Array 1 1211448-1210220 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANJ010000001.1 Vibrio metschnikovii strain M7C.1 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1211447 28 100.0 32 ............................ CATCGTTACCGACCATGATTTTTTCGGGATGG 1211387 28 100.0 32 ............................ ACGTCTTTAAGTGCTACTTTTGAGTACTTATG 1211327 28 100.0 32 ............................ AAACAATCGATTCACTATCTTTGTGGCCAAGC 1211267 28 100.0 32 ............................ TTACTGATATTACGTGCTTAACAGCCTGAGCA 1211207 28 100.0 32 ............................ CAACAAACATCGTTTGTACTGATGAGTCATGC 1211147 28 100.0 32 ............................ AAACAAGGATACTTCTCCAGATGAAGAAAATC 1211087 28 100.0 32 ............................ GTACATTGGCGAACCGCTAGGAACTACACCAC 1211027 28 100.0 32 ............................ GCTGTCCCATTGTTTGACTGTTCTCACACTTT 1210967 28 100.0 32 ............................ ATCACAGTAAGGACGCTATCAAATTCCGCGAC 1210907 28 100.0 32 ............................ TATTGCTAATTCGGTAATATCCATACATCCCC 1210847 28 100.0 32 ............................ TTTTGCGTTCATGACCTTGTAAAGAACCATGT 1210787 28 100.0 32 ............................ TCGATGCCTTTCTTCCCAGTCATCGCGGATTG 1210727 28 100.0 32 ............................ CAATAATACGCTTTTGATGGCGACGCAGTAAC 1210667 28 100.0 32 ............................ AATCATCGTTGTAAAACTTAACAACAACATCA 1210607 28 100.0 32 ............................ CAATTCATTTACCCTGTCCCGATATGGCGGGG 1210547 28 100.0 32 ............................ ACTTTTTGGCGGTCGCGTTGCCACCTTTGCGG 1210487 28 100.0 32 ............................ TGAAACCTGTCTGCAACTGGTACTTGGTTTGA 1210427 28 100.0 32 ............................ TTCGCGAATTACTTCTTGACCGATGTTGTAGT 1210367 28 100.0 32 ............................ TGCCATTTTTGTGGCTACAGCATCGTTATATT 1210307 28 100.0 32 ............................ AAATATCCAAGAATTATCAATAGTTACCCTTG 1210247 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 21 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGATGTGACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAGCGAATAGAGCGGGATATGCAGCAAAAAGCCGCGCTATGGGCCGAAAAATCCGGTAAAACGCTGGTGGAATGCCTAGCCGATTTGCAACAAAGCAAGCCGACAGCCTTATGCTCTTTACCGTTTATTTACTTGCATAGCCAGCAAACGAAGCAGCGCTCTCCTGAAAAAAGCAGTAAGTTCCCGCTGTTTATTCAGATGCAGCAACAAAGCACATCGCAAGACGGGGCCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGACAATCAGCATTGGCAACCGTCCCGTATTTTTAAATTGAACGAAAAAGGGTATTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTAAATACAATAAGTTACAAAGGGTGGTTTTTTATAAGGTAAAAATGCAATTTTTATCCTAACTAACTGTTGTAACTTATTTTTATTGATTTATTCTATA # Right flank : CGCCGGATTCGATGGAATCAAACTCCCGCCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACAGATGCCAAGTGCTTAAGTGAGCGATCAATTGGCCACAGATTACTGATACTTCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTGGCTGTGGTTTTGGGAGCTGAACTCCATAGATCCCCGTCATGTTTTGCCTGCTACTGCTGTGAGGCAGGGAAATCAAGGCGTAGCGATCATCGAAAACTGATCCACTAAATACACTTAGTCAGCATAGATTCCCACCTTGAGGGCAATGATGCTTGACGCTTTGAATACTCGATTGTTCACCTTGATTACAAGAAAGCGTGAGTTGTTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAACACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 275-722 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANJ010000025.1 Vibrio metschnikovii strain M7C.1 Scaffold25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 275 28 100.0 32 ............................ TTGCCGGAAGTTGAAGTCTTGCTGGTAGGTCG 335 28 100.0 32 ............................ AGCAATCAAAAACACCGCCACAAATGCAATTA 395 28 100.0 32 ............................ TATCGTATTTTTTGCACAAAAGCATAGTTAAG 455 28 100.0 32 ............................ AAATTATGTTACGGGCTTCGCTAGCAAAGCGA 515 28 100.0 32 ............................ TAGATTGTGTAGGCGTGCCAAGTGGGTTTTAC 575 28 100.0 32 ............................ TTAGCTTTCGATTTAGCGTGGTATGCGTAGCT 635 28 100.0 32 ............................ CCGAAATTAAAAAGCATTTCGAAGCGTCTTTT 695 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.1 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TCTAAACATAACAAACAATTCAAGCAGACCCTCAACGCGTGGCATTTTCGTTTTGCGTTGAGTTTTGTGATTACGGTGTTCTGCGGGAAGTTAGTAGTTGCGTTTCGGGCTACTTAATTGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCATAG # Right flank : AATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTATGCTTTATTGAGCCTCAGAAAAATCAATATATAAATTTTAATGGGAAATCTTGGTCTGATTTAGAAGTTTTCCTATTCTAATTTATTGATATTATAAGTTTATTGTTCTTTTTCGTGGCTATTGAAAGTTGAACGAGGCTTCTGTTTTTTCGGCAACTCTGCTCTGATAAATTGTGTACGCAAAAGGTTCGATTTTTGCTGAAAGGTCTCTTCCTTTGTTGTTGCTTGTTCATTGATTCTATCGGCTATTTCGCTTCAGCATGTTTGGGATTTCATTGGTATCTTGCTTGCTGACAGTGTTTGGTTAGTTCAAGTTTATCGATGATTTTACGCTTTTTTCCGGCTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2614-3121 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANJ010000013.1 Vibrio metschnikovii strain M7C.1 Scaffold13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2614 28 100.0 32 ............................ AAAAGCAAGCATCTTGTAACCAAGTCGGCAAT 2674 28 100.0 32 ............................ TTTGGCTTCAACCATTGCAATGATGCGCTCCG 2734 28 100.0 32 ............................ TTCGATGGAGCAGCCGCCGATAATTGGGGGAC 2794 28 100.0 32 ............................ AATGAGCTTGAGTGAGAGAGTTCAGGCAGCGC 2854 28 100.0 32 ............................ TGCCGGTGCAAACCAAGCCAAGTTAGATTTAA 2914 28 100.0 32 ............................ TAATGCTTCAACAGGATGCAACTCAGGCTGGC 2974 28 100.0 32 ............................ TTGCCAACTAAATCAGTATAATCAATAAGTAA 3034 28 100.0 32 ............................ TGTGGAGGCTGGGGAGTCAGTCGCAGCTAGGC 3094 28 89.3 0 ........T....C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 9 28 98.8 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : AGATGTTCTACTCGGAAAGTTTGGTTTCACAAAAGGCAGCATCATCGCTGTGATCTTGCTTTCTTTGTCGCGGACCCTTAACCGTGGCCAACTTAACCTTTATTGTTTTGAGTTTTGGCAGTCAACTTCACAGCTTTTGGCGTTGGACGTGTGCTTGTTCGATGCATTTGCGTAAAATGACTTTCAAGCAAAAGTGTTAAAAGTCATTGCTAAACAATAGGCTACGAAACTAACAAACGCCTCAAGAGGGACTGTCAACGCGTGGCGTTTCCAGTCCCAATGAGCCGTGGTGGTTGCAGTTGTTGTGTTTGAGTTTGGTTGTTATGCGTTGTCAGCCCCTTAGGCGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCATT # Right flank : AATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTGGCATTTTCGTTATGCTTTGATTTTATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCGGCGTTATGCTTTATTGAACCTCAGCAAAATCAATATATAAATTTTAATGGGAAAAATCAGTCTTATTTAGAGGTTTTACATTCTAATTTATTGATATTATTAGTTTATTTTTCTTTTTGGTGGCCATTGAAAGTTGAACGAAGCTTGTGTGTTTTTGTCGGGTATTGCTCTGATAAATTGTGTGCGCAAAAGGTTCAATTGTTGCTGAAAAGTCTCTTTCTTTGGTGCTGCTGGCTCATTGATTCCGCAGGCTATTTCGCTTCAGCATGTTTGGGATCTCATGAACACCTTACTTGCTGACAGTGTTTGGTTAGTTCAAGTTTATCGATGATTTTGCGCTTTTTTCCGGCTC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGCATAGGCAGCTTAGAAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 240-447 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANJ010000082.1 Vibrio metschnikovii strain M7C.1 Scaffold82, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 240 28 100.0 32 ............................ AAACTAATGATTTTCTTGAATGGCGTTTTGAT 300 28 100.0 32 ............................ ATGTGCGCTTCATCAATGACGAAAAGCGGCCC 360 28 100.0 32 ............................ TTTTAATGAGCGAGTAAGGACAGGAGCAAAAG 420 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 98.2 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : CGCGCAGCATTTTCATTATGCGTTGATTTCTGTGGTTTCAGTGTTGTGCGGAAACTTGGTAGTAGCGTTGTCAGCCCCTTAAGTGGGCGTTAACTGGCAATGAAATTCCCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCATAG # Right flank : ATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTATGTGTTTTTGAGTTTACAAAAGGAGATTTGTAGTGAAGGTTTATGGAGACATCCAATCTGGGAACTGTTACAAAGCCAAGCTGTTGCT # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //