Array 1 20975-20414 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VLJV01000002.1 Prauserella rugosa strain DSM 43194 JD82DRAFT_unitig_1_quiver.2, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                                                          	Insertion/Deletion
==========	======	======	======	=============================	=========================================================================	==================
     20974	    29	 100.0	    32	.............................	AACCGATGAGCACGACGTTCACCCCTGCCCCT                                         	
     20913	    29	 100.0	    32	.............................	GGACATCGGAGGGGAACACGATGAACGCCTAC                                         	
     20852	    29	 100.0	    32	.............................	GAAATGGCGATGATGTAGATGCACGCGCGAAC                                         	
     20791	    29	  96.6	    32	............................G	TCCACACCGGACTTGACCACCCTTCCCGGTAA                                         	
     20730	    29	  96.6	    32	............................G	GGACTGACGTGATCAACGGACACCGACACGAC                                         	
     20669	    28	  93.1	    32	.................-..........G	TGGGACTTGATCTCGTTCGCGAGCGGGCCGTT                                         	
     20609	    29	 100.0	    32	.............................	GAGGACTGGTACGGCGCCACCGACGACGCCGT                                         	
     20548	    29	  93.1	    73	.......................T....G	GCCCGGCCAGACGAGCGGGAGGGGGTGATCCAGGCCGGTGCGCCAACGCCCGATCCTTTTGACGAGCGGCCGG	
     20446	    29	  75.9	     0	....G......G.......T..CT...AG	|                                                                        	A,TTA [20420,20427]
==========	======	======	======	=============================	=========================================================================	==================
         9	    29	  95.0	    37	GTGCTCCCCGCACGAGCGGGGGTGATCCC	                                                                         	       

# Left flank :   CGGCGAAGGGCGACGTCGCCGAGCCGGGGCGGAACGTGCGCGCGAAGACCGGACTGAACCGGTCGATCCTCGACGCGGCGCCGGGCGAGTTCCGACGTCAGCTCGACTACAAAACGCCCTGGTACGGGTCCACGGTCGCGGTGTGCGACCGGTGGGCGCCGACCAGCAAGACATGCTCGGCATGCGGGGCAGCGAAAACCAAGCTGCCTTTGTCCGAGCGGGTCTACACCTGCAACCACTGCGGGTTCGTGTGTGATCGGGACGTCAACGCGGCACGCAACATCGCCGCAATGGCTGTCCCCGTCGACCCTGGAGGAGGGCGACGCTAAACCGCGCGTGGAGCGGGTGTAAGTCCCCGCCGGCCCTTGGCTGGTGTGGCTCTCCGCGGCGAAGCGCGCAGCCCAGAGCACTGCTCCGGGCACCGTAGGAGAGTGATCTCCTGCTCACCCCTCCTAACTCAATAGCGGGGATACCGACGGTATGAGCGCAGGTCAGGAAGT
# Right flank :  GGCCTGATAAATCTGCGATCCCGGTATAGCGCCCTGTTCGCGCTGTCGCTCACGCCGCGACGTATCAGGGCCTGATATCTGTGCCGACGCTGCACGCGACAGTGGCAGGATGCCCGCTATGGCTGCCAGCACATCGTCACAACTCTCTCGGACTGTTGCTGTCGCGAATCAGAAAGGTGGGGTGGGCAAGTCCACCTCGACCATCTGCCTTGCCCGCGCCGCACACATCGCCGGACACCGAACTCTTGTCGTCGACCTGGACGCCCAGGCCAACACAACCTCCGACCTCGCTGCCGAGCCTGTGCCGGCAGATACCGTGACCATCGCCGACGCGCTCGTCGGTGACGTCGAACTCGCCGACGTCGTCGTGCCTGCAATCTGGGAGCGCGTCATGCTCGCGCCCGCCGGTGCGACGCTGTCGGTGGCCTTGGACCAGCTCGCCTCGGTCGTAGCGCGCGAGATGCGACTCCGCAAGCTCATCAAGTCCGTGACGACCGAGT

# Questionable array : NO	 Score: 6.11
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGCTCCCCGCACGAGCGGGGGTGATCCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [4,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGCTCCCCGCGCGAGCGGGGGTGGTCCG with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-12.90,-13.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [26.7-43.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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