Array 1 32703-31677 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCME01000003.1 Lactobacillus melliventris strain Dan2 NODE_3_length_276144_cov_24.618, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 32702 36 100.0 30 .................................... CCAAGTATCATTGGGTGCATGAATATTGGG 32636 36 100.0 30 .................................... TATTAGGCTAAGAATACAGGTTCCAATCTT 32570 36 100.0 30 .................................... TAAATTTATACAATTTTGGGAAAATTTTGC 32504 36 100.0 30 .................................... CAAAACCTCCCACTAAGTAATAACAATAGT 32438 36 100.0 30 .................................... CTGTTAGATCAGCTAAGAAGTAGAGCAGTG 32372 36 100.0 30 .................................... TAATATTGATCTTTATTTTGCTTTCCCTCT 32306 36 100.0 30 .................................... AAATTAGCTTGACACCTTACCCAGCATATA 32240 36 97.2 30 ...................................A AGTAGAGCAGGCACACAGACTATCCACCTA 32174 36 100.0 30 .................................... TGGCTACTACAGCAGGCTTTGCGATTGGTG 32108 36 100.0 30 .................................... TGCCAGTGTGCCATATTTGGCTTCTATTTT 32042 36 100.0 30 .................................... AGATGATAATGACCTTAAAGCAAACATGCT 31976 36 100.0 30 .................................... GACTATCAGGAGTATCATAGATTTCAACTT 31910 36 97.2 30 ........................T........... ACACGAAGTTCAAACACTTTGAAGAGGTAA 31844 36 100.0 30 .................................... GTGCCTTCTCAATGAAGGAAACGACGACGG 31778 36 100.0 30 .................................... TAAGGTGTTTCTTAATCCAGGCAATAGCTT 31712 36 72.2 0 ..............A...........CAGCCCA.GT | ========== ====== ====== ====== ==================================== ============================== ================== 16 36 97.9 30 GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Left flank : ATCCATTACTTGGTGGCGATATCACTAAAAAGTATATGCCTCATATTGTGAACAATTATCTGAAAGACTTAGATGAAGAAAATCGCAACAAAATGATTAAATCATTTTATAGTTTAGAGTCAATTTTACAGGATTCACTTTTACTTGAAGACTTACCTTTAGCAATTAATTTTGATGAAGATTTAAAAAAGCTACTTAAATTAACGGAGATACATTTGGATAAATCAATGTTGCTCAGTCCGTATGGTATAATAGAAACAGTTTTAAAAATTCACCAGACGTGTAATTTAAAATCAATTCCTGTTATTTGTAATGTAGCTCATTACTTGGAAGAACAGGAATGGCAAGAGCTAGCTAGTCTTGTCAAAGAAATGAATTTGATTTTGGTTGTAATTGAATTCACGACAAAAGAAAATTTAACAATACCTAAAGACGTACCTTTTTATTTTATTGATAAGGATCTAATCGATTGGTATTAACAACAATATTAAAATCAGATT # Right flank : ATTTACTACCACTATGAATGCAACTATATAAAAATGGATAAAGTAACAAGCATTTTCTCATAGACTATTTTATAAAGATGACAGAAACTTATTGTCAGTAAACCTAGTCTTTATTATTTGAACTAGAATGAAATTTATATATTTTTCTACTCTGTGTCAAATCAAGGCAAGATTAACAATCATCTAGTTGACTATTACTACAAATTAAAAGAGCCACCCTATTCCAAAAAGGATTTGGTAGCTCAAATAGCCTACGTTAACCATTTAAATCGTACAATCATGCATTTGGCTCACATAAATCAAATCTATGATTATCAACAAGCTGTACATTAATAAGGGTTATCTGTTAAACAAATATTTAACTTGTAAAAAGGCGCCTTTTTAAAGTATCTTTAGTATATCCATTTTTAAATCTTTTTGATACTTGAAATTCTATAAGAAATCATATTGATAATGCAAAGATAAATAGTAACAGATAATAAATCTGCTAATTAATCACA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.40,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //