Array 1 196359-201430 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATTV010000004.1 Psychrobacter sp. BI730 NODE_4_length_267337_cov_303.035, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 196359 28 100.0 32 ............................ ACCTTGTGAGCTAGTTGCATATCAATCAGCGC 196419 28 100.0 32 ............................ TACCATGCAAACAATTGATATCACAGCCATGC 196479 28 100.0 32 ............................ ATAAATAAGGCCTCAGAGCCATGCTGTGACAT 196539 28 100.0 32 ............................ AACAATGAAGTGGTATCAGTGTTGGTTCAATG 196599 28 100.0 32 ............................ TTCAATCTTTGGCTCGTAGTCTGTGACTTCTA 196659 28 100.0 32 ............................ TCACAAGATGCAGCCGTATGTTAAGCCTGACT 196719 28 100.0 32 ............................ TTATAGTAATCTACGTTCGTCTGCTCATAGCC 196779 28 100.0 32 ............................ TGAAGAAAATATATCAGCATATGTAAATGGAC 196839 28 100.0 32 ............................ TAGTGCTAAGAAGTCGGCTGGGTGTTTGATAG 196899 28 100.0 32 ............................ TGGTCAATCCGCAGTCGTCGTAAGTTAGTCAT 196959 28 100.0 32 ............................ CTGAACCAGCCACTGGCTTTGCAACAGTTGAA 197019 28 100.0 32 ............................ TGTATTATCACCGTTGAGCAACTGCTGTTCTT 197079 28 100.0 32 ............................ TTTTGTAGCTCGCCGCACCTGCCTTAACGCTT 197139 28 100.0 32 ............................ TTGCGCTGCATCAGTTACCGTGACTACCATAA 197199 28 100.0 32 ............................ TTTCCAAATGACGCGCATACCTGTATCAATCT 197259 28 100.0 32 ............................ TCATTAATAAATAGATAGCTCGTATCGTGAGC 197319 28 100.0 32 ............................ AAATAAAAGAAGCGATAAACCATCTTGTTAAT 197379 28 100.0 32 ............................ GTGTCGTCTAAATACTCGCATCTAATAGCAAT 197439 28 100.0 32 ............................ TTTGACAATATCAAACCTTAAAACTCCATCCA 197499 28 100.0 32 ............................ GTTGGCAATACCGAGGTGCTGACTTGCCATAC 197559 28 100.0 32 ............................ TGCACTTCATCAAGCCCTGTGATTTCGTTAGC 197619 28 100.0 32 ............................ GACAGCAACAGCAAACCCCGTATGGTTTTTTG 197679 28 100.0 32 ............................ ATGTGTATATTGATGAGGAATTATAAAATGAT 197739 28 100.0 32 ............................ GACAAAGATATTATCGTCTATAACGCACCGGT 197799 28 100.0 32 ............................ GATGAACCGTTACTTGAATCACCAATGTTGCA 197859 28 100.0 32 ............................ TTTGTCACCCTTTAAGCCGGTATCGCCCTTTA 197919 28 100.0 33 ............................ CGCACAAAGCGCAGTACGAACCTACGGTCTACG 197980 28 100.0 32 ............................ GATGAACCGTTACTTGAATCACCAATGTTGCA 198040 28 100.0 32 ............................ TTTGTCACCCTTTAAGCCGGTATCGCCCTTTA 198100 28 100.0 33 ............................ CGCACAAAGCGCAGTACGAACCTACGGTCTACG 198161 28 100.0 32 ............................ AACAGAGCGTCAAGAAAGGCTATGAATATTGT 198221 28 100.0 32 ............................ TCTGACTGCTCGCCCTGTGCGCTTATCAAGTC 198281 28 100.0 33 ............................ CTCACGTTTGTCAATGTCATCTGATTTGTGCCC 198342 28 100.0 32 ............................ TATGGTGCATGGGTTAATGATGATAACAGCGA 198402 28 100.0 32 ............................ TTGCTGCCAATGCGGTGCTAGTCCACGGAGTC 198462 28 100.0 32 ............................ TAAGTATGGTTATGATGAAAAATACATGAGGC 198522 28 100.0 32 ............................ TGTGTACTATCATCGCCGTTCACCACCTCTTG 198582 28 100.0 32 ............................ TCTAACTAAATCGTATTTTGTCAAAAAACCAT 198642 28 100.0 32 ............................ ATAGCTGGCTGTGATTCGATAAACATTGGGTA 198702 28 100.0 32 ............................ AAAGATGATGTATTGATAGCTAGTATCAACGA 198762 28 100.0 32 ............................ TGCTATGGCAGCAGGGACGGCACTACACAAGC 198822 28 100.0 32 ............................ ACAAGACGCTGAACAGCGTTGATGAAGCTAAA 198882 28 100.0 32 ............................ TCACATGGGCGACCTGAAGGAGTCTTCAGCAA 198942 28 100.0 32 ............................ AACTGCCAGCTGCAACCCAACTCAAAATAGGA 199002 28 100.0 32 ............................ TGAACGATACTTCGATGCTTGGCAGTGGCGAA 199062 28 100.0 32 ............................ TCAAAAAGCTCTTGAATAGCCACATCTGCATC 199122 28 100.0 32 ............................ TTCTACAGGCTTATAACCTAGTTCTGCCCTAG 199182 28 100.0 32 ............................ TTTAATGCTAATGTTAAGAGTTCAGAAGATGA 199242 28 100.0 32 ............................ TAAAGTATCGAACCATTCTTTAGATTTCTTAT 199302 28 100.0 32 ............................ CGTACCACTGTTAGCTATTACAGGTACTTTAG 199362 28 100.0 33 ............................ TTTGCGCTTTGGGGGCTTCCCTAGTTCATCTTT 199423 28 100.0 32 ............................ TTTGATAAAAAATATAGCACTGGCCTTTCCCC 199483 28 100.0 32 ............................ CTAAACTCAGAGAGATACAAGGTTATGAAGCG 199543 28 100.0 32 ............................ TAGCCCTAAACCGCTTTCCGTTCTTACTAACC 199603 28 100.0 32 ............................ GTCCACTACATTGATCTAGTTCAGGATTAGTA 199663 28 100.0 32 ............................ AACAGTGCGGCATTATCGCGCAAGGCTTAAAA 199723 28 100.0 32 ............................ CATACCGTAATCGCGAGCGAAGTAATCGCTTG 199783 28 100.0 32 ............................ TAAAATAGCTAAAGATTCAGTATCTAGTCTAT 199843 28 100.0 32 ............................ ATAGCAAAGACTGCTCTAGCTGCTGTAGATTG 199903 28 100.0 32 ............................ TGTGTATTCAAATGCACCGTCTATGACGTTAG 199963 28 100.0 32 ............................ TACAGCTAAACCTACAGCTTCTAATACCTTAG 200023 28 100.0 32 ............................ TAGCAAAAGCGTTGATCGGTGTATTCATGGGT 200083 28 100.0 32 ............................ TGAATACGATAGTCCTAGCGCCAGCACACTAG 200143 28 100.0 32 ............................ TGACGAAATTGTTTACGTTGAGCCAAACATAA 200203 28 100.0 32 ............................ CATTTGACCCTATGGCGTTATTCGCAGGTGGT 200263 28 100.0 32 ............................ AAACAGGGCTTTACTTAACAAGCGAGGTAATT 200323 28 100.0 32 ............................ TAGACATAACACTAACTCGGTAACTCTTTCTT 200383 28 100.0 32 ............................ GTATCGACGCGACTCAATAGCGATACCGCCCA 200443 28 100.0 32 ............................ TATTCTTTGTGCGTGGTGTCACATCACGAGGG 200503 28 100.0 32 ............................ TTGATGCCTTTACCCTTGCCATGTACGCCAAA 200563 28 100.0 32 ............................ ATTGGCAGACACAAGGCAGAACGGTCATGAAA 200623 28 100.0 32 ............................ GTTGTATTCAACACTGAGTACAACAGCCACAC 200683 28 100.0 32 ............................ TAGTAGGGTTACTAAAGAGTACGGTAAAAATA 200743 28 100.0 32 ............................ TGTAAGAATGTAGCAGAAGACCCTACTAAATA 200803 28 100.0 32 ............................ TACAGGTGCAGGTGGTGACACTTTCAGAAGTG 200863 28 100.0 32 ............................ AATGATGTTTAAGAAGTAACCTCTACTTAGCA 200923 28 100.0 32 ............................ TAATCGCCACACTGAATAGTCATCATCGCTCA 200983 28 100.0 32 ............................ TATAAGACAGCCGATACAGTTTACAGAGCACT 201043 28 100.0 32 ............................ TACAGGCTGGGCATTAAACCTTGGGCTGTTTA 201103 28 100.0 32 ............................ TAACACGGTGCAAATCAGCGTCTTGCATTAAT 201163 28 100.0 32 ............................ ATCATAAAACCCGTTACTGGTAGTTGCTTTTG 201223 28 92.9 32 ........T.....G............. ACTATCAGCTCACGCGCAACAAAATTTGAATG 201283 28 100.0 32 ............................ GATGATTTGACGGACTTAGAACGCGCTCAGTT 201343 28 100.0 32 ............................ GACCATCAAGAAGTGATTTTGCCAGGTCAACC 201403 28 96.4 0 ........................T... | ========== ====== ====== ====== ============================ ================================= ================== 85 28 99.9 32 CTTCCTCACCGCATAGGTGACTTAGAAA # Left flank : GCATGTGAAGCGCATCAATGAGGTTGGTGACAAAGCCAAAGGTCACGTTATGATCAGACGCTACCGCCATAAAAACGTGCTTAAGCAAGCTGAAGCATTCGCTGAGCACAAAGGCATTACGCTGGAGGCGGCACTGATACACTGCGCCAAACACAAGCAGGATAATAAGCCCTATCCGTATATCAACTTAAGGAGCATCAGCAACAATCAACCCTACGCATTATCTATCATTCAAGAAATGGCAGATAACGAAACTCAAGGGTCGTTTAACAGCTATGGCATTAACAATGCGGTAGCTAAGGTTACTGTGCCCCATTGGTAAGCTACTTATAAGGTAATGACGAATTACCCAAAAATTGGGACAAAAAACCCTTTTTTTGAGCTATTTAAAAACTTATAATGAAATCAATCAGTTACACTAGGTCGAAAAACGGAGGGTAAGATAGGGTATTTCACTCTCCACGCCTTATTGTAACTGAGTTTTTTGAGGTATAATTCCT # Right flank : AGTGACCTATTACAAGCAAATCAAGTAGAGCACATTCATCATCAATTTATCAAATTTGTCTCTACGATCGTTTCAATATAGTACCGTCTTATTTTTCATAGTAAACCACTGAGACTATTTAATGACTGCTAAGGTCTAGTAGTTGATATTTGTTTATATCTCTGTTAGATTTTAACTCGATACATAATGTATCGTTTTATATATAACTGTGTTTAAACAATGGCAAACCTTTCAGTGTTTGCACATCACATTGTTATAACAGTTGTATTAATCGTATTTCATTCCTGCTAAGGATAGCAATTATGAACAACCATTCAATCAGTTCACTCTTATAAACCAAACTTCTTCAGGCACCGATCAAATAGTATTAACTTAAGCTATAAAGCCCTAATAGTGTGTGTTTAATGTATGAGTACGCTTTAATATCGAGAATAATTCGAGTCATATATATCGCTATAAATATGCTAGGCATTAGCCCTAATGCTCTATCTAAGAAATAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCTCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //