Array 1 76051-73421 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHBBD010000014.1 Bifidobacterium sp. 6T3 Contig_14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 76050 36 77.8 35 ...........A.CA....A.ATA.......A.... ATGCTCTCCCCGTCCCCGGTAGTCTTCCACTGTTC 75979 36 83.3 38 ..T.........A........ATA.....A...... AATCCTCGGCGGTGCCGTCGACGCCTACATGCCCCCCT 75905 36 97.2 36 ........A........................... GCGGTAACTCTTGTCCGTCTCGGTCAGGACGACGGC 75833 36 86.1 36 ...A.......A.........ATA............ ACCATTGTCGCGGAACAGGACCTGCACCATGTTGGT 75761 36 91.7 35 .....................AT...A......... ATCTGCATGTCCTCCCACGCGTGGAACTGCCCGTC 75690 36 83.3 37 ..A.....A....C....A...T........A.... ACGTGTTGTTGTCCACCTCCGGGGTGTTCGGGTTGAT 75617 36 83.3 34 ...........A......A..ATA..A......... CAGATGGTTATAATCAGAATCCTGGCGGCCCGAA 75547 36 94.4 38 .........C.........A................ GTCGATCTGGTCCGCGCGTGCGCCGCATTGTGCGACCT 75473 36 100.0 37 .................................... TTCGACCATGCTCACCGGGTCACGGCAGCGCACATAC 75400 36 100.0 37 .................................... TCGCCTGTCAGAGGGCGATGTGGTATTCGATGGTCAT 75327 36 100.0 39 .................................... GGGGACGGCCTTCGTGTACCCCTTGCGGTGTGTGGCCTT 75252 36 100.0 35 .................................... GACGGCATGGTCGTCTACCCGGGCCAGAAGGTCGA 75181 36 100.0 38 .................................... AGCTGGGACTGCTTCGACAGTGCATCCTGCTTGGTCTC 75107 36 100.0 33 .................................... CACACGGGCCGGAGCAAGATCGGTGCTGGTGTT 75038 36 100.0 36 .................................... GCGGCGCAGGCTGGCCGCCAGATGCGTGGCGGGAAT 74966 36 100.0 36 .................................... GTTTTACAACCAGCTTGTCAACGTCATTGGACAGCA 74894 36 100.0 36 .................................... GTTTTACAACCAGCTTGTCAACGTCATTGGACAGCA 74822 36 100.0 37 .................................... TTGATGCATAGTCACGTTGTTTGGCCTGATTGATGCT 74749 36 100.0 34 .................................... AGGGCAGATTGAAGAACCTGCGCATGGTGCTCAG 74679 36 97.2 37 ..................................C. TGCGACGGATATCGCCCTTGTTCAGGGTGCCACGCTT 74606 36 100.0 35 .................................... CCCGCCGTCCCGAGGTCGCGGTACCCCTGCTCGAT 74535 36 100.0 34 .................................... GGAGAGCAGCGTGTACAATAAGCCGATTCCACCG 74465 36 100.0 37 .................................... ATGCCACGGAACGCGCGTGGATGCTCGCGTTGGACGA 74392 36 100.0 38 .................................... GTGAACGACATGCTCAATGTCGAGCTGCCGTTCGCCGT 74318 36 100.0 35 .................................... TTGCGATTATCGACCGGTTTCGTCGATATTCATCA 74247 36 100.0 37 .................................... TAAGCCCCCCCCCCCCGAGCTCGCGGGGCATCAGACT 74174 36 100.0 37 .................................... GGGCAACGTCCTCAAACGCAAGGGCGACCACGACATC 74101 36 100.0 34 .................................... CTGGAATGGGGTTGGCGGCCTCCGCGACCTTGAT 74031 36 100.0 36 .................................... TTTTTCTCCCTTCAAATATTTGATACCCGTAGGTAT 73959 36 100.0 35 .................................... AGCAGGACTACCTGAAGGACATGCTGTGCGTGCAG 73888 36 100.0 37 .................................... TCGCGCTGATGACCGTCTTCGCGTTCCCGGACCCGTC 73815 36 100.0 36 .................................... ATTGCGGTCCTCCATATTCTTGGCGATGTCATCGAA 73743 36 100.0 36 .................................... GTCGAAAGCACGGTCGATGGCCGCAAGCCTGTGGGC 73671 36 100.0 36 .................................... TTCCATTTCCTCCTCGGAGGATGGCCTAATTGCATT 73599 36 100.0 34 .................................... GGCTCGCACTTCCAGAATGTATCCGACGAATCGT 73529 36 100.0 37 .................................... CGCTAAGCGGGGTGCCGGGGTTGTCGTTCTGCCAGTT 73456 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 37 36 97.1 36 TCCTCAACGAAGGTGCAAGGCGCTAAGCCTTGCAAC # Left flank : ATACTCCGCAGAAAACCGCACGAGTAAATGATTACCTCGCCGATATTCTCGTACAAACAGTCCACTGCGGTTTCAATCCTTTAGACTCTGTACCCACGACAATCTACTGTCTCCGGACAACCCAACGAAAAAAACGATTCCATCTTCAAGCGATGTTCTCGCACGCGTGTTTCACTTAATTGCGTGAGTCCGAGGCAACATTCATTCACCATAGAAGACACAGTTGCATCGTCAACCAGACGATCTAGTTCAGCATGGCATCGTTGTCGATTCCCAAGTGCGATTTGACTGTTCAACGACTGGAATCACGCTCCGGCAACGCACCCTGCTCCGCACTAAGCCTTAGTACAAGCGCGAAAACGGACACCGCCATTCACTTCCAGTATCATTATTCGACTATACAAATCTCAAGTGAAGTTGAATTGCATTCAAAAAAGCGCAAGATACAAGGCATTGCAACAGGATTCGTGACTTACCAAGTCCGCGATGATGAGTCACTT # Right flank : AGCCATAGTTTAAATGCTTGAGAAATGCACGTCAAGATACGCAAACCGCGAGCGCTCCGATAAAATATGACGTATCGGCAATAAGCAAACCAACGGCATGGTCTCAAACCGCACTAAAACCAATGCGAGCGCTCCACGGTTTTTTCAGGATGATTCAGCGCTCGCACCTAGCTAAGAGCCCCAAGAACCGTAGGTTTACCGCTATTCATTTATCAAGCGACACGATCGCATGCACCTTCGCACACCGATTCTGTTTCAAACCGTCAATCAGATAATTGCCGGAATGGATACATCCTGGTAGCTGCGCTTACCAATGAACGTCATGTCTCTGCGAGCAGTTGCCTTTATTCCCAAAAAGCAGATAAGCACGGAATCGGTCTCCAGATCAATTTCCCCCTCTATCCGCTTCCTAACATCCAAGATTTTGGATGGCCTGACCTCAAGCAGAAACACACTGTGTTGCACACGCTCACCACACGTCATCAATATCTTCGACACAT # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCTCAACGAAGGTGCAAGGCGCTAAGCCTTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-37] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //