Array 1 130137-131148 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHETQ010000005.1 Enterobacter chengduensis strain 120062 contig00005, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================================================ ================== 130137 28 100.0 32 ............................ AGGAAGGGGAATTGACCACGGTCAAAGAGGTA 130197 28 100.0 32 ............................ TTGACTTTAATCATTCTGCTTTCCGTGACGTC 130257 28 100.0 32 ............................ GCCAGCAGAATAAGGTTCAGACTCTAAATAAG 130317 28 100.0 32 ............................ CTGCCGGGGGCTGCTCTGGCGCCTGCGGCGCC 130377 28 100.0 32 ............................ AACAAGGTATTCCGCGGATGTTCTCAAGACAA 130437 28 100.0 33 ............................ TCTGCTGGCTGGCTAACAACCTGCATCATTGCC 130498 28 100.0 32 ............................ TCTTCATTTGGTCATAACCTCTTTTTTTAGTT 130558 28 100.0 32 ............................ TGGCCGCCGTCGCTAAGCAGCACGCTATCTCT 130618 28 100.0 32 ............................ GACCGGCTCCGTCGTGGACTGGGCGAAATGGT 130678 28 100.0 33 ............................ CTGAAGGTATGGGAGAAGAACGGTTATCGCCGC 130739 28 100.0 33 ............................ GGATTGGTCGGCACTTTCGGCGCAAACTGTGAT 130800 28 100.0 33 ............................ TGTCCAGCTCCAGTTCTCCCAGGATGGACTTGA 130861 28 100.0 32 ............................ CAGCGCGGTGCCGTACCACGTCAGCCGCAGCA 130921 28 100.0 32 ............................ GTACGAGACTGGTGGGCCTTCGCTGAGAAATT 130981 28 82.1 112 .....................AATC.C. CCTGGTTATGTCAAACACTGTGCCGCCTGATTATAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAAATAGCCAACATGGGGAAAGTAGGAACAGAGTCAATTAAGTTTT 131121 28 82.1 0 .....................AATC.C. | ========== ====== ====== ====== ============================ ================================================================================================================ ================== 16 28 97.8 38 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CACGGTTTGCACAAGCTTTTTGGCGGCGTGGGCTTTATTAGCGGCATGCTGGTGGAAAAAGGATTGCCGGGATTTATCGCCTACGGCGTGTTGGTTGGTGAAGTGGTTGCGCCGATCCTGATTATTATCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATTGTGGCGTGGCTGATGGTGGGAATGGGTGAAACGCTCGCCCTCGATAAGGTAGGTGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCGGTGGCGTTTTTAGGGGCAGGGCGTTTTGCGCTGGGGAAAGACCCGGCGTGGCGTTGAGGTTTGGGCTATGGCATGAAGGAAGGGGTCTACGGACCCTTTTTTATTGGTGATTTTTAACTCATTGATTTTATTGGGCTGAAATATATGCGAAGAAAAAGGGGTTGAGACGATTTTTTAGGTAATTTCTTTATCTGACAAGGTGATAGGTGTAGATTGTTCCA # Right flank : ACCTGGTTCTGTCAAACACTGCGCCCCCTGATTATAAACCCGGTGGCGCTGACGCTTACCGGGCCTACGAAGAGCCAACATGGGGAAAGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAACGGCGGCACCGCGTCAGATTATGCGAGGACCAAATCCCCCTGCGGATGGCACGAGCACGCCAGCACGTAACCCTCGGCAATTTCCGCGTCCGACAGCGTCATGGTGCTGGTGACGGTATACTCCCCGGAAACTACCTTCGTCTTACAGCAGCCGCACACGCCGGCGCGGCAGGCGGCCACGACAGGCACCTTGTTGCTTTCCAGCGCCTCCAGCAGCGTGGTTCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGTAGCTTAGTGAACTGAATCCCGCTGGTTGCCGCCTCCGCCACGGGCGTGAAGAACAGCTCCTTGAAGAAGCGGGTCACGCCAAGCGCTTTCACTTCTTTCTCTACGCTGTCCATGTACGGC # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.45, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 147999-149047 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHETQ010000005.1 Enterobacter chengduensis strain 120062 contig00005, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 147999 28 100.0 33 ............................ CTGGGTTAAACTCCATGCCTCGCTTCTCTACGT 148060 28 100.0 32 ............................ TGAACTTCTTTACCGGCTATGATGCTGCCAGC 148120 28 100.0 32 ............................ GTAACCGGGATTAAAACGTCGCCGACCAGCTT 148180 28 100.0 32 ............................ CCAGGCTGATACTGCGTTACCAGTGCCGGACA 148240 28 100.0 32 ............................ GATACACCCAGGCATGGGGTTTCTATCGTGGT 148300 28 100.0 32 ............................ ACAACCATTTTTGATAATTCATTTTCTACCTC 148360 28 100.0 31 ............................ AAAAGCAAGCGGTGACGCGCAGAGCCAGGAG 148419 28 100.0 32 ............................ ATCACCGCAACAGCGAGAACGGCAAGTTAGCA 148479 28 100.0 32 ............................ TACTCGCTCAAGTTGTTTCGTTGATACGTGGT 148539 28 100.0 33 ............................ CCTGAACCAGTCAGCGCCGCTGTATGCCCCGAA 148600 28 100.0 33 ............................ AGTACAATACGGGGCCTGGCCAACACCGGCGAT 148661 28 100.0 32 ............................ ATTCGAATCTCTGACTACAAGCGAAACATTGA 148721 28 100.0 31 ............................ TCGCACCACAACCCAATACGAGCCATAGCCT 148780 28 100.0 32 ............................ TGTCAAAACTCCAGTTTGAAACCAACGACAAG 148840 28 100.0 32 ............................ TGACCAGGCAGCTCGCCGCGCTGTCAGCTGAA 148900 28 92.9 32 ...T.............T.......... AATAACTGCTGCGCTCGATCGGCTGGTGGGTA 148960 28 100.0 32 ............................ ATCGAAACGAAACATCGACAACTGAGCGAAGT 149020 28 67.9 0 ...........C......T..CCCTCTC | ========== ====== ====== ====== ============================ ================================= ================== 18 28 97.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCCCAAACGCATCCCGTATGCCGCTGTCTTGGAGCCTGGCTGGAAGAGGTGAAATCCGGGCTTACAGAATCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGACGAAGTGGAACAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACCGAAACGAAATGCGACTACTGTCGGGCGTTAAACCATGTGCTGCTGGTGGCGAATTTTGACGGCGATATGTTGCCGCACATCACGGGGCTACTCCATGACATTACGCATTCTATGGCCGCAGACGTTGTTGCCCCTCGAAATGCAGAACCGGTAATTCACATTATTTCCTGAGTTCGAGCCCAGGCGTCGGGGGCATTTCTCTGACGCCGTTGCTGTAACCCTTTTTTTTGATGTATACGTAACGTATTGATTTATATGATGAGGATTTACGTGCCAGAAAAAAGGGTTTTATACGTGTAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTCGTTTCTTTCCA # Right flank : CAAACCAACCCACCGTATAATATTCACCAAACCAATTTAAAACCTAATCCCATCAAACCTGCACTCTCTATTTTCACAATAAATAAAAAACCCATTCATGCATGAATTATATTCTAACGAATATATTATTCGCAAAAATAATACTTCAGCTAAAAACATGATTTTCCACTTCATTATCACGGTGATTATTATTCATTTGATACCCGTCACATTTGTTTCCATCCGATGTTCGCTAACATATTGCGCATTCAACACCTTGAAATAAAAGCCCTTGCCATGTCCGTAAAGAGCATCACCCCTACAGACTTAAAAACCATTCTGCATTCAAAGCGTGCCAATATTTATTATCTGGAGAAATGTCGTGTTCAGGTGAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGACAAGAGTCGTTTTACTGGAATATTCCCATCGCGAATACGACTGCGGTGATGCTGGGAATGGGAACATCCGTTACGCAAATGGCAATGCGCGA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 158537-158920 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHETQ010000005.1 Enterobacter chengduensis strain 120062 contig00005, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 158537 28 100.0 32 ............................ GTCAGGGCATGGTGTGCAAACTAGCGGGGCGA 158597 28 100.0 32 ............................ TGCAATGCGACAGGGACCAGGAGAATATTCGG 158657 28 96.4 32 ...........A................ GCACGTTTGATGCCCGGACGCGACGCGCCCGC 158717 28 100.0 32 ............................ GACAGACGGGCGCGACTGCTTCGACTGATAGA 158777 28 92.9 30 ............G.........C..... AGGGAATGGTCACCATCACCACAGAAGAAA 158835 28 92.9 30 ..............CC............ ATAGAAAATAAGGTCTCTTCCCCTTACTTT C [158860] 158894 27 75.0 0 C.A.....T..A....A....C.-.... | ========== ====== ====== ====== ============================ ================================ ================== 7 28 93.9 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AAACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCTACGTTACGTTCATTAATTCCGGTGACGCGCAAAATGTCCGCTTTCGACATCGCCGTCCACTCATGGATATTGTCGAGCACGCTGACGGGTAACCCCTGATTGAGAAACTCAATCAGCCGCATACCCCTGTTTGCAGGTAAACCAGCGTACCGCCAAAGCGCGTTATCAGCAGGTTGTTGGGCGGGGATCCATGTTCTCATGTTACCTCCTGGTGAGTGTCATTTGTCATGGCTAAGTATAGTCATTTGTCAGGTGGAGTGGAATGGCGTTTTTTTATACTGGGTGGTTTAAGAGAAGATGGCGTTTGACCCTAATTTTTAGGGTGTTTGTAATGCATTGATATTAAATGGATATTTGAGAGGGTAAAAAAGAGGGTAAAAGAAGGGGTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGAAGATATTATTTCA # Right flank : ACGAACCGCCAAATAATTGTTCAAATAATCGACTGCACCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCATTTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACAGGATA # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //