Array 1 665609-662944 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050995.1 Chryseobacterium gallinarum strain FDAARGOS_636 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 665608 47 95.7 30 ..........A.............C...................... ATATTTGTGGAGAATACGGGATTCGAACCT 665531 47 100.0 30 ............................................... TAATTCTGAATTATGAACTCGGAGCATGAA 665454 47 100.0 30 ............................................... ATTGTGAATGTCCTCCTTGTATTGGTTATA 665377 47 100.0 30 ............................................... TCTACAGGCGTACTTTTCGCAATGTTATCA 665300 47 100.0 30 ............................................... CTGAAGACCAGTTTATCAACAAAGCAAATT 665223 47 100.0 30 ............................................... GTCGGCGCAGTCCACCCGAAGTCAATCGCA 665146 47 100.0 30 ............................................... GGAGAAGACATATTATTGTTGATTGCATCT 665069 47 100.0 30 ............................................... TATCGCCTTCTACTGGCGGGTACCAGTTGG 664992 47 100.0 30 ............................................... TTCAAGATCAAATTGGACTTGATTAGGTTG 664915 47 100.0 30 ............................................... CAATACTTGCTTTACCTACCTGATCAACAT 664838 47 100.0 30 ............................................... AGGATACGATTAGGTACAAAGAAAAAGTGT 664761 47 100.0 30 ............................................... ATCGACACTTTTGAAAAAATTGACATAATT 664684 47 100.0 30 ............................................... ATCCCTTTCCATACTCCATTTCGTTTATGT 664607 47 100.0 30 ............................................... GAATCAAATCGATGGGAGAAGACGCCATGA 664530 47 100.0 30 ............................................... GAATCAAATCGATGGGAGAAGACGCCATGA 664453 47 100.0 30 ............................................... AGTCGATAAACTCAATAAAACAGGTATTTT 664376 47 100.0 30 ............................................... CGATCTCAAGGGGTATCCATTTAATGGCAG 664299 47 100.0 30 ............................................... GTAAACGGTGTAGAGGATAGCGAAAACGCT 664222 47 100.0 30 ............................................... ACTGATTTTAAAAAACAATGGTATGAATCA 664145 47 100.0 30 ............................................... AAGGCACATCGTAATATCAAAGAGCTTTAT 664068 47 100.0 30 ............................................... TCATTACAGATATGGAAGGCTTAGGACTTA 663991 47 100.0 30 ............................................... TAATACGCCGCTGGGTCTTCCGTCAAAATA 663914 47 100.0 30 ............................................... AATTTGGATGTGCAAGAGGAAGGACCGGCA 663837 47 100.0 30 ............................................... CATGTATGGTGAAGGAATTTCTAAAGCTGG 663760 47 100.0 30 ............................................... ATTAACCAATCTGCTCCTTCTGCTTGATTT 663683 47 100.0 30 ............................................... AATAGCGTAGATGATAAGCTACAAATCGCA 663606 47 100.0 30 ............................................... GAGGAAATATGTGAAAGGAGACAAGGTTCT 663529 47 100.0 30 ............................................... TGGAATCTCTCCGATCAGTTGTAGCGCCTT 663452 47 100.0 30 ............................................... GAATTAATCTGAGTTTGATTGTAATAATTC 663375 47 100.0 30 ............................................... TGGGGCACGGCACAGGCATTTCCATATTTA 663298 47 100.0 30 ............................................... TTTGCAGGAAGTTTATATTAATTCTCATTA 663221 47 100.0 30 ............................................... TTTCGGTGAGTTCTGTTCGTTCTTATATGA 663144 47 100.0 30 ............................................... AATCCTTTACCCAAAGTGACCATGCTCCAT 663067 47 100.0 30 ............................................... TAACCCCTGCTTTTTTGAATTGAAAATATG 662990 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 35 47 99.9 30 GTTGTGAATTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC # Left flank : ATCTTACGAGAGGACAACATATCTTCTATGTAAAAGATCAATACAACTGCGTTCCCGTAGCAGCAGAAATTACAGTTCCTAATCTGATAAATGCCATTACTCCAAACGAAGACGGTAAAAATGATAATATTGATTATTCAGCCCTGGCTTACAAGAGAAACCTTATTTTTGAAGTTTATGACCGGTATGGAAATAAGCTTTATGAGGCCGGTAAAATAAGAAACTTCAAATGGGACGGCACCGCATTTGGCAAGAAGCTTCCTACTGCCACCTATTGGTACACAATCTCATGGAATGAAAATAACAATGCCAACACCTCAGTCAGGTACAACGGCTGGGTACTTGTTAAAAACAGAGAATAATTCGAATGTATCAGCAAGAGTTAAGTCCCTTGCTTTGAGCTGGGGACTTTATTGGGTTGAAATTCACTCTGCATCCGGAAAATTTACTATCTTCGTGATTGTCACAGCAGAAATCACTTTTTGTCAAAAGAACAGTCG # Right flank : CTCAAAATTTAATCCGTTGAATTTCAACGGATTTATTATTTATTTAGAATTAAAAAATTAGAATAATTCAAGTTGCTGAAATGCTGGAGGAGGTTCTTCTTTATTCCTGGCAAAGAAAATCTCAATATCTCCGAATTGCTTATCTGTAATACACATAATAGCCACTTTCCCTGCCTTCGGTAGCATAAATTTCACCCTTTTAATATGAACTTCAGCATTTTCACGACTTGGACAATGGCGGACATACATAGAAAATTGAAAAAGCGTAAATCCATCATCTATCAACCCCTTACGAAACCGATTGGCATCTCTCATATTTGTTTTTGTTTCTGTCGGGAGATCATATAATACTAAAACCCACATAATTCTGTAAGCATTAAACCTTTCGGAATTCATATCAGTTCAGGATAAGAAATCAGTCTTTTTTCACCTGTATAACATTTGTATAGTGAAATTGTTGTTGTTTTTACTGCCACTAGCAAAGGTCTTACTTTGCCATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //