Array 1 74992-71544 **** Predicted by CRISPRDetect 2.4 *** >NZ_RRYJ01000012.1 Pseudoxanthomonas sp. SGT-18 12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 74991 28 100.0 32 ............................ AGCTCGGCCAGGTCGTCGCGCCAGCGCTGCTC 74931 28 100.0 32 ............................ ACGCCGTCTCTGCGTCAGTCCAGACGCAGAAG 74871 28 100.0 32 ............................ ACCCCAGCCGAGTCTCGCAGGCCACGCCACAC 74811 28 100.0 32 ............................ TCCCGGACGGTATGCTCCGGCAGGCGGACGCC 74751 28 100.0 32 ............................ ATGGCCAGCCACGACGGCGTCAACTTCGAGGT 74691 28 100.0 32 ............................ CGCAGTCCAGAGCGGCCGCTCGACCAGGAGGC 74631 28 100.0 32 ............................ TGCGCACCAGCAACCAGGAGGCGGCGGCATGA 74571 28 100.0 32 ............................ TCCCGCGCCGATTCGAGGGCGGCGGCCAGCGC 74511 28 100.0 32 ............................ GGATTTTGTCGTCCTGCACGTCGACGTCGCAG 74451 28 100.0 32 ............................ TGCTACAGGCTGGATCAGGCGGGCGTTGCCGC 74391 28 100.0 32 ............................ TTGCGTGATGCGCTGATTAAGGCGAGCAAGGG 74331 28 100.0 32 ............................ GACCGTGGTGACAGTAAATCACGACTGCGCTG 74271 28 100.0 32 ............................ CGAGCGCGCCCGTGGGGGTGGATGAAGTCCGC 74211 28 100.0 32 ............................ GGAGTACCGGCTCCACTTCTTCAGCTGGTGGG 74151 28 100.0 32 ............................ AGCGCCCCCTGGCCCTTGCCCTGCATGTAGGC 74091 28 100.0 33 ............................ GGCCTGACGCCGCGGTGATAGACGACGATCCGC 74030 28 100.0 32 ............................ CGCAGCGCCGAGCGGGGAGGCGGTGGCCTATC 73970 28 100.0 32 ............................ ACCACGACGGTGCCGTAGCTGTGCTGCTCGGA 73910 28 100.0 32 ............................ AGCCGAACTGGCGCAGGAAACTCTCCGGACTT 73850 28 100.0 32 ............................ GACTGGCTCCGGGGCCTGCTGCATCGCGCCTC 73790 28 100.0 32 ............................ CTTCTTGGGGTCGCGCCGGATGATGTCGGCGG 73730 28 100.0 32 ............................ TTCCGCCTTTCTTCCCGCTCCGTATCCAAGGC 73670 28 100.0 32 ............................ TGGTCGTGCAGGACCGAGGACGCAACGCCGAT 73610 28 100.0 33 ............................ AACACGCCCTCGCGGGCGGTGCCCGGCACCTCC 73549 28 100.0 32 ............................ GTCCAGCGCGGCCAGCTGCAGCAGCGCCGCCG 73489 28 100.0 32 ............................ AGGTACAGGTCGGCGATGGTGAGGCCGCCGTC 73429 28 100.0 32 ............................ ACGAAGCGCACGTCCTCACGCGACTTGTCGTA 73369 28 100.0 32 ............................ TGCTCGAAATAGTCCCGGTCCCGCTGCTCGAT 73309 28 100.0 32 ............................ CTGTACTGCCGTGTCTCCCTGTCCCAGTTCAA 73249 28 100.0 32 ............................ ACCCGCCCGCCGGTCCAGCTGCGGAGGATACC 73189 28 100.0 32 ............................ CTGAGGGGCGTGTCGGGGAGCTACTACAGCAC 73129 28 100.0 32 ............................ CGCGGCGCGGAACCGGATTTTGTCGTCTTGCA 73069 28 100.0 32 ............................ TCCGTTTGCCGCTGCGATGGCGGCGTCGATCA 73009 28 100.0 32 ............................ TCGGCGCGGTGGATGGCCACATACGGCAGCTC 72949 28 100.0 32 ............................ GCGCAGCATCGTGTCGACCGGATCCGTCTTCC 72889 28 100.0 32 ............................ ATCGGCCGGGTCAGCAACGCGTTCGCCTCCGC 72829 28 100.0 32 ............................ AAAGCGGACGCGTGCGCCATCTGGATCGTGCA 72769 28 100.0 32 ............................ AGCAGCAGCGTACGCGGCGTGCGGATCGGCTC 72709 28 100.0 32 ............................ AGCGAGGCATCTCGTATATCCAACGGTTCTTC 72649 28 100.0 32 ............................ TACCGCAAGCCCGATTGTGTCTAGGTTGTCTT 72589 28 100.0 32 ............................ CAGATGTCCCGGCCGTTCGTGCGCATCCCGCA 72529 28 100.0 31 ............................ GCTCCCCTCGGGGCGCACCCAGCGGCAGCCG 72470 28 100.0 32 ............................ ATGTGCAGCCAGACGAAGTCAGCCAGGGAGCC 72410 28 100.0 32 ............................ AACAACACAGACCCGGTGCGGGCGCTGATCGG 72350 28 100.0 32 ............................ TTGCAAAGCGCATCGGTGTAGTTATTCCACGA 72290 28 100.0 32 ............................ TCGATCCGCACGCCGTACTGGCCGCGCCGGCA 72230 28 100.0 32 ............................ TGCGGGATGCCGTCCACGAACGCCTCCAGCAG 72170 28 100.0 32 ............................ ATGTCGGCGGCCTTGACCTTGCGAGCGTCGCT 72110 28 100.0 32 ............................ TACGCCAGCACCAACGTCGAGCATCACACGGC 72050 28 100.0 32 ............................ AAAACGGTAGGCGTGTCAATACCCCTGCGCGA 71990 28 100.0 32 ............................ TCGACCGGATCGGGAGCAAGGCCGGCGATGTG 71930 28 100.0 32 ............................ TCCGCGACCAGCAGACGACGCGGGTGATCCCC 71870 28 100.0 32 ............................ GAGCGCAGTAACGAGAGCTGAGGCATGGGCTT 71810 28 100.0 32 ............................ AGTGGCATGTGAGTAACTCCCAACCACTCCAG 71750 28 100.0 32 ............................ CAGTTGACCGAGATGTCGACGTCCCAGATGCC 71690 28 100.0 32 ............................ GGCGTGGAGAGGCATTCGCTGCACGCTTGAAA 71630 28 96.4 32 .................A.......... AACACCACAGACCCGGTGCGTGCACTTGTTGA 71570 27 75.0 0 ...........A..-.......A.TGCG | ========== ====== ====== ====== ============================ ================================= ================== 58 28 99.5 32 GTTCGCTGCCGCGTAGGCAGCTCAGAAA # Left flank : GCGGGACTTGCTGTCTTCCGACTGGCTACGTGGCCTGCGTGACCATGTCCGCATGGGCAGCGTCCTACCCGTGCCTGCGGATGCGATGCATCGCAATGTCCGACGTCGGCAGTTCAAGACCAGCGTTGAACGCCTACGGCGGCGACGCATGCGACGGAAGGGCGAAACAGCGGAGGAGGCCGCGCGCGCCATCCCTGACTCCGCGGCCGAAAACCCGAACTTGCCCTACCTGCATCTACGTAGCCTCAGCAGCGGGCAGGCCTTCTGCCTGTTCATCGCCATGGGGACGTTGCAACTGGCTCCGGTTCCAGGCCGTTTCAACAGCTACGGTCTTGGTGAAGCCGGCGCCACCATCCCATGGTTCTGACCCCCTTTTTTTGGGGCAAATTCAGGCTCTTTGAAAAATCAACAAGTTGCGAACCCCCTGAAGAAAAGGGGTTGAGCTCCGGAATGTGGCCTTGGCGCCCGCCACGCAAGGGCCACACCCGGAGCTGCGTCTT # Right flank : GTGTTCGAAGGAGATCATCGGCTGCGGACTCGCTGGCAAGCAATGCCGTGCCAGCCGGAGGCGAGTCGCCAGCAGGGAGGCCCAGGTCTTCTGTCGGGGCAAATTGACGCGCCGATCCTCCATTCCTATCCGTATGGTGCATGGGCACAACTCCCAGGCAGGTCCACGGCTCGCGCCCCATGCTCCCCCGCCAGCCGTCCAACGATTTGGCTGGCCGCGCTGGTGACGCCAAGGCTAGCCAGCCCGACCTCCTGGTCGAATCCGGCCTTCTTGCTGGATGGCCGGGCACTTACCCACGTGCGTGCGCACATCTGCCGGCCCAACGGCTACGATTGGGCGCTTCGACGCTGATTGGGAGTCCACATGCCCCGACTGCTCCGCCGCCTTGCCGTCCTGACCGCGCTGCTGCTGGGCAGCGGCCTTGCCGCCGCCAGCGACCACTGGGTCGAGCTGGCCGGCGAGCGCTTCCAGGTCGAGATCGCCGCCACCGAGGCCCAGCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //