Array 1 9846-11593 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNNA010000009.1 Alistipes shahii strain BSD2780061688b_171218_A10 NODE_9_length_119241_cov_57.388, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 9846 36 100.0 29 .................................... GGAACGGCACCTTGACGGCCGGTGCGATA 9911 36 100.0 30 .................................... CTGTCGAGCTGAAGTGGATAGCCTTTCTTG 9977 36 100.0 30 .................................... TATTGGCGTGTTATCTCGGTTCGCATTTCG 10043 36 100.0 30 .................................... GTATGCCAAAGCACACACATAATAGCACTA 10109 36 100.0 29 .................................... TATTGGCGTGTTATCTCGGTTCGCATTTC 10174 36 100.0 30 .................................... TAAAAGTGTCCAAGAGCTCCGAGACGCCCT 10240 36 100.0 30 .................................... CATAGCCATATTTGCGATTGTGGAACGCTT 10306 36 100.0 30 .................................... TGCTCTCCCTGCTCTCCTTTAAGTCCTTGT 10372 36 100.0 30 .................................... TAACCATGTGACACAACAACCATGAACAAA 10438 36 100.0 30 .................................... CGTGCGAATGTTGCATGAGCCTGTTGCGCA 10504 36 100.0 30 .................................... ACAACGACGACGCTAATTTAAGGGTGTGGC 10570 36 100.0 30 .................................... TCGAAGCCTTATCAATAGCGTCCCACACCT 10636 36 100.0 30 .................................... CCTTCGGCGTGAAACCGACGAGAGGCAGGG 10702 36 100.0 29 .................................... GCTGAACCATGACGCGTTGCCGTTTGCGT 10767 36 100.0 30 .................................... TGGAAATCGTTCATTGTTTGCAGTCGTGTC 10833 36 100.0 29 .................................... GCTGAACCATGACGCGTTGCCGTTTGCGT 10898 36 100.0 30 .................................... ACGGGGAGGGCGGAATCGCAGATATTACAA 10964 36 100.0 30 .................................... ACCAAGCAGGTCTGGGAATCAAAACGTATC 11030 36 100.0 30 .................................... TCGCTTTTGCATTCTTTTTCCAGTTTATCG 11096 36 100.0 30 .................................... CGATGCAAATGTATAAAAAAAACTTTATAA 11162 36 100.0 30 .................................... TTCGCTACATATTCTGTTATGCTGTTTTGA 11228 36 100.0 30 .................................... TCTTCGGGATTTCGTGAAGAAGCGCTATCC 11294 36 100.0 30 .................................... TTTTTCAAATTTCTTGCAACGCTGCACGGG 11360 36 100.0 30 .................................... TACCCGCGCCTCGGCGGTGCAGGTCGATCC 11426 36 100.0 30 .................................... TCGGCTTTCCGTGTGCATCGTGTGCGGGCC 11492 36 100.0 30 .................................... GGGAGGATGTCTTGGATCAGCATAGCTTTG 11558 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 100.0 30 GTTGTATCTTATTGAAATTCTACATCAAACCACAAC # Left flank : GTAATCTACAAGAACAACACCAGCCCTTTATGCCTGCTTTTCTTCCATGATAACCGCAAGAAATCGGTTGGTTTGGGTGTTTCCGTAGTCCGTTCCTGCTGGGATGCACAAGCACAAAAGGTAACGGACGACTGCCCTGACAGGGACGATATTCAGTTTCAGATAACAGCCAAAATCAAAGAGTACGAGAAGAAGATTAAGAAACTGGAAGCCCTCGAAATCCCTGTAACCTTTGAAGCGCTGTTTGAGACCATTGGTAAGCGTATGGATTGTACGGTAGGCTATTATTTCAGACAGATAATCGACAGATTGGAAAAGGTCGAAAAGTATGGTTCCGCCAGCAAACACAAGGTAACACTTGCCCTTATGTCGCAATTCCGCTCGGTCAATATGCGTTTTGATGAATTGGATTTGACGTGTTTAAGGGAGTTTGAAATCTTCTTGAGTCAAAAGGGTAATGTAAACAACAGCTGCAATTATGCAGCATTCCAATACTGACA # Right flank : CGTCGGGCCTCATATTGATTGATAAAGTGTTACTTACGGGCTGTCTGCCACTATAAAAATACGATCGGGTGTTCCGACGAAGCCAGTTTGATGCATTTTCCGTATTTCAAAGAACGAAAATAACGATTTATCAGAAAAATTCCAATTGTTGCGGAATTTCCGGTTTTGCTCGTTCGCTTTTACCCCAAAAATTTAATATGTCTCCATACTGTTTGTCCGTTACAGCAAGAATACTTGTAAATCCTGTCGGAGGCATCGATCGTCGAACCCGCTTAATGTGAACCTGCATATTCTCCTTCGATGCACAATGGCGCACATAGACTGAATACTGCATCATTGTGAAACCATCTTTTTCCAACGCCTTGCGAAATTGCACCGCATGACGTCGTTCCGTTTTTGTATTGGTTGGCAAATCAAAAAAGACAAACAACCACATGATTCGATAAGCATTCAAGCGTACTTCTGACATTCGACTACTCCAATAAAGGATATGCAATCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTATCTTATTGAAATTCTACATCAAACCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //