Array 1 41560-38663 **** Predicted by CRISPRDetect 2.4 *** >NZ_LTBF01000016.1 Corynebacterium striatum strain 2230 lasergene_28_len_T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 41559 29 96.6 32 ............................G CAGTCGTGCGGCCCATTCGTTGGCTTGTCGTT 41498 29 100.0 32 ............................. GCTGCACAATCGCGATGTATCCCATCGAGTTG 41437 29 96.6 32 ............................G GCCAGGATATTGCTTGGAAATGGATTAATGAA 41376 29 100.0 32 ............................. CATCCAGCGGTTAGATCGTGAAGTAGGGGAGC 41315 29 100.0 32 ............................. GGGAAAGTCGGTAATCATCGCGTAACTGATTA 41254 29 96.6 32 ............................A AGGACGGGGAACACAAGCTCAAATGGGCTTGG 41193 29 100.0 32 ............................. CTGCGCGGTCAGGGGCTTGTGGTTAGAGTTTT 41132 29 100.0 32 ............................. AAATCAAAGGATACATGATGGCATCCATCAAA 41071 29 100.0 32 ............................. TCGAAGTCACACAACACCTACTCCGAACTTGG 41010 29 100.0 32 ............................. GAGCGGCGCTGACATAAATTTTTGCCGTGTTA 40949 29 100.0 32 ............................. AGCAATGTGCAACTTTAGGGGTTGGCGTTCCC 40888 29 100.0 32 ............................. CTACCAACCGCGCTCCATCAGCTTCCCAGAGC 40827 29 100.0 32 ............................. CAAGCCCCGCCGCCGCAACAAGTACGAATCAT 40766 29 100.0 32 ............................. CACCGCACAGAACACCCTCGACCATGTGATCC 40705 29 100.0 32 ............................. GACCCGTTGTTAATATCCGCGACGGGGGTTGG 40644 29 100.0 32 ............................. TGGTTGCGAGGAATTCCATCTTGGAGCACTTC 40583 29 100.0 32 ............................. GTCTCATCTTCACCTTCCCAGGTGATATTCGC 40522 29 96.6 32 ............................G GGCAGCCCTCCAACCAGGTTTCCGGATCAATA 40461 29 100.0 32 ............................. GCCTACCGAGGCACGCGGGAGGAATTGCGTGC 40400 29 100.0 32 ............................. ACCGCCGCCCACGCTACGCGATGAGGTGGCGA 40339 29 100.0 32 ............................. ACGGGCCTGCAGCTCACCCTTCAGCGCTTCGG 40278 29 100.0 32 ............................. CCGGCCATTCGTTCGCGGCCTTGGACTTCCAG 40217 29 100.0 32 ............................. TTGGAACGCTCCGACGCCCTGCCGTGGGTTGC 40156 29 100.0 32 ............................. CCCGGCTTGCTTAAGCACCGCGATAGCTTCGG 40095 29 100.0 32 ............................. GAGTGAGATGGAAGTCGATTCGCTCACGTCCA 40034 29 100.0 32 ............................. CGATAACCTCCTGCGCCCGATTCCACAAGTTC 39973 29 100.0 32 ............................. CGGAGGAAGGGGATGATGACTACCACGACGGA 39912 29 100.0 32 ............................. CGCACCGGGGCACCCGCCGCAATTTACCCCGG 39851 29 100.0 32 ............................. CTACAGACCGAAGAACAGCTGGCCCTGCTCAT 39790 29 96.6 32 ............................T CGCCGTGATCAAGCATAGGAAGGGGAAGGATG 39729 29 100.0 32 ............................. GGTCGCACTTCGCCGGTGCCCGGTTCTTCTGG 39668 29 100.0 32 ............................. TTTCTCTCTGATACGAAAACCCCCGGCGGATT 39607 29 96.6 32 ............................T ATGCCCAGACCACCATTTCTCGCCAGCTATCC 39546 29 100.0 32 ............................. CCGGATGAAATCAGGGCGTTAGTTACCGCCTG 39485 29 100.0 32 ............................. CTGTGCCGTGGTGTGCGTATGCGGAGCGGGTG 39424 29 100.0 32 ............................. AAAAGAAGGAGGACAAAATGGCAACACTATTT 39363 29 100.0 32 ............................. CACCCGCAAGGCCAAAATCAGTACCCCAGTGG 39302 29 96.6 32 ............................G ACTCGGCAGGATTAGAGTCCAGGAGCCGAGCC 39241 29 100.0 32 ............................. ACCCGTGGCGAACGCAATAAGCGTGATAGAGC 39180 29 96.6 32 ............................T TCGCCGCGCCAGGTGAGGCGGCAAAGGAACTA 39119 29 100.0 32 ............................. GAGTGTGACCAATGCCTAACGCTTTTATTTGT 39058 29 100.0 32 ............................. GTGATTGTGCCTCCAATAGTCACAAATTTGGA 38997 29 100.0 32 ............................. GGCGGCCTTATCGATACTAAGGGTAAGACTCA 38936 29 100.0 32 ............................. ACGTCACGCGGCATAAAGCCTATTTCGTCCAA 38875 29 96.6 33 ............................G TGCACGGTTTGCCACGCGGCATGGGGCTAGTAG 38813 29 100.0 32 ............................. TTCCACCCGTAATAAGGTAGCGGGCTAGTCTC 38752 29 96.6 32 ............................G CCGGAGACCCGCGTAGCTGGCGTGCCGCCGCT 38691 29 93.1 0 ......................A....G. | ========== ====== ====== ====== ============================= ================================= ================== 48 29 99.1 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : GTGGACAATAGCGCCGAGTCAATCGATGTAGAGCTGCTTTTGTGGAACGAACTTGAAAATATTGCGGCTGGTACTAATTGGTCAGACTTTGATCGGAGTTCTCCATGATGGTGCTCGTCGTTACTGCATGTCCCGCCGGCCTGCGCGGTGACCTTACTAAGTGGTTACTTGAGATTTCACCTGGGGTGTTTGTGGGTCGTCCATCAGGGCGCATTCGTGATCTGTTGTGGGAACGTTGCGTAAGTTTGTGCAAAGATGGCCGCGCTATTTTGGTTTTTAGCTCCGATAATGAGCAGGGGTTGGATTTTCGCGTTCATCGCCATGAGTGGGAGCCTGTGGATTTTGATGGTGTCACCCTCATGCGAAGAACCACTGCGCCATCAAAAGCTCAACGCCGTACCGGCTGGAGTGCTGCCCGAAATGCTCGCCGACACTGACCGTTACACCATAAGTCGGATCTGCTAGCCTCGTTTTTGGCTCTTCCACGCTGGTCAGTAAGT # Right flank : TTCCATTCTGCTGTGGAAGGTACAGAAAGAAAGTCTGACCTGTGAAACGTGGGGATAAGATTTTTCTGTTAAGAAATACCCGTTTGCCCCACAGTTTTCCGCGGATTTGGAAGAGTGTTTTCTGCGGAACGTAGTTTTTAAAATCGGACCACACGGTCCCTACATCCTCATCACAAGATGCGAGCAATCCTCATTTACGCTTTTTCGCAGAGGAAGCGGATGACCTGGACGTACTCGAGTCTGTTGGAAGAAATGCAACATGGTGCTGGAGTGAAACCCTATACAGCGTCGAAGCGACGTTGGTTATCTTCGCATACATTGATGACGTCCATGTTGCTACTGGGCCAGTGGAAGATCATTGCTCTAGATCTTGAATTGAGTCACCGAGCGCTGCGCGAGGCGGGGTTGTGAGGATTAGCGGTCGGATGCTCAGTGTGGTTTTAGTAAATGTATTTATCTGCCTTGAAAGTTTGAGCCGTCCCAACTTTTAACCGCCAGGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 22176-19462 **** Predicted by CRISPRDetect 2.4 *** >NZ_LTBF01000003.1 Corynebacterium striatum strain 2230 lasergene_15_len_T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 22175 29 96.6 32 ............................G CAGTCGTGCGGCCCATTCGTTGGCTTGTCGTT 22114 29 100.0 32 ............................. GCTGCACAATCGCGATGTATCCCATCGAGTTG 22053 29 96.6 32 ............................G GCCAGGATATTGCTTGGAAATGGATTAATGAA 21992 29 100.0 32 ............................. CATCCAGCGGTTAGATCGTGAAGTAGGGGAGC 21931 29 100.0 32 ............................. GGGAAAGTCGGTAATCATCGCGTAACTGATTA 21870 29 96.6 32 ............................A AGGACGGGGAACACAAGCTCAAATGGGCTTGG 21809 29 100.0 32 ............................. CTGCGCGGTCAGGGGCTTGTGGTTAGAGTTTT 21748 29 100.0 32 ............................. AAATCAAAGGATACATGATGGCATCCATCAAA 21687 29 100.0 32 ............................. TCGAAGTCACACAACACCTACTCCGAACTTGG 21626 29 100.0 32 ............................. GAGCGGCGCTGACATAAATTTTTGCCGTGTTA 21565 29 100.0 32 ............................. AGCAATGTGCAACTTTAGGGGTTGGCGTTCCC 21504 29 100.0 32 ............................. CTACCAACCGCGCTCCATCAGCTTCCCAGAGC 21443 29 100.0 32 ............................. CAAGCCCCGCCGCCGCAACAAGTACGAATCAT 21382 29 100.0 32 ............................. CACCGCACAGAACACCCTCGACCATGTGATCC 21321 29 100.0 32 ............................. GACCCGTTGTTAATATCCGCGACGGGGGTTGG 21260 29 100.0 32 ............................. TGGTTGCGAGGAATTCCATCTTGGAGCACTTC 21199 29 100.0 32 ............................. GTCTCATCTTCACCTTCCCAGGTGATATTCGC 21138 29 96.6 32 ............................G GGCAGCCCTCCAACCAGGTTTCCGGATCAATA 21077 29 100.0 32 ............................. GCCTACCGAGGCACGCGGGAGGAATTGCGTGC 21016 29 100.0 32 ............................. ACCGCCGCCCACGCTACGCGATGAGGTGGCGA 20955 29 100.0 32 ............................. ACGGGCCTGCAGCTCACCCTTCAGCGCTTCGG 20894 29 100.0 32 ............................. GAGTGAGATGGAAGTCGATTCGCTCACGTCCA 20833 29 100.0 32 ............................. CGATAACCTCCTGCGCCCGATTCCACAAGTTC 20772 29 100.0 32 ............................. CGGAGGAAGGGGATGATGACTACCACGACGGA 20711 29 100.0 32 ............................. CGCACCGGGGCACCCGCCGCAATTTACCCCGG 20650 29 100.0 32 ............................. CTACAGACCGAAGAACAGCTGGCCCTGCTCAT 20589 29 96.6 32 ............................T CGCCGTGATCAAGCATAGGAAGGGGAAGGATG 20528 29 100.0 32 ............................. GGTCGCACTTCGCCGGTGCCCGGTTCTTCTGG 20467 29 100.0 32 ............................. TTTCTCTCTGATACGAAAACCCCCGGCGGATT 20406 29 96.6 32 ............................T ATGCCCAGACCACCATTTCTCGCCAGCTATCC 20345 29 100.0 32 ............................. CCGGATGAAATCAGGGCGTTAGTTACCGCCTG 20284 29 100.0 32 ............................. CTGTGCCGTGGTGTGCGTATGCGGAGCGGGTG 20223 29 100.0 32 ............................. AAAAGAAGGAGGACAAAATGGCAACACTATTT 20162 29 100.0 32 ............................. CACCCGCAAGGCCAAAATCAGTACCCCAGTGG 20101 29 96.6 32 ............................G ACTCGGCAGGATTAGAGTCCAGGAGCCGAGCC 20040 29 100.0 32 ............................. ACCCGTGGCGAACGCAATAAGCGTGATAGAGC 19979 29 96.6 32 ............................T TCGCCGCGCCAGGTGAGGCGGCAAAGGAACTA 19918 29 100.0 32 ............................. GAGTGTGACCAATGCCTAACGCTTTTATTTGT 19857 29 100.0 32 ............................. GTGATTGTGCCTCCAATAGTCACAAATTTGGA 19796 29 100.0 32 ............................. GGCGGCCTTATCGATACTAAGGGTAAGACTCA 19735 29 100.0 32 ............................. ACGTCACGCGGCATAAAGCCTATTTCGTCCAA 19674 29 96.6 33 ............................G TGCACGGTTTGCCACGCGGCATGGGGCTAGTAG 19612 29 100.0 32 ............................. TTCCACCCGTAATAAGGTAGCGGGCTAGTCTC 19551 29 96.6 32 ............................G CCGGAGACCCGCGTAGCTGGCGTGCCGCCGCT 19490 29 93.1 0 ......................A....G. | ========== ====== ====== ====== ============================= ================================= ================== 45 29 99.1 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : GTGGACAATAGCGCCGAGTCAATCGATGTAGAGCTGCTTTTGTGGAACGAACTTGAAAATATTGCGGCTGGTACTAATTGGTCAGACTTTGATCGGAGTTCTCCATGATGGTGCTCGTCGTTACTGCATGTCCCGCCGGCCTGCGCGGTGACCTTACTAAGTGGTTACTTGAGATTTCACCTGGGGTGTTTGTGGGTCGTCCATCAGGGCGCATTCGTGATCTGTTGTGGGAACGTTGCGTAAGTTTGTGCAAAGATGGCCGCGCTATTTTGGTTTTTAGCTCCGATAATGAGCAGGGGTTGGATTTTCGCGTTCATCGCCATGAGTGGGAGCCTGTGGATTTTGATGGTGTCACCCTCATGCGAAGAACCACTGCGCCATCAAAAGCTCAACGCCGTACCGGCTGGAGTGCTGCCCGAAATGCTCGCCGACACTGACCGTTACACCATAAGTCGGATCTGCTAGCCTCGTTTTTGGCTCTTCCACGCTGGTCAGTAAGT # Right flank : TTCCATTCTGCTGTGGAAGGTACAGAAAGAAAGTCTGACCTGTGAAACGTGGGGATAAGATTTTTCTGTTAAGAAATACCCGTTTGCCCCACAGTTTTCCGCGGATTTGGAAGAGTGTTTTCTGCGGAACGTAGTTTTTAAAATCGGACCACACGGTCCCTACATCCTCATCACAAGATGCGAGCAATCCTCATTTACGCTTTTTCGCAGAGGAAGCGGATGACCTGGACGTACTCGAGTCTGTTGGAAGAAATGCAACATGGTGCTGGAGTGAAACCCTATACAGCGTCGAAGCGACGTTGGTTATCTTCGCATACATTGATGACGTCCATGTTGCTACTGGGCCAGTGGAAGATCATTGCTCTAGATCTTGAATTGAGTCACCGAGCGCTGCGCGAGGCGGGGTTGTGAGGATTAGCGGTCGGATGCTCAGTGTGGTTTTAGTAAATGTATTTATCTGCCTTGAAAGTTTGAGCCGTCCCAACTTTTAACCGCCAGGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //