Array 1 312213-314708 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSJD01000001.1 Bacteroides caccae strain AM31-16AC AM31-16AC.Scaf1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 312213 47 74.5 30 TAAA..CC.ATA..A......G....T.................... AGAAAGGAAGAATTTTACAGGAAATGCACT 312290 47 97.9 30 ..............C................................ GAAAAACTCCTTATTCAGTCCTTTCCCGGT 312367 47 100.0 29 ............................................... CGTTAACAGGGATGCTTGTATGGATAAGG 312443 47 100.0 29 ............................................... CGGACAAGCATATAAAGGCCCGCCGGACG 312519 47 100.0 30 ............................................... CCAACAATCGGAAGGCGTGCGTGGATAAGG 312596 47 100.0 30 ............................................... GCCGAAAGCTTCCCTTCCCTTGTAGCGCTT 312673 47 100.0 29 ............................................... GCATGGATTGACTATATGAGTAACTATAA 312749 47 100.0 29 ............................................... GATTTTGCCAAATTTGAGAGCGCAATAAA 312825 47 100.0 29 ............................................... AAAAAAATCAGTGCCAGAACCCGAGGATT 312901 47 100.0 29 ............................................... AATTTTAAATTGTTAATAATATAAATAAA 312977 47 100.0 30 ............................................... GAGAATCAAGTAACATGCGTACGTGAAGTT 313054 47 100.0 30 ............................................... ATAGCGGACACGCTAAAGGACTACGGGCTG 313131 47 100.0 30 ............................................... ACGTGGACAGGTAAACGGACTATTACAGAT 313208 47 100.0 30 ............................................... ATGGATCAAGTCAATAAAAATTGGGAAACT 313285 47 100.0 30 ............................................... ATCGAAATTTAAAGACCATGAATGATCTAC 313362 47 100.0 29 ............................................... TGGGGTGTAGGTTTAGATTCACTAGTGAA 313438 47 100.0 30 ............................................... CGGAGCAGGTAGAATATATCCAACAAAAGG 313515 47 100.0 30 ............................................... TACAGGCCATTAATGTACAAGGAGCAGATT 313592 47 100.0 29 ............................................... ACGTACTTAACCGGAAGGCTTCCGGAGCG 313668 47 100.0 30 ............................................... AGTGTAGCGCAACAATGGAGTAAATTGCAA 313745 47 100.0 29 ............................................... TGTTAGTATTGGATGAACTAAGCAGTTTC 313821 47 100.0 29 ............................................... CTAACAGTGCCAGACATGACATCATAGTA 313897 47 100.0 30 ............................................... TGTCGGCGAAGTTGATAAGGTACAATTCCC 313974 47 100.0 29 ............................................... TTGTCAGATGCAATTGCCCCGGCGCCTAT 314050 47 100.0 30 ............................................... GCATTACGCCATAATAAATGTAAGGGGACC 314127 47 100.0 29 ............................................... GACAAAGAAGAAGTATGTGAGGCAGAGTG 314203 47 100.0 29 ............................................... TCTATCAGTGAAATAACAAATTTCTTTGA 314279 47 100.0 30 ............................................... TGAGTACTACCAGATTGAAGATTCGTATTA 314356 47 100.0 30 ............................................... ATTAATTTGTGATATTACATGGGCTGGTAA 314433 47 100.0 29 ............................................... ACGGAATAATCCACCACAACGCCAAAGTG 314509 47 100.0 30 ............................................... ATATACACAAGGACGAAGGATACATGAACG 314586 47 100.0 29 ............................................... GAATACTTAATACAACGGTAACAGAATGA 314662 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 33 47 99.2 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Left flank : GCTTCGCACCTCTTTACTCTTTGAAAGAGCAAATCATGCAGAGTGACAACAGTCTGATTCAACAGACAGTGGGTACCGCTTTTGATATGTGGCAGAAATTCGCGTTCACTATCGTATTGATTTCCTCCTTCATCCTACTGTATCAGAAAGCTAAGTTTCAAAAAGCTGTTTCCAGCCTCCGCTTTTACGGCAAGATGAGTCTGACAAACTATATTTCCCAATCTGTTCTGGGTGCCATTATCTATTTCCCATTCGGATTTTATCTGGCTCCTTACTGCGGATATACTCTAAGCTTGATTATAGGTATTGTTCTTTGTATCTTACAGGTTCAGTTCTGTAAATGGTGGCTGTCCGGACATAAACAGGGACCATTGGAGACGATATGGCATAAATGGACTTGGATAGGGAGCAAATAATGCAAAAATGTATGAATTGAATAATTTGAGCTATAGAACAACATATTATGGGATTTATACGGGACAATTAGGTTTTGTTCTGTA # Right flank : CACAATCGCCATTAGCCACTGTATTTCAATAAGTTAGATCACAATATAGAAAAAGAAAATGAGCTGTAAATTCATTAAAAAATCCCGTAGTCTTACGGGATTTTTTATTCAAAATAACTCTAATTGTTGTCCTGGTGTATTAACAGATAATATTTTCTTCCCATAAAAGAGTTCAATATTCTCAAATTGCTTATCAGTTATGCACATTATTCCAACCTGACCATATTCTGGCAAAAATGATTTTATTCTTTTTATATGAACCTCAGCATTCTCACTACTTGCACAATGACGAACATAAATAGAAAATTGAAACATAGTAAAACCATCTTTCTGTAAATTCTTTCTAAAATCGATATAAGCCTTTTTATCTTTTTTAGTTTCTGTTGGCAAGTCAAAAAGCACTAATATCCACATAATACGATATTCACTAAAACGATCCATTACTTCTCAGGATAAATAATACGACGAAGCTCTCCAGTAAAACATTTATAAAGTGAAGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //