Array 1 2367910-2367159 **** Predicted by CRISPRDetect 2.4 *** >NC_009706.1 Clostridium kluyveri DSM 555, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2367909 30 100.0 36 .............................. AAGAATTATTAAAAAGAATAAAAATGCATATCCTAG 2367843 30 100.0 34 .............................. GGAGTACCAGACAGGATTGTTTTAATACCACAAG 2367779 30 100.0 36 .............................. AACATGAGAAAATAAAATGTTGATTAATATAGGAAA 2367713 30 100.0 36 .............................. TTAAATTTCCTCCTTATAATTCCATAATCTTTGCTG 2367647 30 100.0 35 .............................. ATCTATAAAGAATAGAGGAATTGATGGGGATACAA 2367582 30 100.0 37 .............................. CTAAAATACTACAAGGTGATATTCAAAAATATAGTGT 2367515 30 100.0 36 .............................. AGAGCTGCCAAAATGGTTAAGTCCTCTTACTAAAAA 2367449 30 100.0 35 .............................. AAGATTAAAAACTTTAGGTAAAAATATTGGTAATT 2367384 30 96.7 36 ......T....................... AATGCTTATGGATATTTGGCTTTTCAGGCAGTATAA 2367318 30 100.0 33 .............................. GAACACAATTTTATAAGGTTAAGAAGGTGGTTG 2367255 30 100.0 36 .............................. CCATTTTTAATCCTTAAAGATTTATCTTTACTGCTT 2367189 30 80.0 0 ................AT...A.AAA.... | C [2367167] ========== ====== ====== ====== ============================== ===================================== ================== 12 30 98.1 36 GTTGAACCTTAACAAGGATTGTATTTAAAT # Left flank : AAGGAGCTTTTGTATATTTCGACCCTCCATATGATCCTGTATCAAATAGTTCGAATTTCACTGGCTATGCTAAAGGGGGATTTAATAGGGATGAACAATGGAGACTAAGAAATGTATGTGATAAATTAAATTCCAAGGGAATTAAGTTTCTACTGTCTAATTCTTCAACAGATTTTATTTTAGATTTATATAAAGATTATAATACTAAAATAATACAGGCAAAACGCTTTATTAATTCTAATGGAAATAAGAGGGGAGAAATTGACGAGGTTCTGGTGAGAAATTATGGATAATATATTTAAAAATAAAAAGAAATAGTTAAATATTTTTCCAACCGACTTCTAAAATAAAAATACCTCTATTCATTTAAATACAATGTTTGAGGCTTTTTTTATGATGATTTTGAAAAATAAAAAACGGTTGGAAAAATTTCGAACAAACTCTTTATTGCCAATGTATTTAGGGTTATAATAAAAATAAAGAATGGCTAATTTACATTG # Right flank : ATGATTTTGATACAGCATGGAAGACAATATTGGAAACCTTTGAAGTAGAAATAGTAGAACTGCTTTTTCCAGAACTTTTTTGTGAAATAGCATGGGAACTTGGAACAGAGTTTTTGGACAAAGAATTAAATGAAATACAAAAAGAGATATTTGATAAAGAGAGTAGTGAAAAAATAATTTCGGATAAAATCATAAAAACCAAATTAAAATGTGGGAGAAGTAAAATACTATTTATACATGTGGAGGTACAAAGTTACAGCAGTGGATATGAAGTTTTTGGGGAGAGGATGTTCAGATATTTTTACAGGATATGGGATAGATTTAGATATAAATATGATGACAAGTCGGAAATAGTGGCAGCAGTAATCTATACCTATAAAAGAGAAAGAGGAAAAGATAAAAGATATGTATATAAATTGCCGGAACTTTCAGAAGATGTACTTGTATATAATTTCAGGACTATGGATGTTGAACAAATAGAACTTGAAAGTATAAGGAAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACAAGGATTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 2823766-2822947 **** Predicted by CRISPRDetect 2.4 *** >NC_009706.1 Clostridium kluyveri DSM 555, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 2823765 30 100.0 36 .............................. AATCTTAACAATATAGAAGTAGAACTGTGTAAATAT 2823699 30 100.0 36 .............................. CAAAATACCGAAGGGGACATTGGTCTTCCTCGGAAA 2823633 30 100.0 35 .............................. AAAGGTATGCTATATACATAATTCCCTCTGCAATA 2823568 30 100.0 36 .............................. TGATTTATCCAGATGAATTTGAATTAGATGAAAATA 2823502 30 100.0 36 .............................. AGAAAGGAGTGTTGGTGATACAAAGTGATTTATAAG 2823436 30 100.0 36 .............................. AAATTAAAAGTAATGGCCCTAGCGCCGCAGCTATCC 2823370 30 100.0 36 .............................. TTTAGATAGAGGAAATTATATTGTTATTCGTAAAGG 2823304 30 100.0 35 .............................. AAATAAGTAATGCATATTGATTCATCTATTTATCC 2823239 30 100.0 36 .............................. TCTACAGCTTGTTTGTTATCTATTACCAGTACATTA 2823173 30 96.7 36 .......C...................... ACAACTATCTTCTTTTGTTTTATGTATTCTTTTATA 2823107 30 96.7 35 .......C...................... GAAAGGTATAAGGGAATTTGCGTCTATAGCATATA 2823042 30 96.7 36 .......C...................... TGCATTGCAATATTCTGGAGCATTGGTAAGAAACTC 2822976 30 86.7 0 .......C.........T..A......G.. | ========== ====== ====== ====== ============================== ==================================== ================== 13 30 98.2 36 GTTGAACTTTAACAAGGATTGTATTTAAAT # Left flank : TTAACTACTTTAAGTACAAATACTGCATTGTATCCTTGCTCTATATACTTTTTAGCTATTTCTACTTTTTCCTTAATTGAGGGTTTGATTTTTTTATTAAATCTCTAAGAATTGCTATTTCTAAATCTTTTTCTCCTAACAATTTTTTTAGATGATCATTTTCTTTTGTTACCTCTGTCAGCTCATTTTCAAGTTCTTTTTCTCCCTCAACTAAAGCTTTTCTACCAGGCTTAATTTTAATCTCATCCTTATCCTTAGAATTCCTTATCCACGTAAATATAGTTGATTTTGAGAGCCCATGTCTCCTTGATACCAGTGAAACATTTCCTACTTCTTTCACTTCTCTTAATACCTCTTCTTTTAATTCTTTCGTATAACTTTTTCCTTTCATAGTTTACCTCCAATCACTTTCTACATTATAATAAATATAGATGTAATGGTCCAAACCTATTTAGGGGCTTAAGAGGTAACATTTGTGATTACTGCAAAAGGTGCTGATG # Right flank : GGAAATGATTTTCTTTGAACCCCATAACTATAAAAGTCACTGATGTTTATTTCACTAGTAGTTTCAAATCATAAACTTACTTAATGCTAAAAATTTGAAAGTAAAGGAAGTGTAATTTTTGTGTTAACGTTGATTGTATGTGAGTAGTAGATGTATTGTCATTAAAACTCATATTTACAATTCAAAATTATATTGATGGAAAGTATATTTATATACCAAAGAATGTAATGGAAAAATCCAGGGGAGAATTAAAATGAAATTAAATATCAGAAGGTTGACAATAATACCTTTGAATCTAGAACAATTCAAGGTATTGTTTGATGTAATATATATGACAGAAGTCGTAAAAAGTATGTGTCAATGGGCATTGAGTGATAAGAAGGTTTTAAGAGTTATTGCCGGAACAGATAAAAACAATATTGCTTCTCAAAGAGTTTTGAAGAAATGTAGTTTTATAATATATGATGAAGACCATGAAAATTATTTATGGCAGTTAAATA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACAAGGATTGTATTTAAAT # Alternate repeat : GTTGAACCTTAACAAGGATTGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 3 2825616-2825194 **** Predicted by CRISPRDetect 2.4 *** >NC_009706.1 Clostridium kluyveri DSM 555, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2825615 30 100.0 37 .............................. ACCTAATATTGATATGGCACCTCTTACAGCAACTACT 2825548 30 100.0 34 .............................. TCTAAATTATGTATTTCTTCTATTAAATCCTTGG 2825484 30 100.0 36 .............................. CATAAGAGACAACGTTATATTTGTAGTTAATTCAGA 2825418 30 100.0 35 .............................. CAGGCTCTTGAGATGTTTGAAAAGAACTTTGCGAG 2825353 30 100.0 36 .............................. GGACACAACCGCAGTTTTAGGAGAGTTTGCAGATGC 2825287 30 100.0 34 .............................. CCATAAACGGGGCAACCCTAGTAACTATGTACAA 2825223 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 100.0 36 GTTGAACTTTAACAAGGATTGTATTTAAAT # Left flank : TTAATTTAAAGAACATGATGTAGTAAGGAGGATTTTTGTGGGGAAAAATTTTAACTTCAATTATGCATTTGTATTTTATGATGTGAATGAGAAAAGGGTTAATAAAGTTTTTAAAATATGTAAAAAATATTTCCATCACCATCAAAATTCTGTTTTTAGAGGGGCCATAACTCCTTCAAAACTTATAAAATTGAAAAGTGAATTAAACAAGATTGTGCAGGATAAAGACTTCGTTACAATTATAAAGCTTATAAATGACAGTTGTTTTGATGAGGAAACTTTGGGTATAAATGAAAAGAATACGGAAAATTTAATACTTTAATTTTTCCAACCTCATAATAAGGTAAAAGTGGTGTAATGTTATCAAATCACTAGCATTACACCACTCTTTATATACATTTTATAAAATATGAAAAATGGTTGGAAAAATTTCAACGAAAGCCTTTATTTATACGGTTTTAAGTAATATAATAAAAATAAGAAATAGGCATTTTACATTA # Right flank : ACAGTAACGGATTAACCCCCTCGTTTTGGACAGAATCTAATAAATTCTTCATTTCTATTAAATTTAGACCCTTATTTGAATGTTTGTTAGGTTTTCTTCAAAATAAAGGTTATAAAATTCATGTGGAGCCATAAATCTTAAACTTGAATGTAATCTCCTATTATTGTAGAATTCCATAAATTCATTTACTATTTTGTATGCTTCTCCATAGCTTTGAAATTCATTAATTTTTAAACACTCATCCTCAAGTATTCTGTGAAATGATTCTACATGTGCGTTTTTATTTGGCGTCTTCACTGGTATTCTCTCATGTTCAATTTTAAGTTCTTCACAGCATTCATCAAATTTATGACTTATAAACTGGGGTCCGTTGTCTGTTCTTATTACTGGCTTTTTAGAGTCTTCCTCAAACAAGTTTCTTCTTATTAAGCACTTCCTCAGTAGTGCTGCAGCATCTTTAGCCTCACAGTGTAAACCCATGTGGTAATCTATAATGCTCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACAAGGATTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [66.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 4 2836692-2835087 **** Predicted by CRISPRDetect 2.4 *** >NC_009706.1 Clostridium kluyveri DSM 555, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2836691 30 100.0 35 .............................. TGAACGTATTCAATTTTTATAATTTTTACTATTTA 2836626 30 100.0 36 .............................. TAGAGGGTGACCTCTGCGAGAAGGAAGTTTTTGTAC 2836560 30 100.0 36 .............................. GCATAGACCCCATAGTAACTATTATAGGTGAGGAAG 2836494 30 100.0 36 .............................. GGTATAATTATGTCTGCTGTTTTCCACTCTGGAAAT 2836428 30 100.0 37 .............................. CTAAAGATGAATTGACACTAAAACAATGGATTAAATC 2836361 30 100.0 37 .............................. CAGAAGGTAAAATAGCATTTAATACAGGCGGTACTGG 2836294 30 100.0 37 .............................. CCTCTTTTCTAAGTACGGATTTTCCTTGACTATAAGC 2836227 30 100.0 34 .............................. AAAAGAAAAAGGAGGCATTAATAACCCAACTAGG 2836163 30 100.0 37 .............................. TTACTTTCTGGTGTGTTAGTATTTTCTTTTGCTTCAG 2836096 30 100.0 34 .............................. GTAGAGGAATTAAACACAAAGATAAAAAACATAG 2836032 30 100.0 36 .............................. AAAGTATTGATTCTTCTGCCTTTGCTAAATTCCATA 2835966 30 100.0 35 .............................. GGGGAAAGAAGATATGAAGCACTAAAAATGTTATA 2835901 30 100.0 37 .............................. CAAGTTATGCTGAACACTATCCAACTGAAATGACTAA 2835834 30 96.7 36 ......C....................... TTGTTAGAATATCCTGTGATAATTTGAAATACAGTA 2835768 30 96.7 36 ......C....................... AGGCCTATAACGAAAGTAAAATAGAAGAACACAGGA 2835702 30 96.7 36 ......C....................... GACAAAATAGCAGTAACAGACATTGAAAAGATCGAG 2835636 30 96.7 36 ......C....................... ACTCCAGAAAGGAGATATTTAATATTGATCCTAAAT 2835570 30 96.7 35 ......C....................... GATGGGTTTACAACCAAAAGCACATTTTGTACAGG 2835505 30 96.7 36 ......C....................... CAATGGCTGGCTGCTGCACTTGCAATTACAGGTCAG 2835439 30 96.7 37 ......C....................... AAGCTGATACCTGAAATACAAAACTATATTGACTTAG 2835372 30 96.7 36 ......C....................... TTAGGATTGCTCCATAACTCAAGGCATCTCTTAATA 2835306 30 96.7 36 ......C....................... AATGGTAATAGATGCAGCTCCAGAAGCTTTGGATAC 2835240 30 96.7 36 ......C....................... TGCCATAGAAAAAACTGATGATATGATTCAATATGA 2835174 30 96.7 27 ......C....................... ATTTTAATGGTAAATGTTTAAATTTAT Deletion [2835118] 2835117 30 80.0 0 ......C.........TG.....AA..T.. | A [2835092] ========== ====== ====== ====== ============================== ===================================== ================== 25 30 97.7 36 GTTGAATCTTAACAAGAATTGTATTTAAAT # Left flank : CTCTTGTGCATAGAAATTACAGTATTTTAGGTTCTAAAATAAGAATTTTTATGTTTGATAATCGTATTGAATTTCATAGTCCGGGGAAATTACCTAATACTGTTACTATTGAAAAGATGAAAATTGGAGTGTCTTATGCAAGAAATCCTTTCCTGGTAAAATATATGGAAAATATGAGATATATAGATCAATTGGGAAGAGGCGTTCCTATGATTCTGAAAACAATGAAAGATTTAGGGGCAAGGGAGCCACTTTTACAGGAATCAGGAGAAGAATTTGTTCTTACTGTGTATAAAAAATAAATTATATGAAAAAGTCATTATATTTTCCAACCTCAATTCCAACTAAAAGTGCTGCGTCCGTTGAAATCCAATGGATTACAGCATTTCTTCTATGTGATATTCAAAAAATCAAAAATGGTTGGAAAGATTTTAATAAAAGGCTTTATCTATGGTGGTTTAAAGGATATAATAAAAATAAGAAATGGCTATTTTACGTTA # Right flank : GAGCAGAATATTATATGTTCGAGAGTTTTAAAGCTAATATTACAATCAATTTTAATGGTTAAGGTTTAAAACATAATTTAATATATCTTCGCATAGTATTTAATATACTTAGAAAAAATAAAAGGGGGGGAATACATGGATAAATATATCATTTTTGATATTTTCATAATATATTTAATATTTTTCACGAAAGATTTTAAAATTACTATAAGTATAACATCAAAAAGATAAATTTTGGTCAGTGGTTCAGTTAAAGCGTATATACTCTGCATCTAAAAATAATATATAGGTGTAGAGCTTTTAGTTCAATCTAAAAAATTTCCTTATAATTCATCATGTTTCTGTAAAATATTCTAACAATTTTTAAAATAGTGCAGGATTTGTTAAATTGAAGTAGAATTTATAAGTATATAACTATTATGTAAAAGGAGAATACATATGGAAGTATACGAAATTAATGTTAAAATATATACGCTTGAAGATATATTTAAGGAAGCATC # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.82, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAATCTTAACAAGAATTGTATTTAAAT # Alternate repeat : GTTGAACCTTAACAAGAATTGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 5 3579857-3578641 **** Predicted by CRISPRDetect 2.4 *** >NC_009706.1 Clostridium kluyveri DSM 555, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3579856 30 100.0 36 .............................. AACTGTTGGTACAACTAATCTTATGAGCATTTTCAT 3579790 30 100.0 34 .............................. TTTAATTTCCTCCCTAAATTATATAATTTCCAAA 3579726 30 100.0 36 .............................. TCTTGTGGGGTATCGTCTTTCTTTTCTTGTAGGCTT 3579660 30 100.0 36 .............................. AACAGCAAAACTGTTTGGAGTCCCATGGAAAGCCAT 3579594 30 100.0 35 .............................. TGACCTATGGATACCTGATAATAAGTTTGATGCAC 3579529 30 100.0 35 .............................. GCTTTTTTTGCAAGTTCTCTTGTGCTTAACTTTAA 3579464 30 100.0 36 .............................. TATAAAAGAATGTGGAGTTGTAGAAACTGAATTACC 3579398 30 100.0 36 .............................. ATGGCAAAGAAAGACCATTACAGATGTTGTTGCATT 3579332 30 100.0 35 .............................. TAAATAAAACCTTGAGAATTAATAAAATCATCTAT 3579267 30 100.0 36 .............................. TACCTAAAGTTATTGGTAAAGTAAAAAAGCTTTTTA 3579201 30 96.7 38 ......C....................... TAGATGTAAAATTGATTAGCAGAAGTATCAGTATTCTT 3579133 30 96.7 35 ......C....................... TATACTTTATAATCTATAGTATTAAGCCAATTTCT 3579068 30 96.7 36 ......C....................... GTGATTTAGCAATGTCTTTAGGTATAAATAAGTCTA 3579002 30 96.7 38 ......C....................... TATATCTTTCCATGAGAATTGAACACATCAAGTCTCCA 3578934 30 96.7 37 ......C....................... CCCTGTAGAAGTTTGAAGGTTTTTTATGTCAACATCC 3578867 30 96.7 36 ......C....................... CCATAACCAGCATTAGATATTTCATCTTTGGTAGCA 3578801 30 96.7 35 ......C....................... ATTTCATTTTCCATACTGTACCTTCTTAGTTTTGC 3578736 30 93.3 36 ......C.....T................. TCTTCTACAAAAGTTTCATATTCGAATTTAACATCT 3578670 30 80.0 0 ......C.....T...GGC......A.... | ========== ====== ====== ====== ============================== ====================================== ================== 19 30 97.4 36 GTTGAAACTTAACAAGATTTGTATTTAAAT # Left flank : GTGTTTTCACTATAACCATATATTACATATTACGAATGTTTTAATTCCAAATTAATTCCCTCAAAGCCCATTGAAATAATAGCAGTAATTTTTCTATTTACCGTTTGATTGATCTGGAATTGTTTTTAGTAAGTCGACATAATTGAATGAATTATATTCATTTAGAGCAGGAAATGTTACAGGGTTGTACCCATTAATAGCATAGTTATCTATTATTAAAATTGAGATGATATTAAGGAACCAATATAAGTATTCTTATAGACATTAACCATTATGTTCAATTTATCGCATTTTATATTTATTTTTAAAATCCCCGTTAGTATTTTTCCAACCTTAGACAAGTAAAAATCTTATATAAACTGTTGATATACAATGCTTCCAAGGCGATTTTATTCTTATAAATACAGAAAATAAAATTGCCTGGAAAAATTTTTATAAAATCCTTTATTTTCAATACTTAAAGAGATATAATGAAAATAAGAAATGGCTATTTTACATTA # Right flank : GTTATACAAATATTTGATTTTATTCCAATATATATAAGAAAGCTATAGTCACCCTCAAAATGGTTACTAACCTAAAAACCTTCCATATTAAAATTAACGAGGATTTAATCGTAAAAAAGAGAGCTTTACGTTTTCAAATTCTTTCCACATATCTAGAAACCAGTATAATTTTACTTTCCTAAATTGGCTAATAATTCCACATAAATTTCAAGCTATCTATAATTTTTCTTCATCTCTTGAAATGCTGTATCATATATCTGCTAAATAATTCTTTATCAAAAATATGAAATTGACTCATAGAGTTACTCTTTTTTCTAATATGATATTTTTTAAAATGTAAACAATCCCTAATTATAAATCACATAAAGTTCACATTGTTATTACATAATGTAACTACAATTAATACTTATAATTTTTTTAGAGATTAGGTTAAGTGAGATATAGAGATATTCAAATATAGAATAGTTTGTAGTGTATATAAGTATAATTAGAAATTTAAA # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAACTTAACAAGATTTGTATTTAAAT # Alternate repeat : GTTGAACCTTAACAAGATTTGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //