Array 1 1233113-1231427 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016680.1 Neisseria meningitidis strain M22822 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1233112 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 1233046 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 1232980 36 100.0 30 .................................... AGGGGTCGTGAATGGAGTTCTTGCAGTTCG 1232914 36 100.0 30 .................................... TAAGCGTTTCTTTTTTGGTCTGCTTCTGCT 1232848 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 1232782 36 100.0 30 .................................... CGACAACAAAGCCGTCTATGACCTGACCGA 1232716 36 100.0 30 .................................... CACCCTGATATTCCGCAACTCGATATACTG 1232650 36 100.0 30 .................................... TTGGGAGGTGGAAAACCGAATCCTGCACGA 1232584 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 1232518 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 1232452 36 100.0 30 .................................... TCAGCCTCAAATACATCCGCCAAATCGTTG 1232386 36 100.0 30 .................................... ACACAATCTCCGCCGTTCCAATCAAATGTG 1232320 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 1232254 36 100.0 30 .................................... AATGATGTATATAAAATGCCGTAAAAAATG 1232188 36 100.0 30 .................................... CGTCTGAAGGTTTGCCCATCTCCTGACAGG 1232122 36 100.0 30 .................................... TCGATTGTCTATGAAAGCACTTGATGATTT 1232056 36 100.0 30 .................................... CTCTTCATTGAAGAAGTTATAAGCCTTTGT 1231990 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 1231924 36 100.0 30 .................................... GCCTGCGTACTTGGTACGCTGGTCGCCTCC 1231858 36 100.0 30 .................................... TTCATAGATCGATGCATGAGGTTTTCATGG 1231792 36 100.0 30 .................................... AGGTCAAAGTGTCAGGCAAATTTAAAGGTG 1231726 36 100.0 30 .................................... AAATCCATTTATCGCCCACCCTTTCCGGCC 1231660 36 100.0 30 .................................... TGTAAATGAGGTTATTGAAGATGCAAAAAG 1231594 36 100.0 30 .................................... TTTTCCAAAGCGTAAAATCACATTCGGGGC 1231528 36 100.0 30 .................................... AACACTGATAGGGAATGTACCCTCGATAGT 1231462 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.7 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //