Array 1 90587-87794 **** Predicted by CRISPRDetect 2.4 *** >NZ_QXOA01000046.1 Acinetobacter baumannii strain MC104 46, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 90586 30 93.3 30 ............................AG TCGGCACAGGTAGCAGTTGAGCAGTCATCG 90526 30 93.3 30 ............................GA GTTCTTTCATAACGTAGGCTTTAATGCCTG 90466 30 93.3 30 ............................AA CGTTTCCGCAAATCTGCGAAATACTCGTTG 90406 30 93.3 30 ............................AA TATAGTGGCATCTTCGAGAGTTAAAGGCGG 90346 30 96.7 30 ............................A. CAGAATTTTGTTTACAAGTTCTAAGCGGGA 90286 30 93.3 30 ............................AG TTTGAACATCTAATAATTGAGCTGTAATAC 90226 30 93.3 30 ............................GC CTCCAATTGATCCAATTGATCAACCTCCAT 90166 30 96.7 30 ............................A. ATGGTGGTTGTTATAAACCGCCTAATGATA 90106 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 90046 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 89986 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 89926 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 89866 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 89806 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 89746 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 89686 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 89626 30 93.3 30 ............................AG CCAACTTAATAGTAGAAAGGTAATGCCCTT 89566 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 89506 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 89446 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 89386 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 89326 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 89266 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 89206 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 89145 30 96.7 30 .............................A TAAGAAAAATGCAAAAAAGGCATTTATTAG 89085 30 96.7 30 ............................A. ACACATGTTTTTCTAATAAGAATAAGACAA 89025 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 88964 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 88904 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 88844 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 88784 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 88724 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 88664 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 88604 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 88544 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 88484 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 88424 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 88364 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 88304 30 96.7 30 ............................A. AAAGCGCACAACCCATTGATTTGTATTTTT 88244 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 88184 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 88124 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 88063 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 88003 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 87943 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 87883 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 87823 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 47 30 95.0 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.21, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //