Array 1 133950-134704 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAEX010000001.1 Streptococcus sp. WB01_FAA12 Contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================================== ================== 133950 29 100.0 37 ............................. TTATCTTCGACAATTCCAGTTCTGTTGCAGACTTCAC 134016 29 100.0 46 ............................. GTAAGAGGATTCACTCCCTTGATAATCTGAGCCACATCAGACGTCA 134091 29 100.0 46 ............................. ATATTAGTGTTCAACCATTGACCATCTTTGGTTTGAGTGGTCAACT 134166 29 93.1 38 ...C...........A............. TTAACCACCAAGTCCTTCGTATCACCAAAAATGAAATC 134233 29 96.6 52 ...C......................... ACACTTGCTTTCGCAGTTTCCACTTTCTTCTCTGCATTTTGGATGGCTTCAG 134314 29 96.6 46 ..........G.................. TTTATAACCCCAGTTTTAGGGGGTGCTATTTCTCGGCCCGCTTCAA 134389 29 96.6 41 ..T.......................... CTTCTTCGGCTTAGGGATTTCGATGTTTTCTTTCGGAACCC 134459 29 96.6 46 ...............A............. TCAACGTTTTGAACTTTCAATGGTTTGTTGAAGAAATCGTAGTCGA 134534 29 96.6 42 ...........................G. CGTCAATTCTGATTTGACTGCAATTCGTTCTTCCATTGGAAC 134605 29 100.0 42 ............................. TTTATTTAGAATACCTTGAAGATATTCTAGCTCCTCTTGATC 134676 29 82.8 0 ..T......................GTTG | ========== ====== ====== ====== ============================= ==================================================== ================== 11 29 96.3 44 GTAATACCTTACCTATAAGGAATTGAGAC # Left flank : TACGCCTCATAGTGACATCATCAAGAATCCTATTCCAATCAACTGTCTGAAGGTTAAGCCTGGAATCTCTTTTGAATTTGGCTTTTATCTGAAAGATTGTCAGCTTTCGGATGGAGTTCAAATTACGGTTAAAGAAAAAATAGAGTTATTTAAAACTATCTTGACTGATGTAGGCATTGGCGCTAAAACGAATGTTGGTTTCGGACAGTTAGAGTAGTAGTGGTCCATCGACAAGGGTATTTACAAATCGTATCTGAGGGAGTCACGCAACTCACATAGCTCAAAAAGGTATAGAGGAGCTTGTTCATATTAAGGAGCCTGAATATAAGAACGCATTTACAAAGAGCTTAGAAACGAGTGAAGTCAGCTATTGTACAGGAGTTCAATCTTAGTTGGCAAGGGCGCTAGGACAAAAAAGATCGATCGACTTTTTTCATTGAAATCTTGAAAAAAGCCCTGTTTTTTGATACAATCAATCTAGAAACAGCGAAAATGCTGTT # Right flank : GCTTCAACTGAAAAAACTTGCGAGAGCAATTTTTTTGTGGTATATTGGAAGTGCTTTCATGTTGAATGTCTTTATCGGAGGTTGTTTATGTCTGAGAGTCAATCTGTATATAGTCACCATATCTTTGTTTTGCCCTTTGCGGCCAAGGGGCTGGAGTCTTTTCCGAAGTCTTCCAATTGGAAGAAACTCAGCCAAGATGCCAATGAACTCCCCTATCTGAACGTAGAAGATGGTGAAAAAAGCGAGCGATTAAAGTACGCTTATCGCCGATATTTTAATAAAGAAGCAGAGGAGCTGATTTTCCGCAATCCTGAGCTAGTCACAAACTATGCTTATACTGGCTTAGAAAAAGGTGATGTGTATCGGATTTCTTATTATAATCAAATCGACAAACTTGAGTGTTATGACCTGACGCTTGACTATATCATGCTTCGTTATTTACCAAATTTAGAAGCAGGTTTCCTGATTTTCTCAATGGAAAATCGTCTCTATGATAAATT # Questionable array : NO Score: 2.64 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.03, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAATACCTTACCTATAAGGAATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 1661-41 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAEX010000012.1 Streptococcus sp. WB01_FAA12 Contig_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1660 36 100.0 30 .................................... TCATATACCAATAAATGGCAAATACAATTA 1594 36 100.0 30 .................................... AATGCCTGGTACTTCTTGTTTGAACATATA 1528 36 100.0 30 .................................... TATAAAGCACGTCAAAGACAAAAGCGTAGT 1462 36 100.0 30 .................................... TGGAAGAGAAGCGTCCGATTACCGTCTACA 1396 36 100.0 30 .................................... CAACAGTCGAAGATTTGAAAAAATTGTGGC 1330 36 100.0 30 .................................... CAGAATCAGCCTATCAGCGTGCAACAAATT 1264 36 100.0 30 .................................... GTTCACAGAGATAGAGCTGTATGATATTTA 1198 36 100.0 30 .................................... TTTATACTTGTGATTTTCGTCTATTGTTCT 1132 36 100.0 30 .................................... AGGTATTTAACTTGTGCAGGCACGTTGTCA 1066 36 100.0 30 .................................... TCACGTTCGACGTTTACATTTTCGACGTCA 1000 36 100.0 30 .................................... ATATTCTGGACAGCTTGGAGAGTGGCGACT 934 36 100.0 30 .................................... TGTACCAGATGCAACCGCGACGGGTATCGC 868 36 100.0 30 .................................... TCTATCCTTTACCGCGGACACGGAAAACAA 802 36 100.0 30 .................................... TAGCGCTTTCGTTCTAGGTTTTAATTCATC 736 36 100.0 30 .................................... TGACGGTAATAGCTTTATCCGTACTAATAA 670 36 100.0 30 .................................... AGGGCATTCATGTGAGATTGATTTGCTCTT 604 36 100.0 30 .................................... AGAAAATAATATAATCATCTTCTCCTGTTT 538 36 100.0 30 .................................... TGATTAAATCTTGGATAATGCTAATGAGCA 472 36 100.0 30 .................................... TAGTATTTGACAATTTAACTGGTAGATTCT 406 36 100.0 30 .................................... GGAGAATTAAGATGAAATATATTGTAGTAT 340 36 100.0 30 .................................... CCAATGGACGTCACTCAGAACGACAGTGGA 274 36 100.0 30 .................................... GCAGGTCCTGGATTGCAACAAGCAGGGACT 208 36 100.0 30 .................................... CTGAGTTCTCAACTCATTTAGACATGCTAT 142 36 100.0 30 .................................... TGTTGCCAATTTCATAGTATTTGTATTCCT 76 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 100.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTCAATGACAAACCGGAAGTCAAGTCCATGATTGAAAAGTTGGTTGCTACGATTACAGAATTGCTAGCATTTGAGTGCTTGGAAAACGAATTGGATCTGGAGTACGACGAAATCACCATTCTAGAGTTGATTGATGCGCTAGGGGTCAAAGTTGAAACTCTAAGTGATACACCTTTTGAAAAGATGCTAGAAATTGTTCAAGTTTTTAAATATCTTTCCAAAAAGAAACTCCTTGTTTTCATCAATGCATCCGCCTATCTATCAAAGGATGAGTTGGTAAATCTGATAGAGTACATCCAACTAAATCAACTAAGGGTTTTATTTGTCGAACCTCGAAAAGTCTATGATTTTCCGCAGTATGTAATGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAACAATTGGAACCTGACGAGCTGAAGTCCGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : CCTGAATAATTACCAGATAACCAACCAAGGGGTTTTAGAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //