Array 1 196016-200427 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHFW010000003.1 Acinetobacter baumannii strain Aci00738 isolate Aci00738, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 196016 30 93.3 30 ............................AG CAGAAGAACGCAGAAAAGCGAGAAGCTTAA 196076 30 96.7 30 ............................A. CTTGAAAGGCTTGAGCTTAAAGCTTTTTAC 196136 30 96.7 30 .............................A CAGCTGGCCGCGTATATAACGGCTCAGTAT 196196 30 93.3 30 ............................AC AACTCGATGTTGGGTATGCAGAGAGCCTTG 196256 30 93.3 30 ............................AA ACTTACACTTCTCAGCGTCAAACCATGCGT 196316 30 93.3 30 ............................GA TTACATCCACGAAAAGAGCTTTAATCAGGA 196376 30 96.7 30 .............................G GCAGAACTTTTCATGACGCTCATTCTCTAA 196436 30 96.7 30 ............................A. ACCTATCAACGTTAAACCAACGATTGCCAG 196496 30 93.3 30 ............................GA TGCAGAAGATGTTTTAGAACGTTATGACGA 196556 30 96.7 30 ............................A. TGGGATGTTATGAATATTCGACATTACCAA 196616 30 96.7 30 ............................A. CAAAATAGAGTTGGCCTTCCTGTTTGGCCT 196676 30 100.0 30 .............................. CAAACGCTTCAACCAGCCACGTCTTTGAAG 196736 30 96.7 30 .............................C TTCCGCCAAATTCTAGGAGGTTAACATGCT 196796 30 100.0 30 .............................. GTGCATACTTATTGCCGCCAGCAAGTAAAC 196856 30 96.7 30 .............................C CTTCGGGAGGTTTTCTTTTGGGGTGATCAT 196916 30 93.3 30 ............................AA GTTTCGGCCTAATGGATGCGGTCTTGAAAA 196976 30 93.3 30 ............................AA GGACTATCCGTCCCTTTGCCGTTTTTGTAC 197036 30 93.3 30 ............................AC CCTCGGGTGGTTTTTTATTGAGGTGATCAT 197096 30 93.3 30 ............................AG TGGCGCGTTCAAGCGTGCCATTGAAGCATA 197156 30 93.3 30 ............................CA GAAGTAAGTCTTGCAGATGCACGATCTAAA 197216 30 96.7 30 ............................A. CCGCCGATAAAACCCTTACCCGATACGCCC 197276 30 96.7 30 .............................C AGCTCCCGATTCAACATCCAACAACATGCT 197336 30 100.0 30 .............................. TGAAAGACTTGAACGTGGTCAAGTCCTCCT 197396 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 197456 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 197516 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 197576 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 197636 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 197696 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 197756 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 197816 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 197876 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 197936 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 197996 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 198056 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 198116 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 198176 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 198236 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 198296 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 198356 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 198416 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 198476 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 198536 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 198596 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 198656 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 198716 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 198776 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 198836 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 198896 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 198956 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 199016 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 199076 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 199136 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 199196 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 199256 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 199316 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 199377 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 199437 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 199497 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 199557 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 199617 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 199677 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 199737 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 199797 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 199857 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 199918 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 199978 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 200038 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 200098 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 200158 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 200218 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 200278 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 200338 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 200398 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 74 30 95.6 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //