Array 1 140904-142326 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCLE01000030.1 Streptococcus orisasini strain SH06, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 140904 36 100.0 30 .................................... ATGAGATTTACAGATCCTGATAGTGGTAAA 140970 36 100.0 30 .................................... AAATGATAAACCATTCAATCGCTATCGCCG 141036 36 100.0 30 .................................... GAAGTAAATATCATCTAAAGCAGTAGGATT 141102 36 100.0 30 .................................... TTTAGCAGAAGTTCTAAGCGTTGGCTCCCT 141168 36 100.0 30 .................................... CAGCTCTTGCTGTGCTTGCTCCGGTTGCTA 141234 36 100.0 30 .................................... CAGTGCCTGTTGCAGCGAGCACAGATGAAA 141300 36 100.0 30 .................................... AGCTTGTTCTTTACCAGCTTGCAAGTCGAA 141366 36 100.0 30 .................................... TTAATACTATGTCTAGATTACAACGTGAAA 141432 36 100.0 30 .................................... ATGGCAAGAGTTTATGCTTTCGCAATGTTT 141498 36 100.0 30 .................................... GCTTGACCAAGGCTTGCCGTTCTCGTCCAA 141564 36 100.0 31 .................................... CATCGGTGTTAATGAGATTGCAAGCAGAAAA 141631 36 100.0 30 .................................... TTTAAAATTATACAGAGGAAAAAAGCTGGA 141697 36 100.0 30 .................................... AGGATCTCCCGGATATATTCCGCCGCTTCC 141763 36 100.0 30 .................................... GACGGCGCTCAGCGGGGCGAGCAAGGCGCA 141829 36 100.0 30 .................................... TTTGGTGTATAGCACGTTTTCAAATGCTGT 141895 36 100.0 30 .................................... ACTAATGCTTAATTCCCTTTACGGTAAATT 141961 36 100.0 30 .................................... CCTCGACATATAATTTGTGAATTGTGAATT 142027 36 100.0 30 .................................... TCTAAGCGTTAATAAATACAGTCATAAAGT 142093 36 100.0 30 .................................... CAGCCATTTGATCGTCCGATTGATATTATA 142159 36 100.0 30 .................................... TTCTAATCTAGATTTAATAAAACCGGGAAT 142225 36 97.2 30 ..........................A......... CTTAGATGTATACACTAAGCTTATTGAATT 142291 36 86.1 0 .............................G.TGC.G | ========== ====== ====== ====== ==================================== =============================== ================== 22 36 99.2 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AGGAAGAAGAAGGGTACTGGGTTGAATTTCCTGAATTTGGCGGAGGTACGCAAGGGAAAGACTTGGAAGAAGCCATGAAACATGCGCGTCAAATGTTAGAGAGTGTACTGGCATCTTATCTGGATGAGGGAATGCAACTGCCTGCTCCAAGCGATATTCGTAAACTATCTGCAGAGGATGGTTTTGTTAGCCTGATTCAGGCTGATCCCAGTCCCTACCTTAGAAATACTAAAGCTATCCGAAAGAATGTAACGGTTCCTGAATGGCTGGTGCGATTGGCAGATCGCAATCAAGTGAATTATTCCGAAGTGCTGACTAAGGCTTTAGAAAAGAAGCTACAATTGTGAATTAATTGAAAGTGCTAGAAAGATTGATTTCTAGCGCTTTTTGAGGTATAATATAGATAATTAAATGTTTAAAAAGGAATCATTTTGAAGCTGAAATCTGGCTGAGATGAATGGCGCGATTACGAAATTTCGAGACGAAAATTGGTCCACGAG # Right flank : GTTAAATTACGAACTAGTTTGAAATTGATTTATCTGTTTGTGTTTTTTAAGTTAAGTTTGTAGTGGGCGAAAGAGATAAAGGTGACGGGGAACTGAGGATCCTTTTTTTGTTAGTAAAAAAGCTGCAGTGAAATCGCTGCAGCTTGAGTTATTTTGAGTCTTGGTTTGCTTAAGTAATAACAGTGCCGATGATTTTAATATCATCATCTTCTTGCAGGATGATATCATCGTAGCGGGAGTTGAGCGAAATCAATCTGATTTCTTGCTCTTTTTTGTATAATTTTTTAAGGTAGGCTTTATTGTTCACGATGACAATGATAAACTGACCATGATAAATTTCGGGAGTTTTCTTGACAAAAATGACATCACCGTTATAAAACAAGGGTTCCATACTGTTGCCACTTACTTTAAGAGCAATATCATGCTTGGGAATAGGCGCCGGATATTGGATGGTCTCTTGCTTTTCATGATCAACCCAAATGCCAGTACCAGCCGATACT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //