Array 1 179217-177662 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFKU010000001.1 Latilactobacillus sakei isolate AMBR8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 179216 36 100.0 30 .................................... TATCCAAGCGATAGTGTACTATTACTTATA 179150 36 100.0 30 .................................... TTGGCCAAGCATTGAAGCCGTTAAAAGCTA 179084 36 100.0 30 .................................... TGGGGTCTAATCCATCGTAAGCTTCTTTTA 179018 36 100.0 30 .................................... AGAATCCAGAATTCACGGCAACCTGATAAG 178952 36 100.0 30 .................................... AACTAGAATCAGCATTTGAAAATGAAACGG 178886 36 100.0 30 .................................... TTGGTTGAGTTTTTAGAGGCTTATGAGCAC 178820 36 100.0 30 .................................... ATGCTCACATGTTGGAAGAAGAACGTATAT 178754 36 100.0 30 .................................... TTAAACGTATTATTGGTATACCACCGCATC 178688 36 100.0 30 .................................... TTCTTTGGTGGAAAAGATAAATGATTTGGC 178622 36 100.0 30 .................................... TTACGTCGACCTTTTTAGCAACTTCTTCTT 178556 36 100.0 31 .................................... AACGGCAATTGGTACGCCTACGACAAAGAAT 178489 36 100.0 30 .................................... AGCGCAACAACAACGCTGATAAGCACGATT 178423 36 100.0 30 .................................... TTACTTCGTTTGTAGACTATAATGAGCTTT 178357 36 100.0 30 .................................... ACAAACATTTGTTTAATTGGATTGTCATAA 178291 36 100.0 30 .................................... TAACAATGGCATTTTTAACAACAGATTATA 178225 36 97.2 30 ............................A....... TGAATACTACGGGTAACCGTTTAAAGACGT 178159 36 97.2 30 ............................A....... TGTGCTTCAACCTTGTCCAGGCGGTGCTTA 178093 36 97.2 30 ............................A....... AATCTAACGTTTGACTTGGCATTACAGTAA 178027 36 97.2 30 ............................A....... TGGTGTTATCGGTGTAAGTCCAAATTGTCC 177961 36 97.2 30 ............................A....... ACGCGCAATAATAGACACACTTTCGCGCTA 177895 36 97.2 30 ............................A....... TGAACAGTTTGATGGGTCAGTTAGGATGAT 177829 36 97.2 30 ............................A....... TGTTCAGGATTAATCTCGCCGCCTTTCGCA 177763 36 94.4 30 ..........................T.A....... ACGGTTCAAGAAGATTTTACAAAGTGGTTT 177697 36 88.9 0 ...........................CA....G.T | ========== ====== ====== ====== ==================================== =============================== ================== 24 36 98.5 30 GTTTTAGAAGAGTATCAAATCAATGAGTGGTTCAAC # Left flank : GCGGTTGATTTAAATCATCTTTTTCAAAATAAGTTGATCAAAAAATTTACAGCCGATCTAACGGATGAACAACGACAAAAGGTAGTTAATCTGAATAATGAATTACGAGCCACTATTTTAGAAGCCGCGTTTATGTATGAATTAGCTTTAGATATTGACCATGAGTTAGATTTGCAAAAGTTAATTAAATTTTGCAATTTAAAATTTTCGAATGATGTTCAAGATGATCCATATGGTATAATAGAAAGCATAGTACAAACTGCTATAGAGTTACAAGAAACAAGAATTATCACGTTGATCAACGTTTCGCACTATCTTAGTATCAACCAGTTTAATGAACTGGTAAGACTAGTTGCGACATTGGATGTGAAACTCTTTATCATTGAATTTTCAGAATTGGCAACGCCTGACAGGTACCAAGAATGCTGTTATTATCACATTGATAATGATTATGTTGAATGGCGTTACGAATAAAGTGAGTATTTGATGAAAAAACATCG # Right flank : CACGCTAATAATCGTAAATTCTTTTAATTTAAGTTTGGGGAGTACCTTTAAAGGGGTACTCTTTTTTATTAGATTTAATGCATATCCTTGATTGATATTTCACGATTCGACTATTGAAAAGCGTTCTCATTTAGCTTAGAATTAAGTCAGCAACAACGTGCTATAATGCGATTTTTGGAGGGTCAGTAATGTCTAAATTAGAAATTATCGATTTACACGTCGGAATTGACGGTAAAGAAATTTTAAAAGGTGTTAACTTAGAAATGAATACGGGTGAGATTCACGCCATCATGGGACCAAATGGGACCGGGAAATCAACCCTTTCAGAAACCATCATGGGTAATCCTAAATACGAAGTGCTTCAAGGTGAAATTAAATTAGACGGTCAAAATATTCTTGAAATGCCAGTTGATGAACGGGCGCGCGCTGGCTTGTTCTTAGCGATGCAATATCCATCTGAAATTCAAGGGGTTACAAACGCTGAATTTATGCGGGCTGCT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTGGTTCAAC # Alternate repeat : GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //