Array 1 66500-66800 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZJ01000010.1 Streptococcus halichoeri strain P994 NODE_10_length_66891_cov_99.455874, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 66500 36 100.0 30 .................................... AATCAAAATTTCTATATCACTTTTATCAGA 66566 36 100.0 31 .................................... CTGTCACTATCACCGCTAACAGCGAGCGTCA 66633 36 100.0 30 .................................... CGCTATCTTTATATCTTGGTTTTTCGTTAG 66699 36 100.0 30 .................................... ACGCAAGCGTGATTAATGCTAAGCGAAAGG 66765 36 86.1 0 .............................TTG..CG | ========== ====== ====== ====== ==================================== =============================== ================== 5 36 97.2 30 GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC # Left flank : GCTATCGTTCGCGGGGAAGGGCTCACGCGGATGAAAGGATGTAAATGTTCCTTTAAAAGCTATGCTGTGCTTAAAACCAGTCAGATAGTTCAAGTTAGCCAAATTTAAAGAATAGTGATGTGATAGGTAAAGGGGAAATGAGTGAGGCGGACCGTAAATTAGGCGATTTTTACTGTGCTTATCAAGGTAAAAATCGCTCATGCTCCGCCAATTAACCGTAGAGCTGCCGCAGAGAGAATAAAACAAAGGTGGATTCTCAAAATCAGTCCGCCTAGAAATTAATCTGAGAAAGCTGAAAAGCAGGGCAGAATTTTTGCTTACTACAGCAACTAACCCCAATATTGTTTGAGACTTAATCGGCCGCCAAAAACTTCTTAAGCCAATTGATTTCATAAGGTTTTTGCCGTATAATAGTGCTATGAACGGACGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : AAGTGTTAGCTCCGCCTTTCCCCTTTTGATTGCTAAAACTAAAAATAAATTTGAATCATTCCCGTAGTTAGTTATTCCATAGCCATCATAG # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/B/C [Matched known repeat from this family], // Array 1 33847-34344 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZJ01000023.1 Streptococcus halichoeri strain P994 NODE_23_length_34705_cov_131.746660, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 33847 36 100.0 30 .................................... AAGGTTATTATACTATCGAAAAACAGATGG 33913 36 100.0 30 .................................... CTTCTGTACTAGGTATTAATAATCCTTGGG 33979 36 100.0 30 .................................... AAGGTTATTATACTATCGAAAAACAGATGG 34045 36 100.0 30 .................................... GCCGATAATTATCGGAAATTTTAGAGGTTG 34111 36 100.0 30 .................................... CATTGTGGCTAAGAAACGAGGAATGCGAAG 34177 36 100.0 30 .................................... TAATCAAGTCAGAGGAATGTTGCATACGAG 34243 36 94.4 30 .T............C..................... GATTGGTACGAAAAGAATAAAGAAGGCCTT 34309 36 80.6 0 .T............C..............TTG..CG | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 96.9 30 GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : AACTAGCAACAGACCAAACGTTAATCTCTCGAAAAGTCCGTTGAAGCATCCCAGTAAGCAGTAAAAACTGAGAATATAAGAGCATATAAATTGCTTTGGGGATCGATACAGTGTCTTAGACCATAGTTCAAAGCAAGTATTTGTCATCCCCCGAATAGACAGAAAAAAAAGAGTCACGCTATCCAATCGTTCATATTTCTCCTGATAAATCGATTGCTGCCATCAATCAAGCCAAGCATTTGGAATACAAAACACCAGCCAAATGCTAGCATAGCAGCTGAGGAATCAGAGATTAGAGGCTTAATAAAAATTTTTGAACCTAAACTGAAAAGGTACTGACGATTAATCAGCCGACAACCATGATAGTTAGCCTTCTTAACGCATTGATTTCGCAAGAATTTTGCCGTATAATAGTGCTATGAAAGGACGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : AAGTGTTAGCTCCGCCTTTCCCCTTTTGATTGCTAAAACTAAAAATAAATTTGAAAATGTACCTTTGTCAATGATGTGAGACCAAAACAGGGATTGAAAGAAACTGAATATGCTATTCTCTAGAAGGAGCTAGCTGCTTCTAGTTTTTTTCTTGTTTCGATGGGTGAGAGCCAGTCAAGGGTCTGCATGGGTAGTCGATTGGACTTGTAGAGGTAGCGCTCCATTTGCTTAATAAGATCGTCGTAGGAGTAGAATTGGAGATGTTGGTAGAATCGCATGTTGTCATTGCGATGACTCCTTTCGACTTTTCCATTATGTCTTGGCGTCCTAGGTCTGATACACTTATGTTCAATGCCGATCT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 96627-96926 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZJ01000007.1 Streptococcus halichoeri strain P994 NODE_7_length_97105_cov_128.778878, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 96627 36 100.0 30 .................................... AAACTAGTAGTGCCAAAGTTTGTGGCGGAT 96693 36 100.0 30 .................................... TTTGCTTCTTCAGCAAGCTCTATTGGCACT 96759 36 100.0 30 .................................... AAACGACAACACACGATCTAATGAATTAGT 96825 36 100.0 30 .................................... AAACAAAAGTGGAGCAAGAATTTAATAAAT 96891 36 80.6 0 .T............C..............TTG..CG | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 96.1 30 GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : CTAGCAGCAACTATAACAGAATTAATCGCCTTTGAATGTCTAGAGAACGAATTGGACTTGGAATATGATGAGATTACTATCTTGGAACTTATAAAGGCTTTAGGGGTTAAGGTGGAAACACAGAGTGATACTATTTTTGACAAGTGTTTGGAGATTTTACAAGTTTTCAAATACCTGTCTAAAAAGAAACTCTTAATTTTTGTGAATTGCGGCTCCTATCTTACCAAAGAAGAACTCTTGAAGCTGAGAGAGTATATTGAATTATCTCAGCAAACGGTCCTCTTATTAGAGCCAAGAAGTTTGTACGATATTCCGCAATATGTTCTAGATGAAGACTATTTTTTGATAGCAGAAAACATGCCATAGTCTAGCTTCTAAAAACCTTGATTTCATAAGGCTTTTGCCGTATAATAATGCTATGAAAGGGCGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : AAGTGTTAGCTCCGCCTTTCCCCTTTTGATTGCTAAAACTAAAAATAAATTTGAATCATTCCCGTAGTTAGTTATTCCATAGCCATCATAGCTTTTCAAACCCTCAAAAAGAAAAATCGCCACGTTAAGTAGCGATTTTTCCCTTTTGTGAGCCTCAATGAAACGTCAAAGCGTTATAA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //