Array 1 2136-2304 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXXB01000095.1 Staphylococcus schleiferi subsp. schleiferi strain NCTC 12218 NCTC12218_c96, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2136 36 100.0 30 .................................... TATTGACTTTTTACAACTTGAGATAGGTTT 2202 36 100.0 30 .................................... ACGGTGTCATGCAATTAGCAGCTGCATCGG 2268 35 80.6 0 .........................T..GTCA.C.- | CT [2294] Deletion [2303] ========== ====== ====== ====== ==================================== ============================== ================== 3 36 93.5 30 GTTTTAGTACTCTGTAATTTTAGGTATAAATGATAC # Left flank : TTATATTAGAAATGAAAAGCAATTATTGACAGTAGATTTTATTAATCATTTAGTATGGGATGCGCCACTTAATTTTGAAAAACTTGAGATTAAACGTAGCTTAGAAAAAATTATTAAATTATATCAAGAGGTCATTGAATTAACACCGAAGATTTCAAATTATAATTTAGCTGATATCATTGTCTTCGAACCAATAGATATCTATGTTGTCGTAAAATACCTTAAACATGCAAAACAAGATTTTGTATTGGATATCCATTATGACAATCTACCGATTGCTGTAGCGAAATATATAAAAATGTATGATTTGAAGTTTAATAAATAAATCTAAGAGCTTATTATAGGAAAAGGCTCTAGCGCTTGGTCAATTGACTTGTAATTTAATCGATTTATCAAGCGCTGCTAAATTATTTTAGTAGAAATTGTGCGAGATTTTAAAAATGTCTAACATTAAATTTGGTTATAATAATCATAAAAATAAGCTATAATTATAGCTAGAG # Right flank : ATCGGTTGGCGAGACGATAACGCATTAAGCAACGTTATTTTGTTGTTTAATGCGTTTTTTATATTCACTTAGAAATACCTTGGAAATGATTAAGATTCTATTCCTAAAATTCCAGAAATTTCTATAGCCATAAGAAACCCGTTTAATCAGTTTTATTTTATTATTAATGCCCTCAATTGGCCTTCGTATAATAATGCCTTTACGTTTTTATGTACATGTAATCCTAGATTTTGAGTGATTTTTAAATTTTTGACTTTAATTCCAAGCATTTCTGATATATCATTATACATAGGCACAATATCTCCTTAATGGTTTGTTTAGGCACTTACAATTATAGAGATATTTGTGCTTTTTTGATATCAAAAATTAAAATAACGGTCAGTGAATATTTCACCAACCGTTAAAAAATATACAACCTTATTTAATGCACTTGCATATTGGATACACTAAAATTCAGAATTTAATTTTTATGTTCAATATTGTTAATCACTTGTTCATAT # Questionable array : NO Score: 5.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAATGATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //