Array 1 237907-239394 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCMD01000004.1 Lactobacillus kullabergensis strain Dan23 NODE_4_length_271562_cov_49.5385_ID_774, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 237907 36 100.0 30 .................................... ACAGATACCAGGAATCCAAAGATCATCGGG 237973 36 100.0 30 .................................... TCAAAGCCCTGAATTGATCCAACAGCAGAT 238039 36 100.0 30 .................................... CACAAATAGCATATTTTGACAGTGAACAAG 238105 36 100.0 30 .................................... TAATTATTCTTACCATTTGCAATCCAGTCA 238171 36 100.0 30 .................................... TAGCTTTTTGTGATATCAATTGTTTTAGAT 238237 36 100.0 30 .................................... CTAATTATTTTTAATTCTGAATTTTTCATT 238303 36 100.0 30 .................................... TTTTCGATTAAACTTAAACCGTTAGCTATT 238369 36 100.0 30 .................................... CCAAATTTACACTTGACCTAAAGACTACTA 238435 36 100.0 30 .................................... TATGTTAATGTTCCAGTTAGTTTTAATAAA 238501 36 100.0 30 .................................... TTACATCTAGTTTTGATGAAAGATTTTATT 238567 36 100.0 30 .................................... TTCAATTCTTGCCCTGGTAAAAGATCCGCA 238633 36 100.0 30 .................................... TTCAATTCTTGCCCTGGTAAAAGATCCGCA 238699 36 100.0 30 .................................... CGGTAGGCTTTCTTCGCTCGAGTTTTATTA 238765 36 100.0 30 .................................... TAAATATCAATTTTGACGTTCCAAAGGAGG 238831 36 100.0 30 .................................... ATAATCCAAACTATGGTTATATAAAATTAA 238897 36 100.0 30 .................................... CTAAAAAATTATTCAAGCAACATTGTGAAG 238963 36 100.0 30 .................................... TATTCATGGGAAAATATTGCTAAAATGTTC 239029 36 100.0 30 .................................... CTAATATAACTGGATTAGCTCCAACAGTTA 239095 36 100.0 30 .................................... GAATAGATCTTTTTGGTGTTAACCCTGAGA 239161 36 100.0 30 .................................... TGCTACCTGCCAATCGGTAAGTTCTTCAAT 239227 36 100.0 30 .................................... AGATTAACAATGTCGCAGATTCTGCTCAGG 239293 36 100.0 30 .................................... GTACCAGTCAATCTTACCGGTTATCTTGCA 239359 36 88.9 0 ........CA.............C..........G. | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.5 30 GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Left flank : TTAGTGGAGATATTACTAAAAAGTATATGCCCCATATTGTAAGTAGTTATCTGAAAAATTTAGACGAAGAAAATCGCAATAAAGTGATTAAGTCTTTCTATGATTTAGAGTCAACCTTGCATGATTCACTTTTACTTGAAGACTTACCTTTAGCAATTAATTTTGATGAAGACTTAAAAAAATTACTTAAATTTACAGAAATTCATTTAGATAAATCAATGTTGCTCAGTCCATATGGTATAATAGAAACAGTTTTAAAAATTCACCAAACTTGTAATTTAAAATCAGTTCCTGTTATTTGTAATGTAGCTCATTACTTAGAAGAGCAGGAATGGCAAGAGTTAGCTAGTCTTGTCACAGAAATGAATTTAATTTTGGTTGTAATTGAATTCACAACAAGAGAAAATTTGGCAATATCTAAAGACATACCTTTTTACTATATTGATAAGGATCTAATCGATTGGTACTAGCAAAAATTAAAATCAGATTATAAAACATCA # Right flank : CATAATTAATTGAGTTAAGGAAAGCAAAATTTCAAATGAAAAAGTCAGTCAAATTAAAGAAATGTGGAAACTCTAGAGCGGTTGTTATCTTTAGAAAATGCTGAAAAAATAAACGCAGATCAGCTATTTACAGAGTTGCAATAGACTCTAATGAAGATAAGCAAACTATAACGATAAAAAAGGTTGAAGGCTGAATATAATTTTTTAACTAAAGCAATTACAGAATATAATCCGCTGCCTATAACAAAGAGAAACTGAAAAGCTTTATCCCCGAGATAATAACTGGCTCAAGCCCTAAAGAAATGATATTAACTTTTGGGTACTCAGCACATAGTACTTTAATATTTTAAGAAAATGACACTAATTAATGAAAGGCTGCTATTTGTTCATATGAAAAACATACTAAAAAGTAACAACAACAAACTATACCTTTTGTCAGTGATCACCGATAACTTGGGCAGCTCTTTAATGTCATTTGCATTGCCGTTGATGGTTCTTGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.90,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //