Array 1 355477-354451 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUEB01000001.1 Clostridium sp. AF34-13 AF34-13.Scaf1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 355476 34 80.6 35 A..A.-......A-.A.A.................. GAACAAAAGGACTTCCTGTCATTCTTGCATCTGAA 355407 36 100.0 37 .................................... AAAATATGGTCCTGCAAAAAAATTTAAAAGGAAAAGA 355334 36 100.0 36 .................................... TAAAATAAATTCTGCAATGGCAAGAGAAAAACTACT 355262 36 100.0 36 .................................... AAATTTTAAAACACAATGAATGGGTAAGAGAAACAA 355190 36 100.0 35 .................................... AAAGAACTAAAAATGCAATGGCAAGGCGGCTCAAA 355119 36 100.0 32 .................................... AAGGATGGTTGATTTTATGAAAGAATATAAAG 355051 36 100.0 34 .................................... TGGAATAAGTATATGAATAGCCATTATGATATTT 354981 36 100.0 33 .................................... CTACATTTGGCGTAACTCCATCAACAAGATAAA 354912 36 100.0 34 .................................... TAAGGCACAAAGATGTATAATAAGTATATCAAAT 354842 36 100.0 34 .................................... TAAAATACAAAATTCGGAACAAACAAGATTGCTA 354772 36 100.0 35 .................................... GTGTCAAAACAAACTTTATATAAGTATGAAAATGA 354701 36 100.0 35 .................................... TATTGCTACAAAGATTTATTGTGCATCAAAGCATG 354630 36 100.0 38 .................................... GTAAGCTGATTATACCACAGTCGGCGAAATGGTACAAG 354556 36 100.0 34 .................................... GATATTTTGATTATGAATCATTCGGCAGGGATTT 354486 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 15 36 98.7 35 GTTCTCGTCCCCTCTCTGGGGATTCTTTTATTTAAT # Left flank : TCACTCTCATCAATATTGCTATTTCGTAAATATCTTTTAACAACAACAAGCTGATTATTTATTTTCGCCTGAATAATCTTCTTAGATAACTTCACACAAAAATCTTTATCCTCAGACAAAAAAATCTGCTTCTTCAACCGCTTGATATTAACATGACCGGTCGAAATCAGACATCCAAAATAAGAACCATTCTTTGAAAAATAGCTGACTCTTATTCCTTTTTCGAGACAAAATTTTGTGCACTGTGTACTCATCTGAGAATTGCCAAAAATAGAAATCGCTTCAACAGTTTCCTTAGGCATCTTAGAAACCTCACCGCTTTTGTAAGTTATCTTTAAACATCCTCCATCAATGCTCATCTTAGAGCCATCTTCAACTACATAGACAAAACTCATAGGCATCCTCCTTTTGTGCTTTATTTTTTTCATATATCTTCAACTTTAATTCATAACATAGTGATTATTATTTTAAAGTATTTGATGATTTTACACAACAAAAAT # Right flank : CCTGTCTTAGAGAACTCCGATAAACACTTGGCTATTTTGTATGTTTGCGACTGACACATATAAGTACAATATTTCAGCCACAATATTTTCATAAAAACCTACTCAAAGCCCGTGTTTATCGGTATCGGGGCAAAATTATGATTCTTCAGATATTTCTATCCGACATTTGCCCATTTCGACTATATTACCACAATAATTTGTGCATTTCAACATACGCGGAGATACTCCAGCTTCTACATCTTTGTTGTAATGATGTTCACTAAACTTTTTACTCATAAATCTTGCAATAACTTCCGTCCCTCTTTTTTCACCAAGTAGATTATATATAACCGTTTTTGTTCCATATCCACATCCACCGCCAAGATAGATTGTATTTTTTTCTGCTGCTATTTTTATAAACTTATCTACATATACTTTTTTATACATATTATAGAAATTCTGTACTGCCTGTTCTATATCTGCTTTTGTTAATGAAACAATCTTTGTATCAATACTTAAAT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCGTCCCCTCTCTGGGGATTCTTTTATTTAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.20,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 102534-104467 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUEB01000010.1 Clostridium sp. AF34-13 AF34-13.Scaf10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 102534 30 100.0 37 .............................. CCGCTCGATAATTTCGATTTATCTGTAGATGAGTTAA 102601 30 100.0 36 .............................. GAAAATACAGAATTAGAAAAAGCCTTTGATAAGGCG 102667 30 100.0 36 .............................. ATTGAAAAGGTGTTTTTAGAAGAAAAAAACGAAACA 102733 30 100.0 36 .............................. CTTTTCAAAAAATACTCATTTGCTTCAAGAATGTTT 102799 30 100.0 34 .............................. CCATTTGCACTATACACAATCTTGTACTTGTTTT 102863 30 100.0 35 .............................. AAATGTTTTTTGATCGTTTTTATCGGCGTCATCTC 102928 30 100.0 35 .............................. TGTAGCGGTCAATACACATCTTTAATCAGTAGAGA 102993 30 100.0 36 .............................. TAAATTGTTTAAGAAATAACATAGCACTTCAGCTAG 103059 30 100.0 37 .............................. ATGTTAAGGTGGAGTATATCAGAGTTAGCAGACAGGA 103126 30 100.0 35 .............................. GCTGATATTCAACAGATAGTTGATGCAAGAATTAA 103191 30 100.0 36 .............................. AACTCTATAACAGGGTTGCAAAAAGCGGCAGACAAA 103257 30 100.0 35 .............................. GATGTTAAAGTCGAATATATTCGAGTCAGCCGACA 103322 30 100.0 36 .............................. CCATTTGCCTGACTGGTACATGATGCAAGTGTTACG 103388 30 100.0 36 .............................. AAGCCTTTTCACTCAGAAATCCGACCGGAGCACTCG 103454 30 100.0 34 .............................. TTGAATAACTTTAATTTATCTGTAGATGAGTTAA 103518 30 100.0 35 .............................. TTCGTCCTTTAAATTTTAGAGTTGCTGTTGACGGT 103583 30 100.0 34 .............................. TATTTAATAGACCTAGCCCTGTGTTATCGTTGTA 103647 30 100.0 34 .............................. TATCTCAAAGATTGATGCAACAACTTCAAAACTT 103711 30 100.0 35 .............................. AATTTAATTGTAGTTAATGCTTCATAAGAAACACC 103776 30 100.0 35 .............................. GCAGACCTGTTAAAAGGTCTACTAACTGTAATCCT 103841 30 100.0 36 .............................. GTCAATAACTTTGGCTTATCTGTTGATGAGTTAAAC 103907 30 100.0 36 .............................. ATTTGTTTTGGCTGGCGAAAGATTTTACCTATCACT 103973 30 100.0 36 .............................. AAAACTTACTATTGATTTAAAATCTGCACAAGAAGA 104039 30 100.0 35 .............................. TAAGAAAAACTATAAACAATATAATTTTACTTGTA 104104 30 100.0 36 .............................. AGTGTGGCACGGGACATAGCAAGAGTTTTAAACGCA 104170 30 96.7 39 .............................T GTATGTTTTTTCTGATAAATCATCTGCACGGGTAAACGA 104239 30 100.0 37 .............................. TTGAGTCACGAAAGATATTCGGATAATTTTACTTTTG 104306 29 80.0 35 ..-.......AT.....T..TA........ AACTCAACAAAAAGGATTTCTTCACACTCAACAAA 104370 30 93.3 38 ..........A..........A........ CCTATGGCTTCTGCAACTGAATTTTTTGCACCATTACC 104438 30 76.7 0 A.........A......G...A..A.C..C | ========== ====== ====== ====== ============================== ======================================= ================== 30 30 98.2 36 GATTTAATAGGAACATAATGGGATGTAAAG # Left flank : GAAAATCACCATATTAATTTATCGAAAATACAAGACGAGAAAACTTTAAAATACTTAGCAGGATTTAAGAGGTTTTCTACGGAAAGGGTAATGAAATCATTAGCTGGGGAATTAACAGAAAATGAAATGTGGTCGATAAAAGGAAAAGAAATGGGGGAATGTTGGCATAAGGATTGTTGCATTTCAGAACATAAAGACAGTATCAGATGTGGACAACCAAATATCAAATCAGGAATTATGAAAATGCGTATGTTAATACAATCTGTTGAAGTGCAAAAGGTACTAAGAGATATAGTAGTTTAGAAATGATTGCTGTGCTATTGTCGACCTAAGAAAGTGCATTTTTGTGGGAGAGTTGACAATCCATTGATTCGTGTGGTGTGAGAAGCGTTGTGAGCAAGTAATTGAGCAGATTGCGAACATCTACTTGACTTGTTTTTTCGGGGGTAGACAAAAAGGAGGTTGAAAATCGTAGAAAATAGAGTATTATATAGGTATGG # Right flank : CTGCCAAATATTAAGCATGGAAGGAGAAAAATGTATGGAAGAAAGAATAACAGGAGTAATGATTTATTATTATTTTGTGTGTAAGCGTAAATTGTGGTATTTTTGTCATGAAATTAATATGGAATCAGGTAATGAGGATGTGCAGCTTGGAAAGATTTTGGATGAGACAAGTTATGGAAGAAGTGAGAAACACATTCAGATTAATGGAGAGATTAATATAGATTTTATAAAAGAACATCGTGAGTTACATGAGATTAAAAAAAGTAAGTCAATAGAGCAGGCAGGAATATGGCAAGTTAAATATTATCTGTATTATTTAAAAAAGCGTGGAGTAGATGGATTAAAGGCAAAAATTGATTATCCATTGTTAAAAGAAAATGTTATGGTTGAATTATCAAAAGATGACGAAAATCAGCTACAATTTGTAATTGAAGATATTGTTAAAATTAAAAAGGAAAAAAGACCGCCAATTATGAAGAAAACAAAGTTGTGTTCAAAAT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTAATAGGAACATAATGGGATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 1158-1570 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUEB01000039.1 Clostridium sp. AF34-13 AF34-13.Scaf39, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 1158 37 100.0 37 ..................................... TCGTATAATTCACTGTAACGGCATTCTTTACAATTCC 1232 37 100.0 37 ..................................... AACGTATTGTATACCCATATTACGTTCATCCATCTAA 1306 37 100.0 37 ..................................... TTGGTTTACTGTCAATGTACCTTATTTTAACTTAACA 1380 37 100.0 43 ..................................... CCACACATTTCACATTTAAGACAAATACCATATCCAGCGTAGA 1460 37 100.0 37 ..................................... ACTTGCCTGAGTTATTAAATTTTCAGCTGCATTTTTA 1534 37 83.8 0 .......................G..A.....ATT.A | ========== ====== ====== ====== ===================================== =========================================== ================== 6 37 97.3 38 GTAGAAATGGAGAAAGCCCGATAAAGGGCATTGACAC # Left flank : GTGTGAAAGTTGGAAAAGTAACAGTTCAGCCTTTTATTTCCTCAATTCATAAACCTGCCAGCAAGCTGTCAGTCGCTGCTTTGCAGCTTTTGTTTATTTACGCGAAAGCAAAGTGAGGATGGAACAAATAAATTTGTTCCATCTGAGCGTGCTCGCGAGGGCTTTGCCCTCATTTCAGAAATGAAAGGCTATTCTACCATAAAAAGATAATCAACAATACAATGAGCAAGCTCAAGTATTGTCAATTATTTTTTTTGGCTGAACTGTTACTTGGAAAAATTGGGAATTGAATGTTTTTATATACATTTATAACATGATATGTTAAAATAAAGTTATAAATCCATTTTTACAACTAAGGTCTAAAAATGACAAAAAAATATGAACAAAGTGTGAAGAGACACAAAAACAGCAAAAAATAAGCAGATTTTGATGTTGTCAGACAATTACCTGCAAAATCGAGTCTGCAAATGCTTCATTTTAGGGCGTTCCCAGAGGGGAGC # Right flank : AAAAGTAACGCAAACAATGATAAAATCGCCATTTAAAGCAGTTAAGTGGTGATTTT # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAATGGAGAAAGCCCGATAAAGGGCATTGACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 67172-68854 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUEB01000006.1 Clostridium sp. AF34-13 AF34-13.Scaf6, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 67172 36 100.0 30 .................................... GCTTTTCTACCGAAGGCAAGGCAAAAAACG 67238 36 100.0 30 .................................... TACTCTTTCTATCTGATTGACTAAGGTTTT 67304 36 100.0 29 .................................... TATATATATGAGTGTATGCTGTATAATAA 67369 36 100.0 29 .................................... TTCTTCCACCTGCATATAGTATCGCTTGT 67434 36 100.0 30 .................................... GGATAAATGTTGTATTCCCAGCAGGGACAC 67500 36 100.0 30 .................................... ATCAAAAAGTTTATTATGATTATTCAGTCT 67566 36 100.0 29 .................................... TTCTTCCACCTGCATATAGTATCACCTGT 67631 36 100.0 30 .................................... TATTTGTTAAGAATCCTAATGCAGAATATG 67697 36 100.0 30 .................................... GAGTTTGGAGAGACACACGGCATCTGTACA 67763 36 100.0 30 .................................... TTTCTTCCACCTGCATATAGTGTCTACTGT 67829 36 100.0 30 .................................... AGGCTTTGATGTCTAAAGCGTTCTCACTCA 67895 36 100.0 30 .................................... AAAAACATCTGATAGCACTATCACTGGAGC 67961 36 100.0 30 .................................... AATAACGCTGAAATCGTTGAGATGGACGAC 68027 36 100.0 30 .................................... AATGAAACACTGTGCGATGCGGAACTTTTG 68093 36 100.0 30 .................................... GGATTTCTAAGTGAAAAGGCTTTGGAGGTC 68159 36 100.0 30 .................................... AACTTCTTTTATAAATGTGTTAGGCTTTTC 68225 36 100.0 30 .................................... AAAGCTGGCAATGATACGGCGATGTGCCGC 68291 36 100.0 31 .................................... TCTTCCATTGCCTGGCGTGTGCCTAGTTTCA 68358 36 100.0 30 .................................... TACTACAGAATCTATTGTTAAAACATATAA 68424 36 100.0 30 .................................... TAATCTTTTTATAATTTTTGTTGTACTAAC 68490 36 100.0 30 .................................... CCATACACTCTTTGTATGGTTCTGTCCGTC 68556 36 100.0 30 .................................... TTTTGCAAGCTGTGGGATTGTCGGAATATG 68622 36 100.0 30 .................................... CAGAAACTTGATAATATCACATCTTATTAT 68688 36 100.0 30 .................................... ATAACTTTTCCGCATTACCATCGGATAATG 68754 36 100.0 29 .................................... GCAACGCAGGAGAAATATGACTCTACTCT 68819 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 26 36 100.0 30 GTTTGAGAATGATGTAAAAATGTATGGTACTCAAAC # Left flank : ATGAAAAAAGATGGATGCAATATCAGAAACTCAATCAGGTGATACAAAATTTTTTCTATGATATGGAAATGGAATTTGATTTTGAATATGAAATTGATGAAAGTGTAGATATTAGTAAATTGGCAAAAGCTGTCGGAATACATATAGTTCAGGAATATGACAATGATTTGGAGCGATTGATAAAATATTGTATTCTAGTGCGGGACTTATTAAAAATTCAGGTATTTATATTCTTTGACTTGAAAAGATATTTTTCTGAAAAGGAAATACAGGACTTTTATGCCGAAGCTATGAGTAGAAAATGGAATATTATTTTGTTTGAGAGCAGTCAATTCAGTATATTAGAGGAAGAAAAGTATTATATTTTAGACAAAGATTGCTGCTTTATAAGTTGAGTTATTTGCTCATATATGGTATTATAAAATTATCTAAAGACAAGTATGTTTGAGTACGGTATATACATTTTATGCTGGTGATGGCATTTCATTTTTGAATTTGAG # Right flank : CAGGTCAGATTTACATTAACGGTATTAACATACTACTTATTAATTTCTGATGAATGAATGTCGTACTTGTAGAAATGAAGAAGCACATTAAAGGACATTATTAAAAAAAGTAACGCAAACAATGATAAAATCGCCATTTAATGCAGTTAAGTGGTGATTTTTTTGTATGTTATTAACAAAGAAATCTATATAAAATAATGCATATTGGATAAGAAAATAAAAAATCTAATATTACAAAATTGTTTATAGTGTACTAAATCATATAAAATATTTCTAACAATATTCACATATTAAAAAGATAAATCGTATGTTATCATTATTTTACTTAAGAAAAAACAAACATTTTTATCTGTTTATCAGATGATAAAGTTCAATTATGAACATATATTTCTGAAACAAATACTGAAAGAAGGTGGAACAAGTGGCTAATGAAATACAAAATAAAGGAAAATCTAAAAAGAATAGAAAAACTGATGAAGAAGTGATACAGATAATAAGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATGATGTAAAAATGTATGGTACTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //