Array 1 9226-10848 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOMS01000023.1 Roseivivax sediminis strain YIM D21,KCTC 23444,ACCC 10710, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 9226 29 100.0 32 ............................. GTCGGCCGCGTTGTCGCCATCAGCCCAGAGAA 9287 29 100.0 32 ............................. GACTTGCACCACTGCGTCGTTTTCCTTGTCGT 9348 29 100.0 32 ............................. TCGCGTCACAGCGCGTCGATCTGGTGGCACGT 9409 29 100.0 32 ............................. TCGCAGACCGAAGGGATGATGTCTCCGGGCGC 9470 29 100.0 32 ............................. CCTACAATTTCGATTCTGCCCTCCATGGGCAA 9531 29 100.0 32 ............................. CTGACGCGCCAGCACGTGAACGCCGAGGAAGT 9592 29 100.0 32 ............................. TATCACGGACACCGATGGGGTTGTGGCGGTGG 9653 29 96.6 32 ............................T GGCGCATTCGAGATCCCGAGCTTCACGGCGAC 9714 29 100.0 32 ............................. CAGGTGCCCGATTTCGGTTCGAGTCCGAGACC 9775 29 100.0 32 ............................. TGATCACGTGCCTCCTTGGGAAGCGCCGTGAA 9836 29 100.0 32 ............................. GGGAAGCTGGCGGAGGACATCGGGCAGGGTCT 9897 29 100.0 32 ............................. TCACGCCGGTTGGCATCCGCTCGGAGACTGCG 9958 29 96.6 32 ............................T TCCGTTGACCCAAGAGCCGCCGTTTTCGTTCA 10019 29 100.0 33 ............................. CCCCCTTGGATCGGATCAGGCGCACCACGGACT 10081 29 100.0 32 ............................. GTCGCGACCGAGACACTCGACACGATGGCGGA 10142 29 100.0 32 ............................. GTCGCGACCGAGACACTCGACACGATGGCGGA 10203 29 100.0 32 ............................. CGGCTGAAGGACGATATCCGCGCTTTGCAGGT 10264 29 100.0 40 ............................. GCCTCCAATGCCGGCTGCGGCTTCCTGCTGCGCGGCACCG 10333 29 100.0 32 ............................. AACTCGAAAATCTGGTGCTTCAGCGGCGGCGG 10394 29 100.0 32 ............................. AAGACGACCACGACGGCCTCCCTCGAGGACCA 10455 29 100.0 32 ............................. TCGACACTGAGCGAATCCGCAGACCCGATAGA 10516 29 100.0 32 ............................. GACGACCTGCTCGCCGACTAAAACCGGCGCCC 10577 29 100.0 32 ............................. TTGTAGGCGCGCTCGAAGGGCGAGGTGCGGTG 10638 29 100.0 32 ............................. CCGATCGGCGAGTTCGGTCCGGGTGCATCTCC 10699 29 93.1 32 .......................G....T CGGCGCCGAGTTCTTCGCGCCTCTGGACCGGC 10760 29 96.6 32 .......T..................... TGGGATCACTGGTTCTACGCGACGCAGACCGA 10821 28 93.1 0 ....-....................G... | ========== ====== ====== ====== ============================= ======================================== ================== 27 29 99.1 32 GGCTCCCCCGCGCTCGCGGGGATAGACCC # Left flank : AGAGCAGCGCGGCAGGTTTCCGAACGGCCGGCGGAAAACGTCGAGCGAGTCACACGCCGGTTGATCGGGCGGACACTCACCAAAGAACGTATCATCTCCGAGATGATCGAGCGGATCAAGGCGCTGATCGAGGGGCGCGATTAATGCCGCTGACAATAGTGGTCACACGGGACGTAGAAGCCCGGTATCGCGGCTTCCTGACATCGGTGATGCTTGAGATCTCTGCCGGTGTCTACGTAGCTCCGGACATGTCGGCGGGCGTGCGAGCGCGGGTCTGGGAGGTCCTCCGTGACTGGTGGGAGATGCTGGGCCGCGGCGCCATCGTGATGGTCTGGCGGGACGGCGGAGCGGTAGGCCATCTGTCGATGGAGCACCTGGGAGATCCCCCCAAGGAGATTGTGGACGCGGACGGGATACTTCTTGTAAAACGAAAATGAAGGTGGATTGCTCGCTTCACTGCTCTTTGACATTCGAATAAACTCAGCACCTTAAGACGGAGG # Right flank : CCACCTCGCCGCCCGCGCAGTTGCCCGGCACAAGGCTCGCGCGCGCGGGGGGATAGACCTCCCACACGCGCACGACCGCCGGCGCAGAAGCTGACGTTCCGTCACCAGCGAAACTCCAAGGTTCGGGGTGCCTAGCTCGGCTGCGGACCTAGAATGGGTTCCATGACGACTGCCGATCTTTCCAAGATCTTTGCAGGTTCTGGGCCACTGACCACGCTCGCATTCGCGAGCTTTGGAATCGTCTATTCCCCCGCCACCTCCTGTAGCGCTGAGAACGGGTCAAAGCAGCGAGTCGGCACGAGCCGACCCAGAAGATGGCGGGAGATGTCCGATACGAGCTTCGTATAACGTGCAACCATAAGGGCCGAGCACCTAGACCATCAGTGCGGCGGGCGGCGTCCATGCTCCCGCATTAGCCCCGACATCCCGGTCCCTTCGGACCGAACGCGGTTAGGACCCGAAGGCCCAGCACTCACCCACTGCGATGTGCCGACAGTGGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCGCTCGCGGGGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //