Array 1 19485-19211 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKLL01000025.1 Streptomyces albidoflavus strain NBRC 100770 Scaffold1_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 19484 30 100.0 31 .............................. AGGTGAAGGAGGGGGCCTCGTGGCTCGGCGA 19423 30 96.7 31 .............................T CGTCCCAGGTGATCGCCATGGGTGCGAACGG 19362 30 96.7 31 .............................G GCGTCAACATCTGCGACCTCGACCCCAACTG 19301 30 93.3 31 .........................C...G AGGCCGCTCCGGTCGTCACGAACATCATCGA 19240 30 83.3 0 ..............G......CAA.C.... | ========== ====== ====== ====== ============================== =============================== ================== 5 30 94.0 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCA # Left flank : AAGCACCACACCCCGCAGCCCGCTACGCCACCGGCAAAGTCCGATACCAGGCGAACTGCTCGTGAGTGGGCATCCAGTGCTGGCCGCACCTGGAGCAGTACCAGCGCCAGTTGTCGGGGTCGTTGCGGAGGTAGGTCGTGTCCTTCCAGAGCCGGCCATGGATGTCCGTGTGGCAGGCCCGGTCAGGACAGGGCGGGGGAACGGGCGTGGTGCGCGGGCGAGTTGTGGTCAGCATGGGCGCCTCCGTGACTCGATGGGGTCAGGAGGGTGAAACGAGGGGGCTCGGGGCTGGGTGTGGGGCCGGGGCGAGGTGCGTTCGTTCGCGTGATGAATGGGGGATGAGGTGCGTGGGGGGGCCGGGGTCTGCTCCGCCGCCTCGGTCCGCTGCGTAGGATCTAGCGAGAACTCACGGCGAGGTGGGCATTTTGGGGCGAATATCGCTATCGGCGAAGCTTGCAGAAACTGAGGCAGGGGCGCCGTAAACCTGCTGGTCAGGGAGA # Right flank : CCCCGCCTCACCCCGACCCGGCGCACAGCGCCGCCACCCGCCTTGCTCCCCCCACCCCCACCTCCTACCATGAATGCGCTTTCACAACGCGTGAGGCGGGTCGGTGGGCTCGGGTTCTGGATGGTCGGAGCGGGCGGGACGGGATGAGGGTAGGGGCGCGTGGGTGACGGGGTGGCGGGGACGCCGACGGTGTATGACGTGGCCGGGCGGGCGGGGGTGTCGATCGCGACCGTGTCGCGGGTGTACCGGAGTCCGGAGTCGGTGCGGGAGGCCACGCGGGAGAAGGTGCTCGTGGCCGCGCGGGAGCTGGGGTACGTGCCCAGCGGGAGTGCGCGCGGGCTGGCGAGCCGGTCGACGGGGGTGCTGGGGCTCTGCTTCCCCGACTACTCCGACCCGGACGCCGAGAGCGAGGCGGCCACGGTGGACGCCGACGACGACCACGCGTTCATGCTCTACTCCGACCAGATCATCCGGGGTATGGAGCGGGCCGCGCGACGGCA # Questionable array : NO Score: 3.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 394261-394411 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKLL01000025.1 Streptomyces albidoflavus strain NBRC 100770 Scaffold1_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 394261 29 100.0 32 ............................. ACCCGCCAGGAAGTCCTGCTCGCCGAGGCCAC 394322 29 100.0 32 ............................. GCGACCGCATCGCCGATCTTCTGGTGCGGAAG 394383 29 96.6 0 .................T........... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Left flank : CCCGGCACCCACCCCCGCATCGTCCCCGCCCACCACAGAACCCCTCCCCGTAGCCCGGTCTGCCGCTGCGGGTCACCTTAGGGGACGGGGGGGTTGGGCGTCTTGGGGGTGAGGGGGTGGGGGTGGCGTGGGCGGCTGGTACGGGGGTGGGGCTTCGGGGGGTGTGGGCGGGGGGTGTTCGGGTGCGTTGGGGTGGGGCGCCGAGTGGTTGGGGGGAGGGGGCGTGGCGGGGTTGGAGTTGACGCGGGGTGTTGTCCTGTTCCGATCCGCAGGAGCCACTGGGCGAGCCGGGTCGGAAGTTGGGGGCTTGGTTTCACTTGGGTGCGACGTTGCTGGGGGGGCGCTCGAGAAGGCGGAGTCAGGTGGGGGGAACTGGGGGAGGATGGGCGGGGGCTGATGAATCGGGAGGGGGTGCTATGTCGCTTTCATGTGAAAGGTCGCAATCGGCGAAGCTTGCAGGAACGGGTGGCGGCGCCGGGTAAAGGTGCAGGTCATGGAGA # Right flank : CGTCGGGTCGACGTCGCTCAGCTTGATGGGGTTGTGCTCCCCGCGCCCGCGGGGCAACTCACCCGCCCTCCCTCAGCTCTGCCCACGCCCCCTCACGGCTCGCAAGCCCCACCCTTCACAGCAGCCCCCTCCGCGCCCGCGAAAAACTCCACAACCCGCCCCGCGCACCCCCCACCAGCCATCCCCCCATGTTCCCCGTCCCCCACCACCAACAACGACCCCCCAGTTCGCGCCCGCATCGCCCGGGCCCAGGGCAACGGCGTGATCACCTCGTCCCTGTGGGCGACCAGCAGCAAAGGCCCGTCCGTCCGGCCCGGTTCCACAGGCGGCCGCTCCGGAGCCGGCAAGCCCGCGCACGTGCTGGTCCCCGGGACCTCGCCGCTGCCCGGGAACATCGGGCGGGTCGCGCCCAGTACCGGGTAGGCGGTGCGGCGTTCGCCGTAGGCCGACCACTGTTCCGTGAACGAGGCGGCGTGGGTCACCTGGGAGCAGAGCAGTGC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 9059-9384 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKLL01000015.1 Streptomyces albidoflavus strain NBRC 100770 Scaffold4_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9059 28 100.0 33 ............................ GGACGACAAGACTCCCGAGGAGGCCCGCGGTGA 9120 27 96.4 33 ......................-..... GGTCGACGGGGAGATCCCGTATGTGGTGCGCAC 9180 28 100.0 33 ............................ GGGGCCGCCGCCAACGCGGTAGTGGGCGAGGTC 9241 28 92.9 27 ..............A.T........... GATGAGGCCGCATCCGTGCCAGAGGCA 9296 28 82.1 33 ....C....A.......C....G.G... GGTCACCGGCCAGACCTGGGACGACGTGGAAGC 9357 28 82.1 0 .................A.A.TG....G | ========== ====== ====== ====== ============================ ================================= ================== 6 28 92.2 32 GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Left flank : CCGACGCCGACATCACCCGAGCCGTCGAAGCCGGCGCCACGGGCTACCTGCTGAAAGCCGAACGGCCCGAGGAGCTTTTCACCGCCATCAGGGCTGCGGCTTCGGGGCGTACGGCGTTGTCGCCGCCTGTGGCGCAGAGGGTGATGACTCACTTGCGGAACCCGCGGCCCGAGCTGACGCCGAGGGAGCGGGACATTTTGCGGCACTTGACGCAGGGGTTGGGCAACCGGGAGATCGCCAGGGCGTTGTTCATCAGCGAGGCTACGGTGAAGACCCATTTGGGGCGGATTTACCAGAAGTTGGGGGTGGAGACACGGGCGGGGGCGGTGGCTGTGGGGAAGGAGAGGCGGTTGTTGGGGTGAGGGGTGGGTGGCGGGGGTGGGTTCGTGGATTGGGGGGCGGGTGGGGTGGGTTGGGGGCGTAGGTTGGGGGGTGCGAGGGAGGGGGCGGCGATGGGTAAAGGGATGGCAAAGGCCGTCTGAAGATGCAGGTGGGGAAGG # Right flank : GCCATGGACTGGTCCAGCGTGTTGTGCCTCACCTCACCGCCCGCACCATCACCGTCAGCTGAGGCGAGGCCGGCGAAGGCTGGCTAGTACCGATGTCCTCGTACCCCCACGAGCGGTACAGGGCATGCACCTTCCCGTTTCCTGCCGAGGAGTTGACCATCAGAGTCACGTACCGGTCGTCGCTGGCGGCGAGGAGTTCGTCGTGGATGCGTCGGGCGGTGCCTGTCCCGCGCCAAGCGGGTCGTACTCCGATCTCCTTGAGGGCGAGCGTCGGCTGCGCGGTGTACTCGTCGCCAGGGGCCGGGGTGGTGCGCTGCCAATACCGGTCGCCGTGCTCGATGCGGTTGGCGTACGCGTAGCCGACCGGCTTGCCCTCGGAGTAGGCGAGCACGGCGACGAAGCCGGGTTCGCGGCCGTGCCGGTCCAGGCGCTCGCCAAAGACGAGCGTCGTGTAATTCGGGAGGTGCAGGAGCGGGGCTCGCACCTCCGCGTAGACCTCG # Questionable array : NO Score: 5.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGAGGGCGGGGGTGTTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 386978-386767 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKLL01000004.1 Streptomyces albidoflavus strain NBRC 100770 Scaffold5_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 386977 28 96.4 33 ............C............... CGACCGCGCCTGGGCGGCCGGGGCGATCCTGGT 386916 28 100.0 33 ............................ CAGGTTGAACCGGGCGGTCTCCGGAGAGACCTC 386855 28 100.0 33 ............................ CCCGGAGCAGTGCGCGAGGAGCGCGGCGGCTTC 386794 28 92.9 0 ...........A..........C..... | ========== ====== ====== ====== ============================ ================================= ================== 4 28 97.3 33 CTGCTCCCCGCGAGTGCGGGGGTGAGCC # Left flank : GGGGGCCACGAGCAAGGCTCAGGCTCACAGGGCCGGGCCGCTGGATGAAGCATCGGCTGTGACGGGGCCGCGCTCCGGGTTGCTTTGTGGAGGTGGCGACTCGGCTGCCACGAACTCTCTGTCCCGGCTAGCTTCTTCATGGGCGGTGCTTGGGGGCAGCTGGGGGAGGGCCCTGCTGTCAGCGGGCTTGGCCTGTCGGGTGCTCTTCTCGACTCCGCTCGACTCCGCTTCGGGGTTGGCTGGGCAGATCGCCTTTGCGGAGACGGGTCGCGCGGCCACGATCGGGACCATCCCCAGCGCCCAAGGTAGGCAGGCTCAGGCAGTGGCGCCGGGGCTTGGTGCTTCTACCGGCCGATGACCGGGATGGCTATGCATGCAGTGCTCTGCGGCGAAAGCAAGGCGGCGGGGGAGGGATGCGGGCGGCGGAGGCTAGGGTGGCGGACATGGCGAAGTTGGCGTGGAACGGCGACTTGCCGAGGTGAAGATGCAGGTCAGGGAGA # Right flank : TCCCGGGCTGCAACGCACTGGCCATGAGGAGCCCGCGCCCTTGAGCCCCGCAGAGCCATGGTCGTATCCCTGCGATGAGAAGGAGCCGCATCCTCGACCGACCTAAGCGTCCATCGGGTAGGAAGAGGCGAACTGGGCGCCACCGGAGAGGACTTCTGCAAAACGTGTCGGGGGCCTTCACTCCACAGCGCCCCTGCTCACCGACCGTATGCCCAAGGCGCACGACGTGGCCCGCCCACGAGCCCGTCAGGCTGTCCTCGGCCCCCCGCGCGCCCCAGTCAGGAGCGCCCACCCACCGCTGGCCCCGCCCCCGCCTCCCCGGCAAGCGGTCACGCAACCCCCGCAAACGCCTCTGCCACGTGCTCGCGGCAGGCAGCGCCCCCGCACCCGCACCCGGAAGCTCCCCTGCCCGGTCCTGCCAAGCCGGGAGCATGCCCCCGAGGCGAGCCCAGGCAAGGCCCACCGGCCGCCCCTCTCGCCCCGCCACAAGGAACGCGACG # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGAGTGCGGGGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 76567-76715 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKLL01000014.1 Streptomyces albidoflavus strain NBRC 100770 Scaffold4_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 76567 27 100.0 34 ........................... CCGCCTCCTCGTGCGGCTTGAGGTCCTTCCAGGT 76628 27 100.0 34 ........................... CCTACGGCCTCTCCGTCGCCCATGTGACGGCGGC 76689 27 96.3 0 ..........................T | ========== ====== ====== ====== =========================== ================================== ================== 3 27 98.8 34 CTGCTCCCCGCGCGTGCGGGGTTGGTC # Left flank : CGATGAGCCTGCTCCGAGCAATGGACATGCCGCTCTCGCCACGCGAGGTGCGGGTGCTGAGCAGGGCCGCACAGGGGGACTCGGTGGCGGAGATCGCCCGGGGGCTTTGCCTGTCGCACGGGACTGTGCGGAACTACATCGCTTCGGCTACGCGGAAGGTGGGGGCGAGGAACCGGGTGGATGCGATTCGGATCAGCCGGGCGGCGGGGTGGGTTTGAGGGGGGTGGGATTGAGGGGGCTGGTGGGGGCTTGGGTGGTACGGGGATGGGGTTGGGACTTGGCGGGTGGGGTGGGGGGTTGGGTCGGGTGAGGCTGAGGAGTGGGGTCGGGGTGTGAGTGGCTGGAAGGGAGGGGTTCGTGGGAGATCTGTCGGGTTCAATGGGGGGCGGGTGCTGGGTGGTCACCTTGGAGGGGATATGAGGCATTCGCCCACATTGCCGGAATCTTTGAAGCTTGCAGGAGAGAGTGACTGGGCTGGGTGAAACCCCAGGTCAGCGAGA # Right flank : TCCCTCCCGGCAGCCGCCGCTCCCCGCCCACGCCTAGGTCGACGCGGTGCTCCGGCTCCCCGCCGCCGAAGGCTCCCCCAGCCCCGCCGCCAGTTCCCCGTACAAGGCCGACTCCCGAAGTAGCGAGGCGTGGGTCCCCAGGTAAGGGGTCGCCCCGTCCAAGAGCAGGACGCGTTGCCCAGGTTCAGGCGCCGGAAAGTGGTGGCTCACTGTGATGACCGTGGCCGGGTGGGAGGCGAAGGCCAGCTCGGTCGCGGCCCGTGCCCCCGCGTCCAGGTGGGCCGTGGGCTCGTCCAGGAGGAGCAGGGGCGTAGGTGTCAGCCAAGCCCGGGCCAAAGCGATGCGGCGGCGTTCGGACGGGGTGAGGTGGTCCGGGCGGAGGGGGCGGGCGGGGTCAGCGGCGAGCGGGGCCAGGGTGAAGGTGTCGATGGCTTCCGTGATGCGGGGGGTCGGGGCGTTGGGGGCGAGGTAGGTGAGGTTGTCGTGGAGAGGGGCCTCGA # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGTTGGTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGTTGGTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 182776-182259 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKLL01000012.1 Streptomyces albidoflavus strain NBRC 100770 Scaffold9_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 182775 29 100.0 32 ............................. TTGAGCTCCAGGTCGAGCGACGGGAGTTCAGC 182714 29 96.6 32 ............................T CTACGAGGCGGCATACCTGGAAGCGGACAACA 182653 29 100.0 32 ............................. GTCTGGGCGGCGTGCACTCGGGCTCGGGGGCG 182592 29 100.0 32 ............................. GTGTGGAGCTGACGGCGGAGGTACTCGCTGCG 182531 29 93.1 32 ...........A.....A........... ACGTACATGGAGCTGTTCGAGGAGTACAAGGA 182470 29 93.1 32 ...........C.............C... GACGTCGACAAGTGCTACTGGCGCCTGGTGGA 182409 29 82.8 32 ...T..T...T..A......C........ TCCTCGGTGGTCAGCTCCTCGCTGCCCGAGTC 182348 29 86.2 32 A.......T...C...T............ TCAGGGAGTCCTTGAAGGGTCTCCAGGAGAAA 182287 29 86.2 0 .......A....C...T......A..... | ========== ====== ====== ====== ============================= ================================ ================== 9 29 93.1 32 GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Left flank : GGGCAACAGTCATACCGGGCCCGGAGGCCAGCGGCCCCGTTGCAGGACCACGAAAAACATAACGGGGTGGGGGGGGTGACTGGGGTTGTTGTGGCGGGGGAGGGGGCTGGGGTGGCTTTGCTGGTCTCTTGTTGGGTTGCGGTGGGGGGATTGGGGGAGGATGGGCGGGGCTCTTGATGGGGTCGAGGGGAGGGTTGTATGCGGCTTTCAGGGCAATTGCCGGAATCTGGCAAGCTTGCAGAGATGGGGTGTGGGGGCGGGTAAGGCCGCAGGTCATGGAG # Right flank : AAGCGGTCGGCCGCGTGCCCCGCCTCGGCGTGCTCCGCTCCGAGGCGCCCCCCACCCCCTTCGAGTGATCCCCCACCCCCCAAGTGCATCCCCCCACCCCCCGGGCAGCCTCCTCCAGGGAGTTCGTCCACCCGAGAGGAAGCACCGCGTGGGACTGTCACGGAAGTACGGAACCGCTATCACCGAAGGGCCGACCCCGGCCGATGTCGCCGGGCAGGCTGCCCTGCCCTACCCCGACGGGTGGGCTGCCCTGGCCTTCTCCGAGGAGTTGACGAGAGGGAAGGTGCTCACCCGGCCGCTCGCCGGGGAGGATGTCGTGCTGTACCGGCTCGGGACCGGTGCTCTGCGGGCCGTGAAGCCCTACTGTCCCCACCTCGGCGCGCATCTGGGGCTCGGCAGGGTCGACGGGGAGGACCTGGTCTGTCCCTTCCACCTCTTCGCGTTCGGGCCCGACGGGGCCTGTGTGCGGACCGGGTACGAGACGGCGCCGCCCCGGTCGC # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //