Array 1 58145-59014 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRCA01000001.1 Enterobacter roggenkampii strain GN02693 GCID_ENTE_00226_NODE_1.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 58145 28 100.0 32 ............................ TCAGGATAACGCGCAGGCTGGCAATGACGCTC 58205 28 100.0 32 ............................ CGAACGACGCCATCACTTTTGCCATCCCTTGC 58265 28 100.0 33 ............................ TGCAAGCAGGCGGACGCGCCAGCGGCGCTGGCA 58326 28 100.0 32 ............................ ATAACGTCCCCTTACAGGCTTTTGAATGCCTT 58386 28 100.0 32 ............................ AGCTGGACACGGAGAGGAACGCGGCATGAGCG 58446 28 100.0 32 ............................ ATACGTGCTCGCCCCTTTGATGGGTATTACCC 58506 28 100.0 33 ............................ AAAACAACACCAGAGGGCGCGAGGACCATCCAC 58567 28 100.0 32 ............................ ACATATTTCGTCAAAGCTGCGGGTGATTCTAT 58627 28 100.0 32 ............................ GACGAACTAGCGCAATACGTAAGCCAGATCCA 58687 28 100.0 32 ............................ TGTGCCCAAAGCAGGTCACTCAGTTCTGATGG 58747 28 100.0 32 ............................ ACTCACGAGAACGGGCGAGACGGCAACCGATG 58807 28 100.0 32 ............................ AGGACGTTTTGATGCGTCTTGCCCAGCTTTCT 58867 28 100.0 32 ............................ TGGAATTCAGGGCGACCGTCCGGACCATTGCC 58927 28 96.4 32 .....A...................... TCTGTGGCTTGCCGCCAAAAGAAGGCCGACTA 58987 28 96.4 0 ........T................... | ========== ====== ====== ====== ============================ ================================= ================== 15 28 99.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGTTTGCATAAGCTGTTTGGCGGGGTGGGCTTTATCAGCGGTATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATCGCCTACGGCGTATTGATTGGCGAAGTGGTGGCGCCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCATGGCTGATGGTGGGATTGGATGAGACATTCGCGCTCGACAAGGTCGGCGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCGGTGGCGTTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAACACCTGCGTGGCGGTAGGGGTTGGAATCTGTTCCGAGGGAAGGGGTCTACGGACCCTTTTTTATTGGTGAGTTTTAAGTTGTTGATTTCACAACGGTGAATTGTTGGTGGGGAAAAAAGGGTTTACGGAGAATTTTAGGGGGATTTCTTTATATCACAAGAAGATAGGTGTAGATTGTTCCA # Right flank : AGCACTTCAGCCGGGTAAGCGTCGGTGGTTAGGGTCCAATGCCGAACACGCAGTAGGCACAACGTAGGCCGGGTAAGCGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAACGTTTATTGTTTATGCGAGGACCAAATCGCCCTGGGGATGGCACGAGCACGCCAACACGTAACCCTCGGCAATTTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTGTACTCCCCGGAAACCACCTTTGTTTTACAGCAGCCGCACACCCCGGCACGGCAGGCCGCCGCCACCGGCACGTTGTTGCTTTCCAGCGCCTCCAGCAGCGTCGTGCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAACGGGTCACGCCGAGCGCTTTCACGTCTTCTTCCACGATAGCCATGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 73878-74631 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRCA01000001.1 Enterobacter roggenkampii strain GN02693 GCID_ENTE_00226_NODE_1.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 73878 28 100.0 32 ............................ AGTTCACAAACCTGACCAGCGGCACCATCTAC 73938 28 100.0 32 ............................ GTTCTGTTCAGCGCGCGGTTGTATGCCATCAG 73998 28 100.0 33 ............................ AAGAGCGAAGGGCTGCACTCCATGAGCTGGCCC 74059 28 100.0 33 ............................ ACCAGCCACCGCCGTATTCTTTCGCACGCTGAA 74120 28 100.0 33 ............................ ATGAGGGCGCACCGCATCATAAAAATGATGCTG 74181 28 100.0 32 ............................ TCATCGAGTGTGAGGCTGTGTGATTCCATGGT 74241 28 100.0 32 ............................ AAAAGAGGCGCTGGACTGGCTGACGTCAAAGG 74301 28 100.0 33 ............................ ACTACCGCCATTTACTATCACGGCTGCTGAAAT 74362 28 100.0 33 ............................ GCCAAGCGTGGCACCACCGTCGGTTTTTGCCTC 74423 28 100.0 32 ............................ GGTCGGAGTAAACCAGCTTGGTGACGAAAGGA 74483 28 100.0 32 ............................ TACCTGGGCTTTTCGCCTCAAAAAGTTATTCC 74543 28 100.0 33 ............................ CTTATGCGGTGTACCATGAGGCGAAACCAGCCC 74604 28 82.1 0 .....................AC.ACT. | ========== ====== ====== ====== ============================ ================================= ================== 13 28 98.6 33 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACTCCCACAAACGCAGCCCGTATGTCGTTGCCTCGGGGCTTATCTGGAAGAGGTAAAATCCGGCCTCACAGAATCCATGCGTGATTTTCAGATAGTGGAATTTGAGGACGAATCGGAACCACCGCAACAAAAGGAATGGCTGCTGGAAGATACAAAAACAAAGTGTGACTACTGTCGGGCGTTAAACCATGTACTAATGGTGTCGCAGTTTGACCGCGATATGCTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCGCCTCAACGTGCAGAAACGATAGTTCACATTATTTCCTGAATGTAATTCGTAGTGTCGGGGAAAGACTACTGACGCCACTGGCTTGACCCTTTTTTTGATGATTACGTAACCTTTTGATTTATATAATGCGAATTTACGTTCCAGAAAAAAGGGTTTTATGCGGGAAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTGGTTTCCTTTCA # Right flank : AAAAACAACTCTCTAAAACATTCAGCTTACCTATTTAAAACTTAATACGATCAAACCCACATTCTTTATTTTTCGCAATAAATAAAAAATTCATTCACATACCAATTATATTCTAATGAATATATTGTTCGTAAAAATAATGCATTAAATGGAAAAGTGATTTTTCACTTTATTATCGCGGTAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTTCGATAACATACCGCGCATTCAACACCTTGAAATAAAAGCCCTTGCTATGTCCGTAAACAGCATCACTCCAACAGACTTAAAAACCATCCTGCATTCAAAGCGCGCCAATATTTATTACCTGGAAAAATGTCGCATCCAGATGAATGGCGGGCGCGTTGAATATGTCACCCAGGAAGGCAAGGAGTCGTTTTACTGGAATATTCCCATCGCGAATACCACGGCAGTGATGCTGGGAATGGGAACATCCGTGACACAAATGGCAATGCGGGAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 84126-85114 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRCA01000001.1 Enterobacter roggenkampii strain GN02693 GCID_ENTE_00226_NODE_1.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 84126 28 100.0 32 ............................ GTCTGAAGCGTGGACGATTATCCAGGGGAAAA 84186 28 100.0 32 ............................ GACTTTGAACAAGGAGTTTATTGAAGAGAACC 84246 28 100.0 32 ............................ AGACGGAACCAAATCACCTGTAGTGAGGAAGA 84306 28 100.0 32 ............................ GATACGACCCCAGAACGCATGTCAAATGAGCT 84366 28 100.0 32 ............................ GGAAGCATATTCAGGTTTGGGAGTCGAGAAGG 84426 28 100.0 32 ............................ TCGCGTGTATAAGAAATTAGCGTAAGGAGATG 84486 28 100.0 32 ............................ GTAATGAGTGGTGGTTAGACGAAGCACAGGGT 84546 28 100.0 32 ............................ TGCCAATCAGCGCAGGTAACTCTGTCGGTTTC 84606 28 100.0 32 ............................ GTTGGCCATATGGGGCTGGATGGATTCTATAC 84666 28 100.0 33 ............................ GCTGCCGTTTGAATCAATGGTGATGGATGCGAT 84727 28 100.0 32 ............................ AGGGAACTGGCGTAAACGTCCAGACGTCGGTG 84787 28 100.0 32 ............................ GATTACCTTTCCGGCTCTGTACGCCTGCCGGT 84847 28 100.0 32 ............................ ACTATCCAGGCACATGGCGAAGAAGTCAGCAC 84907 28 100.0 32 ............................ AGCCCGGCAGAACCTAACCAACCCGCACCAGC 84967 28 100.0 32 ............................ GCTGGAATCAAAGTGATGGAGTGAGTATAAGG 85027 28 82.1 31 A...A......C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [85051] 85087 28 71.4 0 ....A...T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 17 28 97.3 32 GTGCTCTGCCGTACAGGCAGCTTAGAAA # Left flank : AAACGTGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGGCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGCACACTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTCACCTCCTGAGTAATGTCATTTGTCATGGGTAAGTATAGCCATTTGTCAGGGTGGGTGGAATGGGTGTTTTTGTGAGGGGGAGTGATGCGAAGAAAGGTGTTTCGACCCTAATTTTTAGCGTTTGTGTAATTTATTGATTTTAAATGAGTATTCTTGGTGGGTAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : GCTGGAACGAACGGCTAAATAATTGTTCAGATAATCGACTGCTACACAAAAAAATAAGGCCGGGATATTCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAAC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //