Array 1 59702-59402 **** Predicted by CRISPRDetect 2.4 *** >NZ_FBAL01000021.1 Campylobacter coli isolate H073580401, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 59701 36 83.3 30 AACCG.T............................. TTTAAGCCATCTTGTAATGGTTTATCATCT 59635 36 100.0 30 .................................... GATGATGAGTTCAGCATTAGAACTTTAGTT 59569 36 100.0 30 .................................... GAAAAACAAGAAACTTTTAATGCACAAGGT 59503 36 100.0 30 .................................... TGATTTTGCTTTCTTTGTTTAACTTATAAT 59437 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 96.7 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : TTATATCCTGCTCATCTTTCACTTGCTAAGTCTTAACCATAAGCTTAAAAATGATTATTTTGCTAGAGTTGCCATAAACTGCGTGGCATTGTTTATTTTTATTTATGCGGGAGTTAATATTTCGATGACTATAGGTTTTGCACCGGTTGTCGGTATACCACTGCCTTTTTTTAGTTATGGTGGAAGTTCTTTTACAATTTTTATGATTTTCTTTGGAATTTTACAACATTTAATCACTTTTAGATATTTTTGGACAGATAATAAAAACAAATAAAATAACTTTAAGCAAAGATAAGATATAATTCTATCTTCACAAATCAAAGGCGGATTTATAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTTGGTCGCAGGTTCGAGTCCTGCTAAATCCACCACTACTTTAGTTGTAGATATCTAATCCCAAAAAATGAATTAAATTAACTTTAACTACAAATAATCTATACCGTTTACTATCACCTTAAATTGAAATAGA # Right flank : AGACTTTGAACAAATAAAGAAAAATAGAGCTTTTTGTATACAAAAATGTATAAAAATATGCTATCATTTTAAAAGAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTCGGTTAGCCACGCAGGGTTACAATCCCTTTAAAACCGTTAAAATTCAAACAAACTAGCTTGTCTAATTTTATTAGACTTAGTTTGCTTGATTGAATATCAATATACTTTTAAAAGCTTCATCATAGGCCATGTTTTTTGCTCGTCTTTAAGGCGATATCTTCCCTTAGTTTAAAATCAGCCTTGATTTTTTCTCCAAGCGGGGTTATAATGTATTTTTCAAAAATTTTCAATCCCTGAATTCCTAATTTTTTAGCCTTTACATTTCCTTCTTCTGCATTTGTAAACAATAGCTTTTGATTGTCTGTTAAGTTTTCAAATTTATTATCATGTTTTTCAACACAAATACTTGAGTTACTGATATCAAAACTATTATAATAAGCAAATTCGGGT # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.08%AT] # Reference repeat match prediction: R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //