Array 1 548-1 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CNAX01000090.1 Mycobacterium tuberculosis strain BIR-09, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                         	Insertion/Deletion
==========	======	======	======	=====================================	========================================	==================
       547	    37	 100.0	    35	.....................................	TGCCCCGGCGTTTAGCGATCACAACACCAACTAAA     	
       475	    37	 100.0	    37	.....................................	TTTATCACTCCCGACCAAATAGGTATCGGCGTGTTCA   	
       401	    37	 100.0	    36	.....................................	TCTTGACGATGCGGTTGCCCCGCGCCCTTTTCCAGA    	
       328	    37	  97.3	    33	..................................C..	TCGCAAGCGCCGTGCTTCCAGTGATCGCCTTCA       	
       258	    37	 100.0	    37	.....................................	TTAAAACCGTGTTGCACTGCAACCCGGAATTCTTGCA   	
       184	    37	 100.0	    40	.....................................	CATAGAGGGTCGCCGGCTCTGGATCACGCTCCCCTAGTCG	
       107	    37	 100.0	    33	.....................................	TCGCAAGCGCCGTGCTTCCAGTGATCGCCTTCT       	
        37	    37	  97.3	     0	A....................................	|                                       	
==========	======	======	======	=====================================	========================================	==================
         8	    37	  99.3	    36	TGTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC	                                        	       

# Left flank :   TTTCAGTACGCCCTCGACTTGCAACTGCAAAGCCTCGTGCGTGTTATCGAAGCCGGGCACCCGGCGCGGCTCGTCGATATCGATATCACCTCCGAGCCATCCGGAGCCTAAATGCCCACTCGCAGCCGTGAGGAGTACTTCAATCTCCCGCTCAAAGTGGACGAGTCCAGCGGCACTATAGGCAAGATGTTCGTCCTCGTAATATACGACATCAGCGACAACCGGCGGCGGGCTTCACTTGCGAAGATCCTGGCCGGGTTTGGCTATCGCGTCCAAGAGTCCGCATTCGAAGCGATGCTGACGAAGGGCCAGCTCGCGAAACTAGTTGCACGTATCGACCGCTTCGCCATCGACTGCGACAACATCCGGATCTATAAGATAAGAGGTGTTGCGGCAGTTACGTTCTACGGAAGGGGACGGCTTGTCAGCGCAGAGGAGTTTGTGTTCTTTTGACATCATCAGCAGGCATTGTTACCACACGCTGGACGAATTGTCCATAA
# Right flank :  C

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TGTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,12] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.40,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,1.15   Confidence: HIGH] 

# Array family : NA
//