Array 1 75170-72896 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRJL01000005.1 Bacteroides uniformis strain AM18-14LB AM18-14LB.Scaf5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 75169 47 93.6 30 ....................GCT........................ AAGCCGTCCGCATCGTACAGTCTCACGGCA 75092 47 100.0 30 ............................................... AATCACATTACTCATCACTGTCCTATTTTT 75015 47 100.0 30 ............................................... AACATTAGGAATAAGTCCAGAACCTTGTTC 74938 47 100.0 30 ............................................... TCAATACTACGAGAACGAGCACGCTCACGA 74861 47 100.0 30 ............................................... TCAACAAGACGATTGTAATCGTAACGACTC 74784 47 100.0 30 ............................................... CTGACAAGCAAGGTCGGGCGTTGTCCGCTA 74707 47 100.0 30 ............................................... ACAAGATTTAGTAAGGTACACCATCACGGG 74630 47 100.0 30 ............................................... TATCGTAGCGAAAGGAATAGTTACGAATCT 74553 47 100.0 30 ............................................... GTTTGTCATGCACGAAACCATTTTATTGCA 74476 47 100.0 30 ............................................... TTCCCTTGTAAATTCCTAATAATTAGTGTG 74399 47 100.0 30 ............................................... GCCTTGCAACCAGGCAATCAACCGTTATCT 74322 47 100.0 29 ............................................... TTCTTCTCCCCATAGTCAATGTCAAGCGC 74246 47 100.0 29 ............................................... ATTATAGATATGAAATTCAGTGAAGTATA 74170 47 100.0 30 ............................................... GTATCCGACTGCCGTAACAGTGAGCGGTGG 74093 47 100.0 30 ............................................... TTTGTTCGATGTCCTTGTAGAGGAAATATT 74016 47 100.0 30 ............................................... TGGTCTTAATTAAATAAGGATTATTTCCAG 73939 47 100.0 30 ............................................... TCTATATAAGCGTCAAGGTCTGTTAAATCC 73862 47 100.0 30 ............................................... GTCTTGTATTCAGCATAACGCGGCGTATAG 73785 47 100.0 30 ............................................... AGAGGGCTTGCGTGTCCGCCAGTCGGCAGC 73708 47 100.0 30 ............................................... CTGTTGGTCATGTAGTCTACCGACTGACCC 73631 47 100.0 30 ............................................... CTTCTTCTTTGAGACGCTCAATTTGGTTTG 73554 47 100.0 29 ............................................... ATCTTTGTGGTATGAAACGAAGTATCTGA 73478 47 100.0 30 ............................................... CAACCCCGCCGGAATAGGAACCGCCATTGC 73401 47 100.0 30 ............................................... TTACTTCATTAATTTTGTTTTATAGAATAC 73324 47 100.0 29 ............................................... GAGTGTATTAACTTAGAAAACAATTAAAC 73248 47 100.0 30 ............................................... TCGCGGTAGCAATTTTAAAAATCATTTTTC 73171 47 100.0 29 ............................................... GAGATAAAACCAGTAGTTAAGCTCGCCTA 73095 47 100.0 29 ............................................... GTCCTCGTAGACGAAATTAACGAACTTCC 73019 47 100.0 30 ............................................... ACGTCCGCAAGAAGGAACTTATCGCGACCA 72942 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 30 47 99.8 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TGTTCTGTATGGCAGGGCCTGCTTTCCATATTTCGTCCAGAAACACGACATCGGCTGTGGGCAGATAGCCGTCGATGGCACGTTCGTACTTATCGGATTCTTTCAGCCGGCTGATGCTGACGGGACCGAATATCTCGTCGGGTGTAGAGAATCGGGACATCAGGTATTCGAAGGCACGGGCATCTGTAAAAGCAGACTTTAGCCGCCTGGCTACCATTGACTTGGCTACTCCCGGAGGCCCCAGGAGCAGGATGCTCTCACCTGCCAGGGCTGCCAGCAGGGAGAGGTTTATTTCGGTTTCTTTTTCGTATACTCCCCGGTTCATTTCGGAAAGGAGGAGGCGGATGCGTTGGATCATTTCCACAATATGATTTATTTATAGTCAGTACTCATGTATAAAGAAAAGTGTGTAAAGATACCAAATAGTAGCGAAATCAGAGAGATTCTTATTAAGATTCACTATCTTTGGAAAACAAATACACACAGACACGCACACACAC # Right flank : TGATTACAAGTAACAATCTAATATTCAAACGATTACACATAGTATTAGAATATAAAAAAAGAATGCTGCTTCTAAAAAAATCCCGCCATTGCGCGGGATTTTTTTAGAATAATTCTAATTGTTGTCCAGGCGTATTCACATCCACAGTCTTTTTCCCATAAAAAAGTGCTATATTTCCAAATTGCTTGTCCGTAATGCACATAATTCCGACACTTCCATAGTCCGGTAAGAAAGATTTAACTCTTTTTATATGTACCTCCGCATTCTCACAACTCGCACAATGACGAACATATATAGAGAACTGGAACATCGTAAATCCATCCTTTTGCAGATTTTTTCTAAATTCCGCATACGCCTTTTTATCCTTCTTGGTTTCGGTAGGCAAATCAAACAACACTAATACCCACATAATGCGATATTCACTAAACCGGTCCATCACATCTCTGGATAGGATATTTTACGCAACTCACCACTGAAACATTTATACAGAGAAGCCGTAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //