Array 1 73354-75928 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACXBN010000015.1 Leclercia adecarboxylata strain 16342 NODE_14_length_104171_cov_1.018454, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 73354 29 100.0 32 ............................. TTTTTGTTCCGGCACGTATGGCCGGTTCTAAC 73415 29 100.0 32 ............................. CCCCGGGAGAAAATAAAGAGGGCTTTGCTATT 73476 29 100.0 32 ............................. CTCGTCGCGGTGCTGGTGCGACGGGCCGAGCA 73537 29 100.0 32 ............................. GGGATTTTATGTCTTTATTGACACTGGAAGAA 73598 29 100.0 32 ............................. GAGTATCGCGCAGCGGAAATTCATGCGTGCTT 73659 29 100.0 32 ............................. TAATCCCGGACCTGCTGTATCTGCGCCGACGA 73720 29 100.0 32 ............................. CAATGCTGAACGCGGGGAATACTGAACGCAGT 73781 29 100.0 32 ............................. CTATCGATGAGTATATTTTTGAAAATATCGGC 73842 29 100.0 32 ............................. AATCGGTCATTCTGTATCCTGCATAAAAAAAC 73903 29 100.0 32 ............................. GATATATATACTTATTTTCCTAAAGCTGGTTC 73964 29 100.0 32 ............................. CCATTAACTGGCTTGTCTCTTCATCTGTGGCA 74025 29 100.0 32 ............................. GGTAATGTTTCTGCCATGTTCAGGGGCTGAAG 74086 29 100.0 32 ............................. GGGCTGCAACAACTGGCACAACGGATGTCAGC 74147 29 100.0 32 ............................. AATTTCGGCTCCGAACTTGGACTGCTGGCACA 74208 29 100.0 32 ............................. CATTTAGATTCTGCCGATACATCATCACGATA 74269 29 100.0 32 ............................. GATGGAAAACGCGTCACTGATTTATGCCCCGC 74330 29 100.0 32 ............................. CCCTGAAACAGCACACCGCCGTTGCTGCGCGA 74391 29 100.0 32 ............................. CGATAATCTCCCCACCTCCGGCAACGGGCGAA 74452 29 100.0 32 ............................. GGCTATTCCGGCATCCCTGAGCCGTTTAATTG 74513 29 100.0 32 ............................. AGTTTAATTCGGTAGCCACGTTCTTTTCTCCG 74574 29 100.0 32 ............................. TGCCTACCCAGCTAGGGCAGGCCGCAGGACTA 74635 29 100.0 33 ............................. GTCTTTAGTCGTGCCGACATAGAACGTGTCGCA 74697 29 100.0 32 ............................. AGGCTATTCAGGATGACGATGCTGATTTTGTA 74758 29 100.0 33 ............................. CGGGACTGTCGGGCGATTCTCTCCGCAACGTGC 74820 29 100.0 32 ............................. CACAATTAAGATTTAATCACGTGCTAACAGTG 74881 29 100.0 32 ............................. GCGGCGCAAAACCTTTCAGCCGGGCGCTAAAA 74942 29 100.0 32 ............................. TTGGAAATCCAATCAGCGATGGATTCTTTAAC 75003 29 100.0 32 ............................. GACGTCAGAAAGTTTGAACAGGCGCTGGACTG 75064 28 86.2 10 ................-......TC...C ACAAACAGAT TT,AT [75082,75085] Deletion [75102] 75106 29 100.0 32 ............................. GCGCAGATTGGGAGTTTGACCAGCGACCAGAT 75167 29 100.0 32 ............................. CCCGGCAGCTAAACCCGAACACCAATACCGAC 75228 29 100.0 32 ............................. CGCAACCACAGCCGCTTCGCAGATATATGCGA 75289 29 100.0 33 ............................. AGGCCAGTAGACCCGCAGACAATCGCCAGCCGC 75351 29 100.0 32 ............................. AATACCGACCGCCCCGGATTTACCAGGATGAT 75412 29 100.0 32 ............................. CGCAAAGAAATTCATCCGAGCCGTAGCGCTCT 75473 29 100.0 32 ............................. TTCAAACAATTAGCCGGTGCCGTTCGCAAATT 75534 29 96.6 32 ............T................ CAAATACGTATAGTGAGAAATAACGCCGTTTT 75595 29 96.6 32 ............T................ CATCCATTAGCATTATTACAGGGATAAAATAA 75656 29 96.6 32 ............T................ AAGAATTATACTGATAACTCTTCACGTCAAAC 75717 29 96.6 32 ............T................ GATATCGCGCGGTGGGACGCGCGGCAGCGGGA 75778 29 96.6 32 ....................T........ GTATACGCCAGCGCCAGCACCGGAACCATTAC 75839 29 96.6 32 ............................A TGGGATAGTGTGGCGCGGCCTGATACAACGTA 75900 29 79.3 0 ..C........CTT...........C..A | ========== ====== ====== ====== ============================= ================================= ================== 43 29 98.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTTCTGGCTGCCGGTGAGATTGAGCCGCCAAAGCCTGCGCCAGATATGTTGCCCCCCGCAATTCCTGAGCCTCAACCGCTGGGGGATAGTGGCTATCGGGGGCGCGGCTGATGAGTATGGTCGTTGTGGTCACAGAAAATGTACCGCCGCGTTTGCGGGGAAGGCTTGCCATCTGGTTATTGGAGATCCGGGCTGGGGTATATGTTGGTGATGTCTCTAAACGCGTGCGGGAGATGATCTGGCAGCAAATCATCCAGTTGGGTGGGATTGGAAATATCGTTATGGCCTGGGCGACAAACACGGAATCAGGTTTTGAGTTTCAAACCTGGGGGGAAAACAGACGCATGCCGGTAGATTTGGATGGGCTGAGGTTGGTTTCCTTTATTCCTGTTGAAACTCAATAAGTTGAAAGCTCTTTAATAATATGGAAATGTTGGATTAAGGTTGGTAGGTTGTTGGTTGCTGAAAATTTCTATTAAAAACAGCAAGATAAGATTAGT # Right flank : ACGACTAATCTTACCCCGTATAAAAATAAACAGAAAAAAGCCAGGCACCGTTTGGCGGACCCTTTATCAGGCTTTTTTCCCCGCTTTCGCCAGTTCCTTCACCAGTGGCAGCATAATGCGCACCACGTCCCGGCTGCGGTGTTCAATCCGCTGCGGGAGGGCCTCGTCGATATGCTGCAGATTATCCAGCCTGACGTTATGCCAGCTCGATCCCTGTGGGAAGGCTTTTGATTTTGCCCGCTGCTGATAACCGTCTTTCTTACCTAATGACCAGTTGGTGGCCTCAACATACAGCACCGGGATCCCGGCTTTATCGAAAACTTCACCGTCATTACAGCATCCGGTGCCTTTCGGGTACGCGGCGTTGCCACCCGGGTTGGTCGCGGCAAAAATCCCGTGGGCGCGGGCAATCGCCAGCGCGCGATCACGGGTTAATTTACGCACCGGGGCAGGGGTGGTTTTTCCGCTGTTAAAATAGAGTTTATCGCCCACGATTAAGT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //