Array 1 1-148 **** Predicted by CRISPRDetect 2.4 *** >NZ_UICD01000004.1 Acinetobacter baylyi isolate AB93A21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1 28 100.0 32 ............................ AATCGTAAATTAGTGGGCGTGAATATGGAATT 61 28 100.0 32 ............................ AGAAGTATCAACAGATGATTTATTTTTAGATA 121 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : | # Right flank : | # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 31-178 **** Predicted by CRISPRDetect 2.4 *** >NZ_UICD01000005.1 Acinetobacter baylyi isolate AB93A21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 31 28 100.0 32 ............................ TTGAAGTTTTCCGCTTGATGTAGTCATACATC 91 28 100.0 32 ............................ AATTTGAGTAGTATTTTCTCCAAATGGATATT 151 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : CTGCAAATCATCATGAAGTGATTGAACAGAG # Right flank : AA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [31.7-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2410875-2409944 **** Predicted by CRISPRDetect 2.4 *** >NZ_UICD01000001.1 Acinetobacter baylyi isolate AB93A21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2410874 28 100.0 32 ............................ ATCACAACCAAAGCACCAGTGTTCAGCTCATC 2410814 28 100.0 32 ............................ ATCGTTGTTGGATAGCACAATCACAGGTTTAT 2410754 28 100.0 32 ............................ ATGATCGAAGCAGCGCAGGGAGATCAAAATGA 2410694 28 100.0 32 ............................ AAGATCAAGACGCTCAGCTTTACAGGCGAATC 2410634 28 100.0 32 ............................ TATTGCGTTTTATCTCGATGTTGCCCATGCAA 2410574 28 100.0 33 ............................ CGGTGGAGTTTGATAGCTATACGCCATTTATCG 2410513 28 100.0 33 ............................ GAAACCCATTATCCCAGTGAAAGGAGATGTTCC 2410452 28 100.0 32 ............................ AATTCAAAACCCAACTACGAACCTGTTGATCC 2410392 28 100.0 32 ............................ AAGAGAGCCAAGTGAGCACTTTATATATACGC 2410332 28 100.0 32 ............................ AGAAAAACACAACAGCTCAGGACTAGTCACAG 2410272 28 100.0 32 ............................ GCAACATAGCTAATCCCTTGCCAATTCTGGAA 2410212 28 100.0 32 ............................ AACTTCGCGCAACAAGCTACAGAACATTCACT 2410152 28 100.0 32 ............................ ATATCTTGGCACCACAATACCCTTTTGATTGC 2410092 28 96.4 32 .............T.............. CGAAGATTCGCGCCCCGAAGATCCGCGCCCCG 2410032 28 100.0 33 ............................ TGATTAGTACGTTGGTTACGTCGAACAGTGCAC 2409971 28 82.1 0 T............T..........ACT. | ========== ====== ====== ====== ============================ ================================= ================== 16 28 98.7 32 CTTAACTGCCGCACAGGCAGCTTAGAAA # Left flank : TATAACTAAAAAATGATTTGAGAATGGTTTCTCCGCTTAATTTTCCACTGGCAATTGGAGTAAGTACGCCAATCGTTAAAATAATGACACCAACATTTAGGCCATGTTGCTGTAAAAAAGGGAAAAATTCACTTAAAGGTGTAAGCTTAAAAACAATTAATACGCCTGCAGCAATAGTTACCGCCGCATTTTGGCTAAAAATACCACAAGCCAGTAAAACGAGTAGAACCAGTAAATTGACATCAAATTGAGACATGAGCATGGTATGAATAGTTAGTTTTGCAGGAATGATTATTGTATAACGATTTTACCAACACTTGAAAAAGAAAGACTTTTTACAGTAAATTGAATATCTATTATACTGGTTTACCCCAAAATTTTAGACTCTTTAAAAAATCAATTTAAATCAAATGCTTATATTTTGACTTAAAACTTTGGTTAAAAGTGAATTTGTTGATTTAAGTTTTTGATATTTAGAATATTTCTCAACAATATTTACT # Right flank : TTCAATCAATTGACTTAAAAAAATAAGTTACACTAGGATGTCTTTTTTATTCTGGATATCGATATGCTCTTGGAAAAAATGTTGCAGTCACAAGGTTTTGGTTCAAGAAAATACTGTCAGCAACTTATTAAGAACGGAGCAGTTTCGATACAAGATGAAATTCAAAAAGATCTAAAATATCGAATTCATGATTTAACTGATTTTAATTTTCAGGTTTTTGATCAAAATTACGTATATCGGGAAAAGGTATATATTATTTTAAATAAACCTAAAGGCTTTGAATGTTCTCATCAGCCACATCATCATCAAAGCGTATTCAGTTTACTGCCAGATTTATTAATTCAGCGCAATATTGCGGCTGTAGGGCGCTTGGATCAGGATACTACAGGGCTGTTGTTACTGACCGATGATGGACAATACCTACACGCGCTAACGCATCCCAAGAAGCATGTTCCAAAGGTATATCATGTGACTACGATTGATCCAATTACAGTTGATCA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTAACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2442936-2443684 **** Predicted by CRISPRDetect 2.4 *** >NZ_UICD01000001.1 Acinetobacter baylyi isolate AB93A21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2442936 28 100.0 32 ............................ ATCCAAGGCAAAACCGATACTGGTGCATTGTC 2442996 28 100.0 32 ............................ GTATGTGTCGAGTCTAACCCATTGTTTAGTAA 2443056 28 100.0 32 ............................ ATGTCGGTTTTTTGCAATAATGATCTCGGTGA 2443116 28 100.0 32 ............................ AGTGTGTTGTCTGCAACAAGAATGCGATCATT 2443176 28 100.0 32 ............................ GCTCATTGCGGAAGCGACACTTGAACAAGTCT 2443236 28 100.0 32 ............................ TTGCGCAGCAGTCTGTTCAGCAATCGCAATAA 2443296 28 100.0 32 ............................ CAAACCCAGCTGCACCTGGCGAATTGCGTTGG 2443356 28 96.4 32 ........................A... AAGCGAACACTATATGCAGTGCATGGGTGGGC 2443416 28 100.0 32 ............................ ACATGATGAATTTGAAGTCAAAGACGATCAGG 2443476 28 100.0 32 ............................ GTTCACACAAACTGATGGCAAACAGAACTCAA 2443536 28 100.0 32 ............................ TTTGCGCTCTTGCTGTTCTGATCAAAGACCTC 2443596 28 100.0 32 ............................ TATTTGATTAAACACGTCCCACAGCACGCAGC 2443656 28 92.9 0 ........................TC.. | T [2443677] ========== ====== ====== ====== ============================ ================================ ================== 13 28 99.2 32 CTTCACTACCGCACAGGTAGCTTAGAAA # Left flank : CCTAAATCATTAGGTGTAAATGCGATCTGCCGCTGAAGATTACTGATTTCAATCGTATCTGAGTCAATAAGGGTAATTTTGCCAACCCCAGCACGTGCAAGCAACTCAGCCGACGTACAGCCAATTCCACCCGCTCCAACAATCAAGACATTGGCAAATTTTAATTTTTCCTGAGCATCAATATCCCATCCATCCAGTAAAATTTGACGGCTATATAAATGCATTTCTGCATCGTTAAGCTCTAAATCCAGATTGTCCTGATTGTTCACTCGCGATTATCCCAATTTATGAATACTAAATTTATAACTATAATTATAAAGAGAAGCTTGTGTCGTAAGATGTTTTATTTTGACAAAAGTAAGCTTTTACCCCAATATTTTATTTACTCTTTAACAGCTAAATAAAATCAAAGACTTAGTTAAAGTCAAAATAAAATGGGTATTTCCATTTTATTTGCTTTAATGGATTGTTTATATTAATTATTTTTGCACTTTCTTACT # Right flank : AGTAACTTTTGATCAAACATTCAAAGCAGATTAAAATAGCCATTCAAACAACCAATCAAATATTACTTTGCTGATTCATATCAGCTTTTCTAATGATAGATAACAAAATTTTGAGTAAAAAAATGACTGCATGGCAACAACTTGGAATAGAACCCACTACAAATTTAAGAGAAATTAAAAAAGCATATGCTGTAAAGCTCAAGCAAATTGATCAAGATACTCAACCAGATCAGTTTATTGCATTGAGAGAAGCCCTTCAAACTGCCCAATATGAAGCAGAATATGGACTGTTTGATCAAGAAGAGAATCAGGATTCTCTATTTAATGATGATCAGACACTAAATTTTAATGAGCACACTGGATCCGCTCAAGAAAATGAAATCAATCAATCATCAGACACTTTATTTGAAGAAATTTATCTTGCCATTCAGCAACGTATCTTCGAGCAAGATATTCACTTCAATATTCGAGAAGCATTGCAAAAATTTGCTGATCATCTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTACCGCACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCACTACCGCACAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 2518453-2523580 **** Predicted by CRISPRDetect 2.4 *** >NZ_UICD01000001.1 Acinetobacter baylyi isolate AB93A21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2518453 28 100.0 32 ............................ TGACCGTTTAATTTTAATATTATTTCCAAGAT 2518513 28 100.0 32 ............................ GCCAGATAATGCGAAACTGGCCGTAGCGTTGG 2518573 28 100.0 32 ............................ ATCATCGTGTTGTCGGGATAGACAATCGGCTC 2518633 28 100.0 32 ............................ GGTATTGTTTGGTACGACACCCATTAGTTGTG 2518693 28 100.0 32 ............................ AGAATAAGCATGGCAATAGATTTTGAATATCG 2518753 28 100.0 32 ............................ ATCACCTTCGGTGGAAAGTACATAAATACTGA 2518813 28 100.0 32 ............................ CAGTTGTACAAGCAAATAGTTATGCTGATTTA 2518873 28 100.0 32 ............................ ATTTCTAACAAGCGTTAACTGAGTGCGTCCAA 2518933 28 100.0 32 ............................ ATCGACTTAGACATCCTATCTATTTCTGAATT 2518993 28 100.0 32 ............................ AGTATTTACTATTTAATCGCGTTCCTACGCCG 2519053 28 100.0 32 ............................ ACATTGTCCGCGACTTGCTCCGCGCTCGCGTC 2519113 28 100.0 32 ............................ AGCCCGATTGTTTTAATTGCGCTGCGGTATAC 2519173 28 100.0 32 ............................ GCAAGGTGTTGGGGCAATCAATCTTGAATATT 2519233 28 100.0 32 ............................ TAGTGACCGAATGGTCAAGCGCTGTATGGGCT 2519293 28 100.0 32 ............................ ACAATGGAAGTCAATGCGCCAGACTTCGAAGC 2519353 28 100.0 32 ............................ GTCAAATCATACCCTAGCGCTTCAAGTGCAAC 2519413 28 100.0 32 ............................ GTACCGTCGCTCAGCTTGACTTTATCGCCAAC 2519473 28 100.0 32 ............................ ATCTGGTTCTTGAGCGTGAGTATGTGAATTTA 2519533 28 100.0 32 ............................ CAAGCAAGATTTAATTTATCTGGCCAGTATTT 2519593 28 100.0 32 ............................ ACTTGCACTTCTTGTTCTGCTACTGGATCAGG 2519653 28 100.0 32 ............................ ACTTTAGGAAGTTTCATGACTATGACAATAAT 2519713 28 100.0 32 ............................ AGAGTGTTTTACCAGTGCCGATACCGCCTGTT 2519773 28 100.0 32 ............................ CTGACTGAGTTTTGTTTGTTACTGCTACGGTA 2519833 28 100.0 32 ............................ AATCATTAAGTATGTTGAAATAAATTATCAAT 2519893 28 100.0 32 ............................ ATGCACCGTGCAAACCATCCAGAAACTAAACA 2519953 28 100.0 32 ............................ TAGCTGATTTAATTGGACGTGCTTCAACAGCA 2520013 28 100.0 32 ............................ TAAACTTTGGACGGCGAAGGGGCTTTTCATAC 2520073 28 100.0 32 ............................ TATCGATGAATAGAGCATCAGAAATTAACGAC 2520133 28 100.0 32 ............................ GATTGAAGTCACTGGTAATCAGCCAGTTGGTC 2520193 28 100.0 32 ............................ AATCAATGAGCCAATCCGAACTATATGTGCTC 2520253 28 100.0 32 ............................ GAGATCAGAAACATCTTTCCAGTTCTGAACAG 2520313 28 100.0 32 ............................ ATAAAATCGTCTTTGGCGTCTACAGTTTCAAA 2520373 28 100.0 32 ............................ CGCATGATGCGTGCGCGTGATCCGAAGACGGC 2520433 28 100.0 32 ............................ GCAAATTCAGGCTGCGCTTAGCGAGGATGATG 2520493 28 100.0 32 ............................ ATCGGGATATTCAATACCTGGGCGAGCCTGAC 2520553 28 100.0 32 ............................ CTCATTGGTGGTCGGTACGGTATCGGCAAATG 2520613 28 100.0 32 ............................ ACCAGCGGACACTGATTTACGGATCTGATCGA 2520673 28 100.0 32 ............................ AGAATGTCTGGCTTGTCTGAGACATGGATCTC 2520733 28 100.0 32 ............................ AGGCGGTGAGACGTACAAGCTTAAATCGGTGA 2520793 28 100.0 32 ............................ AAGCTGCGAAAAAGGCAGGGATATCCAATGAC 2520853 28 100.0 32 ............................ TTGCTCAATAATATGGAGAAGGCAATCAACGT 2520913 28 100.0 32 ............................ TGCAGATCAGCCTAGCGATGCAAATCCAGAAT 2520973 28 100.0 32 ............................ CTTATCGAGACGTTCGCGGATCTGACGTGCAG 2521033 28 100.0 32 ............................ GATACGATCAGGAAACATCGCCTCAGCAATGT 2521093 28 100.0 32 ............................ AAGATCTTTAAGTTTTGGCACTAGATCGTTTG 2521153 28 100.0 32 ............................ TTTGCGAGATTTGAGGATCGATTGCTGTTTGT 2521213 28 100.0 32 ............................ AATCGCCTTGACGTCTGGCCGTGGCTCAAAAT 2521273 28 100.0 32 ............................ CTGAGTGGTCAGGGATAGGGGAATACTATGAC 2521333 28 100.0 32 ............................ TCGTTGATGTTCCTGCCGCTGGTTTTGCTGCA 2521393 28 100.0 32 ............................ ATCACAGGCCGCTGCCGAACCAGGTGCAACCA 2521453 28 100.0 32 ............................ ATAGGATATTACGCCATGACTCATAACGGCTG 2521513 28 100.0 32 ............................ ACGTCCACTTCGGCGGCGGCAGGCACCTTGCC 2521573 28 100.0 32 ............................ TTCTCTGATGCGAACCCCTTCACCATCAATAT 2521633 28 100.0 32 ............................ AAAATAGATATCTTCCATCGGTAGGTCGATAT 2521693 28 100.0 32 ............................ TTGGCACGCCCCCACTCGGTCTGCGTGCCTAA 2521753 28 100.0 32 ............................ ATCGCAGGCAAAGAGGCGAAAGCCCAGCGCGA 2521813 28 100.0 32 ............................ ACTGTCAACATCACACAAGCCGCAACCGCTGC 2521873 28 100.0 32 ............................ ACCATCGGAATTGCTTCCGTTTTGTGACGTCA 2521933 28 100.0 32 ............................ TGGCATGACGAATACAGCGTTCGTTATGCCCA 2521993 28 100.0 32 ............................ TCATGTGCATAAGTGAAAAAGGGGCTCTAAAG 2522053 28 100.0 32 ............................ AATCCGCCGTGGCAAGTTTGTCTATAACATGC 2522113 28 100.0 32 ............................ AGAATCCGAAGACACACGTTCTGATGACGCAG 2522173 28 100.0 32 ............................ ACACTACGTCAGCGACTGGTTGAGACACAAAG 2522233 28 100.0 32 ............................ CTACGCGGTTATCGGTGGCAATAGCCAAGGTC 2522293 28 100.0 32 ............................ TGAATGCCGTGCTGTATCTCTGATACGCGCTC 2522353 28 100.0 32 ............................ AAACTGCTATCTACTTGGTTTTGTTGCTGATT 2522413 28 100.0 32 ............................ TTAGTTATTGGTAGCCGTGAATCTGGTAAGTA 2522473 28 100.0 32 ............................ AAGTACATAACTTTGTTGATAAAAGTTAAGAC 2522533 28 100.0 32 ............................ TCTCCCGCATCCCCATTATCTAGTGAGAATTT 2522593 28 100.0 32 ............................ CGACCGATGCGGGTGGTATTCCACCAAAAGGC 2522653 28 100.0 32 ............................ AAGCTATACCGACAAAATAGGCATTAGACAAA 2522713 28 100.0 32 ............................ AGTTTGAATATGGTGCCTTCAGATACGCATAT 2522773 28 100.0 32 ............................ TGAGCCAGATCGACGTACCTATGTACAGGACT 2522833 28 100.0 32 ............................ GCGAGAGTGTATACTGTACCAAACGACCCCGC 2522893 28 100.0 32 ............................ CGTCATTCACGCAAACGAGCACGCGTTTTAAG 2522953 28 100.0 32 ............................ AATTTCGCTATTTTAGATATTGATTTTAATGG 2523013 28 100.0 32 ............................ GCTAGTGATGTCTTGAAAAGTCTCCCCCCCAT 2523073 28 100.0 32 ............................ CATCACATACTCTATATTCGTGAACAAACAAT 2523133 28 100.0 32 ............................ TTCACGCCAAAACGCCTGTGTTGTGCCATCTG 2523193 28 100.0 32 ............................ CTATTCAATCACCGAGAGTACGCGCGATATGC 2523253 28 100.0 32 ............................ AATATGTTTTGGTATGGTGATTTCTCATCGAC 2523313 28 100.0 32 ............................ TTGCTCATAAGGGTTGGATGTGACTGTTGAAG 2523373 28 100.0 32 ............................ AGTCAGCACAAAACAAAACCTAAATTTATGGC 2523433 28 100.0 32 ............................ ACACGGTGAAGCGCGTACTGAAGGCGACGGCC 2523493 28 100.0 32 ............................ ATCCCTATATTCAAATATAGCTATTGGAAATT 2523553 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 86 28 100.0 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAGCACTGTATAAAGAATTGGCCAAAGGATTTAATATTGACTTTAAACGAGATGAAGGCAAAAACTCACATGATAGTCTTACCGATATTGCGAATAACTACTTAGATCATGGAAATTACATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGTATGGGAATTAGTTTTGCCTTACCCATCTTGCATGGTAAAACACGCCGTGGAGGTTTAGTGTTTGACCTTGCCGATTTAGTTAAAGATGCTTTTGTAATGCCAACTGCTTTCATATGTGCATCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAACTTATAGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGCAATAAAATTAAATAAAATCATACAATTAAATCAAGTAATTCATAACGAAGTATTTTCACTCATTAAAAGCTTATATAATTGATATTAGGAGTTTTGTTTTGACTTAACTCTA # Right flank : AAACCATATAGAATTGTAAACTTTTGTAAATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAAAGCTCGGCGTTACATTCGTTCCGGATAGTTCGTCATCGCATAGATGATTTAGAAAAGAATCTAGCCCCTCGGCGAACCCGGATAACTGTTCGTCATCGCATAGATGATTTAGAAACATCGTACTATGCAAATTGGGAACGCTACACAGTTCGTCATCGCATAGATGATTTAGAAATGTTGCTGCAAGCGATTGAACTGTTGCTCCAAGTTCGTCATCGCATAGATGATTTAGAAAAAAGCCAAAAATTTCAAAAAGAATCTGATCTAGTTCGTCATCGCATAGATGATTTAGAAAAAGCGTATCTACTGCGACATTCATGTAGTCCCGTTCGTCATCGCATAGATGATTTAGAAAAATAATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 4 2523745-2524732 **** Predicted by CRISPRDetect 2.4 *** >NZ_UICD01000001.1 Acinetobacter baylyi isolate AB93A21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2523745 28 100.0 32 ............................ AGAATCTAGCCCCTCGGCGAACCCGGATAACT 2523805 28 100.0 32 ............................ CATCGTACTATGCAAATTGGGAACGCTACACA 2523865 28 100.0 32 ............................ TGTTGCTGCAAGCGATTGAACTGTTGCTCCAA 2523925 28 100.0 32 ............................ AAAGCCAAAAATTTCAAAAAGAATCTGATCTA 2523985 28 100.0 32 ............................ AAGCGTATCTACTGCGACATTCATGTAGTCCC 2524045 28 100.0 32 ............................ AATAATTAAAAATGTGTATACCGCTAACATAA 2524105 28 100.0 32 ............................ AAGTTGATCTAGGCCCGCGTCTGTATAATTTG 2524165 28 100.0 32 ............................ CAAACATTTTTTAAGCGTTCAGCATCTTGTTG 2524225 28 100.0 32 ............................ ATCAATGATGGGATTATTAAAATTACGAAATA 2524285 28 100.0 32 ............................ ACCCATTCGCGATGTAACCCCAAAACCAACAG 2524345 28 96.4 32 ...........T................ ACATCTGTACGGTTAAAACAGTCATCAGCAGT 2524405 28 100.0 32 ............................ TGAACAGCCGATTGAGATTAGCATCAAGGATG 2524465 28 100.0 32 ............................ TACCGAACAACTCATGGCGCACGTCTCACAGA 2524525 28 100.0 32 ............................ CTTATGATGCAATTCAGCCATTGCAAGCAACT 2524585 28 100.0 32 ............................ ATAAGGGTTAAACGTTCAATCGCGTTAACTGG 2524645 28 100.0 32 ............................ AATAAAGCCGAGAATCTTGCGGTATCCCCACA 2524705 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 17 28 99.8 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : CGATATGCGTTCGTCATCGCATAGATGATTTAGAAAAATATGTTTTGGTATGGTGATTTCTCATCGACGTTCGTCATCGCATAGATGATTTAGAAATTGCTCATAAGGGTTGGATGTGACTGTTGAAGGTTCGTCATCGCATAGATGATTTAGAAAAGTCAGCACAAAACAAAACCTAAATTTATGGCGTTCGTCATCGCATAGATGATTTAGAAAACACGGTGAAGCGCGTACTGAAGGCGACGGCCGTTCGTCATCGCATAGATGATTTAGAAAATCCCTATATTCAAATATAGCTATTGGAAATTGTTCGTCATCGCATAGATGATTTAGAAAAACCATATAGAATTGTAAACTTTTGTAAATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAAAGCTCGGCGTTACATTCGTTCCGGATA # Right flank : ATATTAAAAGCAACATCGATAAGATCTAGCTGTCCAAACTATCAAAAGTTGATTCAAAACTAACTTTACTTCAAATTTTTTTTACAGACTCTGATCTTGTACCAAACTATTCATATATGCCACCGCAGCAGTACGGTTTTCGACACAAAGCTTTTCAAAAATATGTTCTAAATGTTTATTCACCGTTCTTGGGCTTAATTCCAAAATCTCGGCAATGTCTTTATTGGTTTTACCCAGTGCCAGCCAATGCGATACTTCGGCTTCACGTTGAGTCAATTGCGGGCAGTATTTTAAAATATCTTCTATACTCAATGCTGTACTGGAAATTTTGATTTGCACCAGATAGTTTTTGGTCGTGCTTAAATCATCTTGCCAAGGTGTCAAAAGAATTAACTGAAGTTGCTGTGTCGAGGTAGAGTAAGTACAGCTCATACGTTTTTTATTGTCTTTGTCTTTTTTAATGTCTGCAAACCATTGCTTTAAGCCCAACTTAAAGCCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //