Array 1 108830-109592 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV795659.1 Corynebacterium sp. HMSC055G02 Scaffold52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 108830 29 100.0 32 ............................. AGTGATGGCGGCGACAACCACAGAGGGTGGGA 108891 29 100.0 32 ............................. CCTGGCACGTGAGATGGGCACAACGACGCGGG 108952 29 100.0 32 ............................. AAGTTGGCGTCCTTGCCGACCGTGCCGCCGAT 109013 29 100.0 32 ............................. TTCGGCTTTCCATATCGGTTTCCTGGTTTTCC 109074 29 100.0 32 ............................. AGGGAAGCAGGCGTTCGACGCGGCCTCGGCTA 109135 29 100.0 34 ............................. TTTGATGCGCAGTGGCAAGAAGCCGCCCCGTGCT 109198 29 100.0 32 ............................. AGAAGCGGTCAACGACAGGTTGGCGGGCACAT 109259 29 100.0 32 ............................. AAGCGCATCAGATTAATGAACAGGGCAAGCTT 109320 29 100.0 32 ............................. AGCTGAGTATAGCGTGACACTACACTAGAGAG 109381 29 100.0 32 ............................. ATCTAACGCTACAACGCCACTGCGAATAACCT 109442 29 100.0 32 ............................. TTGTCAATGGGTGGATACAAGTCCATGACTCT 109503 29 100.0 32 ............................. AGTTGTTGGCCGTGTGCTCCCCGCCCTGGCTA 109564 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================== ================== 13 29 100.0 32 CTCTTCTCCGCATACGCGGAGGTATTTCC # Left flank : TTCATCGAAGGGGCATGTTGAAAGAGATGATTGGAGTATTAATGGAGATTCTCGAACCGTATCTGCCAGAAAGAGACGATGACCGGTTGATTGCGGGACGGGGCGACGAAGTGGCTGGGCATACACAGTATGGAAATCGACCCCAGTAACAGTAGGTGCGTCCCTTATGTTTTTGGTACTTACTGCATCTAATTTGCCGGAACATCTCCGAGGGTATCTAACTCGTTTCTTAGTTGAAGTTGATACTGGAGTTTTTGTCGGTAACGTGTCGAGACGCGTTCGTGATAATCTATGGGGCCGGTGTAGCCGAGCTATAGGGGAGGGACGTCTAACGATGATTAATAATGATCCCACCCGAGAGCAGGGGTTCGCCGTAAATACGATGGGGAGTAATCGCCGAGTGATTCAGGACTTCGATGGTCTGTTGCTGCCTGTGACCTTATCTGCCGAAACTCGCGGACTTGAAGAAACTTCTTCGTAAAAACCGCAGGTCGGGAACT # Right flank : CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTACTCTTCTCCGCATACGCGGAGGTATTTCCTTCGATTTGTTATCTGTCTCAGACCACGGGAACTCTTCTCCGCATACGCGGAGGTATTTCCATGTCGAAGGCGGCGGCGGAGTTTATTTGTGACTCTTCTCCGCATACGCGGAGGTATTTCCTATGCGGAACGCAACGTTGTGCTGCGGCTCAACTCTTCTCCGCATACGCGGAGGTATTTCCGGCACCCTGTCCGGCACTCCGACCGCTGAGGGCTCTTCTCCGCATACGCGGAGGTATTTCCCGAAAATCGTGCCCATCTCAGACATGCTGGTGCTCTTCTCCGCATACGCGGAGGTATTTCCAAGTTCGCCGAGTTCCGTAAGTGGGCGGAAAACTCTTCTCCGCATACGCGGAGGTATTTCCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCATACGCGGAGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 2 109696-110700 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV795659.1 Corynebacterium sp. HMSC055G02 Scaffold52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 109696 29 100.0 32 ............................. TTCGATTTGTTATCTGTCTCAGACCACGGGAA 109757 29 100.0 32 ............................. ATGTCGAAGGCGGCGGCGGAGTTTATTTGTGA 109818 29 100.0 32 ............................. TATGCGGAACGCAACGTTGTGCTGCGGCTCAA 109879 29 100.0 32 ............................. GGCACCCTGTCCGGCACTCCGACCGCTGAGGG 109940 29 100.0 32 ............................. CGAAAATCGTGCCCATCTCAGACATGCTGGTG 110001 29 100.0 32 ............................. AAGTTCGCCGAGTTCCGTAAGTGGGCGGAAAA 110062 29 100.0 32 ............................. ATCGCGGAGAAAATCACCGAGTGGATCAACGG 110123 29 100.0 32 ............................. AACCCTGGGTCGTCTACCGCACTAACGGCAAG 110184 29 100.0 32 ............................. CTGTGCCCGGAAAGGCGCATGCCCCTCCAAGA 110245 29 100.0 32 ............................. AACTTGCACTGCTCTAGCCTCCTCGAAATAAG 110306 29 100.0 32 ............................. AGGTTCTTCGAGTCCTTCACGGTCACCTTCGC 110367 29 100.0 32 ............................. CTCGCCGGTGTACCACGCCGCCATATCAACGA 110428 29 96.6 32 ............C................ AGTCCCGCGCCAGCCCCTTTTCTTTTTTCGAG 110489 29 93.1 32 ............CG............... GTATAACCCCGCGCCGTTAAATCAGCAACAGC 110550 29 96.6 32 ............C................ CCCAGCCGGGAGGAACGGGTTCGGCCACACGT 110611 29 96.6 32 ............C................ ACCGTGCAGTCCCCGGCGGATAAGCCACGCCT 110672 29 89.7 0 ............C...........G...T | ========== ====== ====== ====== ============================= ================================ ================== 17 29 98.4 32 CTCTTCTCCGCATACGCGGAGGTATTTCC # Left flank : CTCTCTTCTCCGCATACGCGGAGGTATTTCCAGAAGCGGTCAACGACAGGTTGGCGGGCACATCTCTTCTCCGCATACGCGGAGGTATTTCCAAGCGCATCAGATTAATGAACAGGGCAAGCTTCTCTTCTCCGCATACGCGGAGGTATTTCCAGCTGAGTATAGCGTGACACTACACTAGAGAGCTCTTCTCCGCATACGCGGAGGTATTTCCATCTAACGCTACAACGCCACTGCGAATAACCTCTCTTCTCCGCATACGCGGAGGTATTTCCTTGTCAATGGGTGGATACAAGTCCATGACTCTCTCTTCTCCGCATACGCGGAGGTATTTCCAGTTGTTGGCCGTGTGCTCCCCGCCCTGGCTACTCTTCTCCGCATACGCGGAGGTATTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTA # Right flank : TCAGGTACCAAGCGTCAAGCTCGCCACCTACCTTGTGGCTCAGCCTTAACCCCCTACCGCTTTCGCAGCACCAGCACCAGGTTCGACACCGCGAACTCACGTAGCCCCGGCACGTGAACCATCCACCAGGCCCACCACGGGTGGTAACGCGGAAACGCGGCCAGCAGTTCACAGTCGCCGGCCTCCGCGGCAGCGTGCGCCCACTTCAAACCTTCACCGCAACCGACCTTGAACAGGGACTCGCCAAAGTAGTTCTTCGGCCGCTTGCCGTGCTTCTTCTCATACATGCGCCGCGCGCGGTCGCCACCCAGGTAGTGCGTCATCCCCATCTCGTGACCACCGAATGGGCCGTACCAAATGGTGTAGGAGTAGACGACCAGCCCGCCCGGCTTGGTTACGCGCAGCATTTCCTCGCCCATCGTCCATGGCTCGGGCACGTGCTCGGCAACGTTCGATGAGTATGTCAGGTCAAAAGCATCATCGCGAAACGGCAGTTCCAG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCATACGCGGAGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA //