Array 1 14473-15966 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDHW01000236.1 Pseudanabaena sp. SR411 Contig_244.264, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 14473 37 100.0 36 ..................................... TACTACTGGTAACTCTGCATCCATGATCGCCACCAA 14546 37 100.0 35 ..................................... AAGCTGTATTAAGATGTTTTTAGAGACATTTGGAT 14618 37 100.0 40 ..................................... ACTTTCATAATTTGGGCAATCTGTTCATACTTCCGACCTG 14695 37 100.0 34 ..................................... CTAGTAGAGAATTGATTGGATAGGCGATCGCTAC 14766 37 100.0 39 ..................................... CTCACGATATCCCGCTTATACGCGACAGGGAAGAGGAAA 14842 37 100.0 33 ..................................... CAATTGCATACAGCGCTTCGGAAACAGTTCCTA 14912 37 100.0 34 ..................................... TATAAAAAAGATTTTCGCCAAGTTGTTTGGAAAT 14983 37 100.0 35 ..................................... AAAATTGCCATGGCAAATATATTTCAGAAGATTTA 15055 37 100.0 34 ..................................... AGTGGAATGAATTAGTGCAGTGGCGCAAAGCGAT 15126 37 100.0 36 ..................................... TAATAAATGCTATTCAGACTTAGAGCTAAAGCTATT 15199 37 100.0 34 ..................................... TCGTCGGAAGCCGACGATCACTCGTGTTGCGGCT 15270 37 100.0 41 ..................................... ATGAGGATGCTATCAAGCAACTCATGCTGATTGGCAAGTGC 15348 37 100.0 41 ..................................... ATGACCCAAAGATTAGTGGCTACATCAACTAAATCTATACA 15426 37 100.0 34 ..................................... TAAGTGCGATCGCCTCCACATTGCCCTTGATTCG 15497 37 100.0 35 ..................................... AGCCAGTAAGACAGGTGAGACGGCGGTGCGATGCG 15569 37 100.0 35 ..................................... GTAAGTGACGGTTGCTTCTTCTGCGAATGTGGTTC 15641 37 100.0 34 ..................................... CAGATATCGCGTATTGCTGCTAGACATTACATCC 15712 37 100.0 35 ..................................... TAAAGCCATCAACTCTGATTTCAAAATGTCTATCT 15784 37 100.0 37 ..................................... ACTGCCATATAAACTCCATCCCACCAGTACAATCCGC 15858 37 100.0 35 ..................................... GGGTCTAAGCCTATGGTAGCGACTAAGATGAAGGT 15930 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 21 37 100.0 36 GCTTCAAAGCCTCTGAAACCCTTTTAGGGATTGAAAC # Left flank : CCGTACTAAGATTCATAAGATACTCAAGTCCTATGGGCAATGGATGCAGTTTAGTGTGTTTGAGTGTGAGCTGACGGATGCTCAATATGCCAAACTGCGATCGCGTTTGAGTAAGTTAATCAAGCCTGATGAGGATAGTATCCGTTTTTATACGCTATGTGCTTGCTGTCAGCCTAAAATAGAACGTATTGGCGGTGAACAGGTGCGGGATAATACAATATTTTTCGCTTGATTTCTGGTTCATTGGTTGCGCGAGTTGGTGGATGTTTTTTTAATAGTATGCAATTTGGTATTTTACAAGTCTTGGTAGGTATGTTTTTGAGGGTGATCGGGCGAGTTGGTCGATTCGCGCAAGTCTGGAATGTTTTGGTAAATATAGTTTTGTATTGGTTGGTGGAAGTTGTAAAACCTGTTCAGCAGGTTCAAATCTGCTACAATTTGTATGCTTCGCGCAAATGCACCTTGAAAACTAAATATGATATACTTCACAAGCGCGGGCG # Right flank : ACTGTTTCGGCTCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAAAGCCTCTGAAACCCTTTTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 1 1755-608 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDHW01000249.1 Pseudanabaena sp. SR411 Contig_257, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 1754 37 100.0 37 ..................................... TGATAGCTATCAACGTAATCATCCTAATGAGTACAAA 1680 37 100.0 37 ..................................... GCAAGCAAATCGCTTGAATCATTTCTCTTCTATGCTT 1606 37 97.3 36 T.................................... TGACTGTTTCTTGTTCATCGCTTTAATACTCTTTAG 1533 37 100.0 35 ..................................... TAGTGCCTTGGAAATAATCAGGTTGATTTCTTTTT 1461 37 100.0 36 ..................................... ATACACGTTAGGCTTTAAACCTTGCATGAGTTTCAT 1388 37 100.0 35 ..................................... TGGGCCAGTCGGCATTGGTGTAGGTGCTGTTCTCG 1316 37 100.0 35 ..................................... ACAGAGATAATTCTGGTTAAAGATACATGTCTAGG 1244 37 100.0 39 ..................................... GCCTTCTTGAATAAGAAACCAAAATCTAACTTTCTTGGA 1168 37 100.0 39 ..................................... CGCCTATTTCGGAATCTTGCATAGCACTTACAGATAGAA 1092 37 100.0 37 ..................................... AATGTATAGCTAGCACCCATGCCAGAAGCAGGACGGT 1018 37 100.0 43 ..................................... TATCTAGCTGATTTGCCGTCTTGGCAAGCTGACGGGTACGAAA 938 37 100.0 39 ..................................... TTGGTACAAACTAAGCCGATCGCCTCAGCAGTTGACAAC 862 37 97.3 37 ...................................C. CCCCCGCAATTAGATTTTGATGCTGATTCTGTATGCT 788 37 100.0 35 ..................................... AAGGATGAGTTGATTATGCGGTTGCATGATGCTTT 716 37 100.0 35 ..................................... AAATGTCTTTTCACCAAGCCTGTAAAGCCCTGTAA 644 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 16 37 99.7 37 GCTTCAAAGCCTCTGAAACCCTTTTAGGGATTGAAAC # Left flank : GCCGCAAATACATTTGTTGCTGT # Right flank : CATAAGACAATAATAAAATCTGCATTTGCTGATTTGTAATTTCAGCCCAACTAAGTGTCAAGCGTAATTTGCTGTCTTTGAGATTTAAAGCAACTAATCTTGGCTCACGCAGATGCTCTAATGGCTCAATAGTCATGTCTTATGTAGCCTGTGTGCGGAGTTTTGGCTCTGAATCAATGGGGATCAGGCTCGCTTGTTTTAATTCTAAATCTAGAGATCGAGATCGGTAATATTGCAAATTTCCATCGTTACTCTGCATAGCATATATCGCATTAGGAAATACTTCACGATAAGCCTGTAGTAGCGATAGTTCTTCCAGTTCTTGAGCGGATGGTCATGGGTAAAGAGATCACCTTATTTTTCATTAAGTTGTAATGCTTTTTGATTGAGAAGTTCATCAGTAATATTGCCAGCGTTGCTGCCAAAGCGTTTTTTGACTTCACTGGCTGGAATCATGCTTTCACTTGCCACACAACGGGGAAGCTTACCGAGAATTGAGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAAAGCCTCTGAAACCCTTTTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA // Array 1 3297-6 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDHW01000081.1 Pseudanabaena sp. SR411 Contig_84, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 3296 37 100.0 35 ..................................... GGGTCTAAGCCTATGGTAGCGACTAAGATGAAGGT 3224 37 100.0 34 ..................................... ACTGTTTCGGCTCTGGATAAGTTGAAGGCTAAGG 3153 37 100.0 34 ..................................... GCAAGGCTTATAATCTGCGCGAAAATGCGGGTAA 3082 37 100.0 35 ..................................... TCAACTCAAGGATCGTCGGCAAATGCTCAGTATTT 3010 37 100.0 35 ..................................... ATAGGAACCAAGATAATCGGCTCTAAGCCTATGGT 2938 37 100.0 34 ..................................... CAAATCAAGGCTATAGGAAGGAGTTGTTTTTGGG 2867 37 100.0 35 ..................................... TCCCTAATACCGTAAGTATCGTAGAAGACCTCAAA 2795 37 100.0 35 ..................................... TAATCATCCTTCATGTACTCTGCGAACTTCACAGC 2723 37 100.0 34 ..................................... GCGATCGAAACCCCATTAACAACAAGATCAACAG 2652 37 100.0 37 ..................................... AACTTTTCTACACTTGGCAGATAGTCTGCGGCGATCG 2578 37 100.0 35 ..................................... GCAATCAAGCGCTGATTTTTCGCCAACTACGATCC 2506 37 100.0 40 ..................................... CCTACAACTTGCAAACTAGCCTTAACTGTTGGCGGCGCGG 2429 37 100.0 35 ..................................... ATAAATTTCGTTAAATATTCAAAAAATTATGATTA 2357 37 100.0 36 ..................................... GCAGTGTTGGCTCAGAAACGAGCGAACGAACTCCAT 2284 37 100.0 34 ..................................... GTATTGTTGAGCTTGAAAACGAGGTGCGATCGCT 2213 37 100.0 36 ..................................... TTGACGCAAGAGAGCGAAATTGTTGAACTCACAGAG 2140 37 100.0 35 ..................................... CCATATCTGCAAAGAAATTCTCAAACGATTCAAGC 2068 37 100.0 35 ..................................... GTAGATTCTGGGTTCCCTGTTGCGGAATGCGATCG 1996 37 100.0 36 ..................................... CAGTCATTTCCTTAATCCGTCCCTTAATTTCTTAAC 1923 37 100.0 35 ..................................... AAGAAATCAGCGATACTTTGCACTCCTTTTCTAAG 1851 37 100.0 37 ..................................... TTCGGGATATAAACCTTGATGATTGTCGTGTCTTTGG 1777 37 100.0 38 ..................................... AGCCGCCTTCGCCTCTGGCTGTGGTGAGAGCAACGATA 1702 37 100.0 35 ..................................... AGTATAATGCTCTATACAATAATCGTGGGTTTCTT 1630 37 100.0 36 ..................................... AGAGAGATCAATATAACTGCCTGTCATCTCAAGTCT 1557 37 100.0 34 ..................................... CAATGACGAGATCAACATTAAAGAGCTATTCAAG 1486 37 100.0 35 ..................................... AGGTGATATGTATCATCACGCTATTGACACAGAAT 1414 37 100.0 37 ..................................... TAGGAGATGCAGAGAAAGCATTCTTATATACTTGCAA 1340 37 100.0 34 ..................................... TGTTTGCAAGCGTAGTTACATCCTTGCTTTCTAT 1269 37 100.0 35 ..................................... CTGGCAAATTAGACTCATACAGGTTCGTATCCTGT 1197 37 100.0 36 ..................................... ATGCAAAGGGAAGGATTGGCGCAAAGCCCTAATAAG 1124 37 97.3 35 .T................................... ATCGCAAAGACCCAAAAGTATAGAACAAACTAAAA 1052 37 100.0 35 ..................................... TGCTGTAACCATGTACAAAATCAGAACAAACAGAG 980 37 100.0 34 ..................................... CTCAAGAGGTACTAGCTCAGCCATCCTACAACGA 909 37 97.3 35 A.................................... TGTCCATCCTGCTTTCTCTATCACTTGAAGATTAA 837 37 100.0 36 ..................................... TAATTATTGCATTATATGGATTTAAGGCACTAACCT 764 37 100.0 35 ..................................... TAGTGTCCTGTATAGAAAGTTGTAAGTAACCTCAG 692 37 100.0 34 ..................................... TTATCTTTCTTCAACGCCTTGCAAATCTGAGTTA 621 37 100.0 35 ..................................... AGAATTTCCGAAGTCAATTTATGACTATGTAAAAA 549 37 100.0 35 ..................................... CACTCAACCGCAGCAAGATCGATTCATTAAAGGAA 477 37 100.0 38 ..................................... ATATCCAAATTCTAGTAGTTAATAAAAAAGCGATCGCC 402 37 100.0 34 ..................................... TTTTTCTTATCCTCTATTCGAGTGCCACGATCAC 331 37 100.0 35 ..................................... ATTGCCAAACATAGCTAAGTGTAGAGTGTCACCAT 259 37 100.0 38 ..................................... ATGTTTTACCTTGCAAAAGTAAGGTAGAAAACTCTCAA 184 37 100.0 35 ..................................... TTTAATGTAGCCACAGGAGAGCAAGAAATAGTTGA 112 37 100.0 33 ..................................... AACATCAATAGTAAGTCTGCTCATAAACCACCA 42 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 46 37 99.9 35 GCTTCAAAGCCTCTGAAACCCTTTTAGGGATTGAAAC # Left flank : GCAAATATATTTCAGAAGATTT # Right flank : CCACTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAAAGCCTCTGAAACCCTTTTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //