32 ............................C ATGCACTACCTGCTCACGCCCGCCGACTGAGC 207164 29 96.6 32 ............................C GAATACGGGTACGCGCCGATCACGGTCACGAA 207225 29 96.6 32 ............................C TCACATGATTCTCACAAGAATGCCACTACGGC 207286 29 96.6 32 ............................C TCGTCGCAGAGGTAGTCGACGGTCCAGCCATC 207347 29 96.6 32 ............................C GTCGACTCCATCGCCTTCGCGAGGTTCGCGAT 207408 29 96.6 32 ............................C TCCTCTGGTGAGTGGTGAGTGGTGAGTGATCG 207469 29 96.6 32 ............................C ATGGCGGTCAGCGCGTGCCCTTTTTTGTGTCG 207530 29 96.6 32 ............................C TACTTCTCTGGCCTAGCCTTCGACGGGACGCA C [207545] 207592 29 100.0 32 ............................. GGATTGCGCGAAGCCCTTTCGGCTTCGTCCGT 207653 29 96.6 32 ............................C AGGTCAGCGAGCGTTGCCATGTCGCCGGTCCT 207714 29 100.0 32 ............................. GCCCTGCAGCGCCGAGTCGGTGCGAAGGCTGA 207775 29 96.6 32 ..A.......................... GTCGCCCTTGAACGTGGACCCGTAGAGGGTGA 207836 29 93.1 32 .......T....................C GTCATGGCGAGGGCCTCGCGGGCCTGGGTGAC 207897 29 96.6 32 ............................C TACAGTGCCGCCGACGTCTACGCGGCCACCTA 207958 29 96.6 32 ..A.......................... GCCTCGACGAAGGAACTGGTGAGGTTCGAAAC 208019 29 86.2 32 ...G.....A.G................C CAGCTCCTCACGGACGCTGAGGTGCGGTTGAT 208080 29 93.1 32 ........T...................T CTGGGCAGGTCGAGGGGGTACGGTGCGTCCTT 208141 29 79.3 21 ......G....G.T.......T.....GC TCGAAGCGCCTCCCGGCTCAA Deletion [208191] 208191 29 72.4 0 ...G.T....TG.A.T........C.T.. | ========== ====== ====== ====== ============================= ================================ ================== 75 29 97.4 32 GTGCTCCCCGCCCCCGCGGGGATGATCCG # Left flank : TCGTTCGCACTCGAGCTTCGAGACGATCATCGAATCGATCAGGGACCGACTCTTCACCCTGCCCGATCCCACCGTCGTCCTCACCGGCCACGGCGACTCGACGTCGATCGAGGCGGAGAAACCATCGCTCGAGGAATGGATCAAGCGCGGGCACTAAGGGTCGAATCTGGGCCGAGGTCTCTGGATTGAGGGCTCGAGCTCCAGCGAACTGGGCACTCTAGAAACTAATACTTTGGCGCCCCGGAGACGTTAGTCGTCGTCTTCCCGGGTGCGCCGCGGTGCTTGCAGACAGTCGGCTGACGATTTGCTGTCGTCTCGCGGGATCTGCAGGGAGCGCGGCTTCGGCTTTGGGGGTGAATCTTCGATGGCGCACCCTTTGTTGTTTGCCTGAATCACGCCGCAGGGGGGTGCCGATCGTGGCCACACCTCCATACGCGGTATGCAATGCGAAACTCATTGCAGATATCCCGCACGTGTTAGATTCTTGCTGATCAGCAAGT # Right flank : GGTGTCTCCGGTGGCATATCGGCCGATGTGCACGTGCTCCCTTGCGATTCGCAGCGTAGTTCTCATGTCGAAGAGAGAGGCCGATTAACTGCCGTTGGCGAGCGCCCGTTACAAGCATTGTCAAGCAGCCGCCGGGGGTCATTGCTTCGTAGAAGATTACGCAATTGACCACCGCCAACCGAACAATCGGGGCGCCAGGCCAATGCATGAGTTTACGGTGTCGCGATCCGGGGCCCTCGGTCCCAGGGGAGGATTGAAACCCCGCTTAGGCAGGGAACAACGCGTCGGCTTACCGATATTTCGGATCATCCCAGCAACAGTGACCGGGAACTGCACCTCCGCTACAGGAATTGTCGTACGAACCGCAGTCTACGTGAATGGTCAACATTCAGGAGTAGTCTTGCCAGCACTTCCTTGACTTCGGTCCGGCCCAGTGCGACTATTCTCATAGTCCTTCGATGCAGACGCTTACCGTTATCTGTTCTGTCATCAACAAGCCG # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.65, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCCCCCGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-29] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //