Array 1 149622-148334 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEMHW010000001.1 Streptococcus vicugnae strain SL1232 NODE_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 149621 36 100.0 30 .................................... GGTCTACTAAACCAGCGACTGTCACAGCAG 149555 36 100.0 30 .................................... CTGTTAGTAGCATGGCTAGCAAGCTAGGCT 149489 36 100.0 30 .................................... ATATGAGTTTATTAGATATTGCAAAAGGAC 149423 36 100.0 30 .................................... ATATGAGTTTATTAGATATTGCAAAAGGAC 149357 36 100.0 30 .................................... CTCGTCAAGTGATTTCTCAATATGAGCTTG 149291 36 100.0 30 .................................... GAGTTCTTCAATATCAAAGATTGGAAACTT 149225 36 100.0 30 .................................... GTGACAGTAGGCAGCGACATCTACACAGCG 149159 36 100.0 30 .................................... AATACGACGAAGCAGACGGCTATATCGACC 149093 36 100.0 30 .................................... GGACGCGTTATGTTGTCTCTGGAACTATCA 149027 36 100.0 30 .................................... CACATACAAGCGTATTGTCATTAACATCTA 148961 36 100.0 30 .................................... TTTAGTACTCTAAAATCGTCTGTAGTCAAC 148895 36 100.0 30 .................................... TTAAGGCTTACGATGTTAAGAATATTTCTA 148829 36 100.0 30 .................................... CAATGTTTATGATCAACAAACAACTTGCTA 148763 36 100.0 30 .................................... TCATCTGGTTAATTATCAGCGCAGCCGAAA 148697 36 100.0 29 .................................... CTTTTTTTAGTTTTGTGGTTATAACGACA 148632 36 100.0 30 .................................... GGTTTACAAATTGGACCGTCTAAGCCGTAG 148566 36 100.0 30 .................................... TTTATGAGAAGCATTGAAGTAGTACTCGAT 148500 36 100.0 30 .................................... TGGTCTACTAAACCAACAACTGTCACAGCA 148434 36 100.0 30 .................................... AAGACATTTCAACAGTAACACCAACTGGCT 148368 35 83.3 0 ....................A..A-...AC.G.... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.2 30 GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Left flank : ATGGATGATTACCTTGATTATGCCTCATTTATAAGAATTTGTCAGGTTATCACAAGAATGACTGAGGAGTTTCCAAATTTTTATTGTACGATTTTTCCGTCAAACGAAAGCTACTTGTATGTGACTAAAGAAACAATAGAAAATATTACCATTGTTTCAGATTATATTGAATCTTTGTTTGATCTTAATTTTATGTATGAAAGATTTGTTGGAAGATATCCATCCAACAATGTACCAACAAAAAAAGAATTTTTAATTCTTTTACAGAAGAATGCAAGTTATTTATTTAGTGAGCAAATTTCATATGTGAGTTTAGGAATTTCGGATATGGTAGCTATCAAGATACTAAATAGTTTATATCACTATGATAAGTCAGTTAAATATCCAATTTCAGAGATAAATCAGCTTGAAATAAGCTTTCTTAAGGATAAAGATTGACTTTTAGGCTCAATGAAATTATAATTCTTGTAGAGTATAAAGACCAAAAATGACGATTTGAG # Right flank : ACCAAAACCACCTAGAAATTTCCAGGTGGTTTTTCCTATATGGGTCATAGGTTTGCTAGGTTAGATTGGCTTAGTCATTCAGATGGTCGATGGCATACTGAGCTTCTTCGGTGGTGAATTTTGCGCCGTGCTCAGAAGTGAGTTGTTCGTAGATTTCATCTGATGACAAGTCTAGTGTTTTCTTATAACTTTTTGCTTTTTCCAAGGCAGCTTTCTTATAGTCTAATTTGGCATGGTCGATAGCGTACTGAGCTTGTTCAGCAGTGAATTTATCGCCATTTTCGTTAGACAATTGGTCGTAGATGCCTTGTTTTGACATGTGCATAATCTTGTAATAGCTCTTTGCTCTCTTAAGCGCAGCTTTTTTGTAATTAGCTTTCAAATGGTCAACGGCATATTGAGCATCTTCGGCAGAATATTTTTCAACATCTGATGTCAATTGGTCGTAAATGCCTAATTTTGACATGTTCATGAGCTTGTAGTACTTTTCAGCCTTGCTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //